RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 K7ERS5 55 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
PTPRO-202ENST00000348962 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
PTPRO-202ENST00000348962 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
PTPRO-202ENST00000348962 F8P00451 2351 aa10.99□□□□□ -0.65
PTPRO-202ENST00000348962 ADAMTS20P59510 1910 aa10.99□□□□□ -0.65
PTPRO-202ENST00000348962 NDUFC2O95298 119 aa10.99□□□□□ -0.65
PTPRO-202ENST00000348962 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
PTPRO-202ENST00000348962 CIRBP-AS1Q8TBR5 109 aa10.98□□□□□ -0.65
PTPRO-202ENST00000348962 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
PTPRO-202ENST00000348962 EXPH5Q8NEV8 1989 aa10.97□□□□□ -0.65
PTPRO-202ENST00000348962 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
PTPRO-202ENST00000348962 Q8N9L7 120 aa10.96□□□□□ -0.65
PTPRO-202ENST00000348962 CENPFP49454 3210 aa10.96□□□□□ -0.66
PTPRO-202ENST00000348962 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
PTPRO-202ENST00000348962 Q6JHZ5 121 aa10.94□□□□□ -0.66
PTPRO-202ENST00000348962 AMELXQ99217 191 aa10.94□□□□□ -0.66
PTPRO-202ENST00000348962 UQCRQO14949 82 aa10.94□□□□□ -0.66
PTPRO-202ENST00000348962 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
PTPRO-202ENST00000348962 ATG2AQ2TAZ0 1938 aa10.93□□□□□ -0.66
PTPRO-202ENST00000348962 MRPL55Q7Z7F7 128 aaKnown RBP10.93□□□□□ -0.66
PTPRO-202ENST00000348962 KRTAP24-1Q3LI83 254 aa10.92□□□□□ -0.66
PTPRO-202ENST00000348962 Q6ZSN1 163 aa10.92□□□□□ -0.66
PTPRO-202ENST00000348962 LINC01561Q8N1V8 128 aa10.92□□□□□ -0.66
PTPRO-202ENST00000348962 MDFIQ99750 246 aa10.91□□□□□ -0.66
PTPRO-202ENST00000348962 MT-ATP8P03928 68 aa10.9□□□□□ -0.66
PTPRO-202ENST00000348962 PRYO14603 147 aa10.89□□□□□ -0.67
PTPRO-202ENST00000348962 Q8N814 137 aa10.89□□□□□ -0.67
PTPRO-202ENST00000348962 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
PTPRO-202ENST00000348962 SERP1Q9Y6X1 66 aa10.89□□□□□ -0.67
PTPRO-202ENST00000348962 FAM236DA0A1B0GTK5 79 aa10.88□□□□□ -0.67
PTPRO-202ENST00000348962 FAM236CP0DP71 79 aa10.88□□□□□ -0.67
PTPRO-202ENST00000348962 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
PTPRO-202ENST00000348962 IMUPQ9GZP8 106 aa10.88□□□□□ -0.67
PTPRO-202ENST00000348962 CELA1Q9UNI1 258 aa10.88□□□□□ -0.67
PTPRO-202ENST00000348962 Q9BRP9 147 aa10.87□□□□□ -0.67
PTPRO-202ENST00000348962 NDUFC1O43677 76 aa10.87□□□□□ -0.67
PTPRO-202ENST00000348962 ANKRD17O75179 2603 aaKnown RBP10.87□□□□□ -0.67
PTPRO-202ENST00000348962 Q6ZRU5 148 aa10.87□□□□□ -0.67
PTPRO-202ENST00000348962 SPTSSBQ8NFR3 76 aa10.86□□□□□ -0.67
PTPRO-202ENST00000348962 AGRNO00468 2067 aa10.86□□□□□ -0.67
PTPRO-202ENST00000348962 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
PTPRO-202ENST00000348962 MUC4Q99102 2169 aa10.85□□□□□ -0.67
PTPRO-202ENST00000348962 URB1-AS1Q96HZ7 61 aa10.85□□□□□ -0.67
PTPRO-202ENST00000348962 Q6ZVQ6 151 aa10.85□□□□□ -0.67
PTPRO-202ENST00000348962 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
PTPRO-202ENST00000348962 ESRGQ1W209 222 aa10.83□□□□□ -0.68
PTPRO-202ENST00000348962 SERP2Q8N6R1 65 aa10.83□□□□□ -0.68
PTPRO-202ENST00000348962 H3BNG1 76 aa10.82□□□□□ -0.68
PTPRO-202ENST00000348962 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
PTPRO-202ENST00000348962 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
PTPRO-202ENST00000348962 SBSPONQ8IVN8 264 aa10.81□□□□□ -0.68
PTPRO-202ENST00000348962 LIMD2Q9BT23 127 aa10.81□□□□□ -0.68
PTPRO-202ENST00000348962 V9GYY9 64 aa10.81□□□□□ -0.68
PTPRO-202ENST00000348962 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
PTPRO-202ENST00000348962 ADAMTSL4-AS1Q5T5F5 129 aa10.8□□□□□ -0.68
PTPRO-202ENST00000348962 EML5Q05BV3 1969 aa10.8□□□□□ -0.68
PTPRO-202ENST00000348962 CPAMD8Q8IZJ3 1885 aa10.8□□□□□ -0.68
PTPRO-202ENST00000348962 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
PTPRO-202ENST00000348962 A0A087WSZ3 146 aa10.8□□□□□ -0.68
PTPRO-202ENST00000348962 C22orf24Q9Y442 160 aa10.79□□□□□ -0.68
PTPRO-202ENST00000348962 LINC00310P59036 64 aa10.79□□□□□ -0.68
PTPRO-202ENST00000348962 MPLKIPQ8TAP9 179 aa10.79□□□□□ -0.68
PTPRO-202ENST00000348962 GOLGB1Q14789 3259 aaKnown RBP10.79□□□□□ -0.68
PTPRO-202ENST00000348962 SVIPQ8NHG7 77 aa10.78□□□□□ -0.68
PTPRO-202ENST00000348962 PRLHP81277 87 aa10.78□□□□□ -0.68
PTPRO-202ENST00000348962 BRK1Q8WUW1 75 aa10.78□□□□□ -0.68
PTPRO-202ENST00000348962 SNURFQ9Y675 71 aa10.77□□□□□ -0.69
PTPRO-202ENST00000348962 PRR4Q16378 134 aa10.77□□□□□ -0.69
PTPRO-202ENST00000348962 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
PTPRO-202ENST00000348962 A0A087WYN8 130 aa10.76□□□□□ -0.69
PTPRO-202ENST00000348962 X6R8D5 127 aa10.76□□□□□ -0.69
PTPRO-202ENST00000348962 SMCR5Q8TEV8 140 aa10.75□□□□□ -0.69
PTPRO-202ENST00000348962 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
PTPRO-202ENST00000348962 A0A096LNJ9 63 aa10.75□□□□□ -0.69
PTPRO-202ENST00000348962 IGHV3OR16-9A0A0B4J2B5 98 aa10.75□□□□□ -0.69
PTPRO-202ENST00000348962 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
PTPRO-202ENST00000348962 LINC00208Q96KT6 92 aa10.74□□□□□ -0.69
PTPRO-202ENST00000348962 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
PTPRO-202ENST00000348962 HECTD1Q9ULT8 2610 aa10.73□□□□□ -0.69
PTPRO-202ENST00000348962 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
PTPRO-202ENST00000348962 LINC00575Q6W349 94 aa10.73□□□□□ -0.69
PTPRO-202ENST00000348962 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
PTPRO-202ENST00000348962 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
PTPRO-202ENST00000348962 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
PTPRO-202ENST00000348962 NBDYA0A0U1RRE5 68 aa10.71□□□□□ -0.7
PTPRO-202ENST00000348962 LINC00315P59091 139 aa10.7□□□□□ -0.7
PTPRO-202ENST00000348962 IGLV5-39A0A0G2JS06 123 aa10.69□□□□□ -0.7
PTPRO-202ENST00000348962 COX7CP15954 63 aa10.69□□□□□ -0.7
PTPRO-202ENST00000348962 A8MTW9 85 aa10.68□□□□□ -0.7
PTPRO-202ENST00000348962 USP24Q9UPU5 2620 aa10.68□□□□□ -0.7
PTPRO-202ENST00000348962 COL4A2P08572 1712 aa10.67□□□□□ -0.7
PTPRO-202ENST00000348962 TRAV7A0A075B6U4 112 aa10.67□□□□□ -0.7
PTPRO-202ENST00000348962 C16orf90A8MZG2 172 aa10.67□□□□□ -0.7
PTPRO-202ENST00000348962 LINC00167Q96N53 147 aa10.67□□□□□ -0.7
PTPRO-202ENST00000348962 Q8NAQ8 132 aa10.66□□□□□ -0.7
PTPRO-202ENST00000348962 A6NED7 52 aa10.65□□□□□ -0.7
PTPRO-202ENST00000348962 RETNLBQ9BQ08 111 aa10.65□□□□□ -0.7
PTPRO-202ENST00000348962 XGP55808 180 aa10.64□□□□□ -0.71
PTPRO-202ENST00000348962 Q8N3U1 123 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms