RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 CPAMD8Q8IZJ3 1885 aa13.36□□□□□ -0.27
UBE3C-201ENST00000348165 ANKRD17O75179 2603 aaKnown RBP13.35□□□□□ -0.27
UBE3C-201ENST00000348165 ZNF580Q9UK33 172 aa13.35□□□□□ -0.27
UBE3C-201ENST00000348165 FHL2Q14192 279 aa13.35□□□□□ -0.27
UBE3C-201ENST00000348165 A6NED7 52 aa13.35□□□□□ -0.27
UBE3C-201ENST00000348165 C9orf116Q5BN46 136 aaPredicted RBP13.35□□□□□ -0.27
UBE3C-201ENST00000348165 SPINK6Q6UWN8 80 aa13.35□□□□□ -0.27
UBE3C-201ENST00000348165 CHCHD7Q9BUK0 85 aa13.34□□□□□ -0.27
UBE3C-201ENST00000348165 ZNF73O43830 326 aaPredicted RBP13.34□□□□□ -0.27
UBE3C-201ENST00000348165 TET2Q6N021 2002 aaPredicted RBP13.33□□□□□ -0.27
UBE3C-201ENST00000348165 SMIM1B2RUZ4 78 aa13.33□□□□□ -0.28
UBE3C-201ENST00000348165 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
UBE3C-201ENST00000348165 COX6A2Q02221 97 aa13.32□□□□□ -0.28
UBE3C-201ENST00000348165 COX17Q14061 63 aa13.32□□□□□ -0.28
UBE3C-201ENST00000348165 DHRS4-AS1Q9P1J3 65 aa13.31□□□□□ -0.28
UBE3C-201ENST00000348165 Q6ZSN1 163 aa13.31□□□□□ -0.28
UBE3C-201ENST00000348165 AGRNO00468 2067 aa13.31□□□□□ -0.28
UBE3C-201ENST00000348165 COX8CQ7Z4L0 72 aa13.3□□□□□ -0.28
UBE3C-201ENST00000348165 F8P00451 2351 aa13.29□□□□□ -0.28
UBE3C-201ENST00000348165 SEC61GP60059 68 aa13.28□□□□□ -0.28
UBE3C-201ENST00000348165 PMAIP1Q13794 54 aa13.28□□□□□ -0.28
UBE3C-201ENST00000348165 TRAV7A0A075B6U4 112 aa13.28□□□□□ -0.28
UBE3C-201ENST00000348165 SOSTDC1Q6X4U4 206 aa13.27□□□□□ -0.28
UBE3C-201ENST00000348165 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.29
UBE3C-201ENST00000348165 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
UBE3C-201ENST00000348165 PRR4Q16378 134 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 CDIP1Q9H305 208 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 TSPEAR-AS2P59090 65 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 C6orf223Q8N319 242 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 A0A087WVE0 104 aa13.26□□□□□ -0.29
UBE3C-201ENST00000348165 NUPR2A6NF83 97 aa13.25□□□□□ -0.29
UBE3C-201ENST00000348165 WFDC13Q8IUB5 93 aa13.24□□□□□ -0.29
UBE3C-201ENST00000348165 MUC4Q99102 2169 aa13.23□□□□□ -0.29
UBE3C-201ENST00000348165 A0A096LNJ9 63 aa13.23□□□□□ -0.29
UBE3C-201ENST00000348165 TRBV10-3A0A0K0K1G6 114 aa13.22□□□□□ -0.29
UBE3C-201ENST00000348165 CASC2Q6XLA1 102 aa13.22□□□□□ -0.29
UBE3C-201ENST00000348165 LINC00474Q9P2X8 69 aa13.22□□□□□ -0.29
UBE3C-201ENST00000348165 ZNF706Q9Y5V0 76 aaPredicted RBP13.22□□□□□ -0.29
UBE3C-201ENST00000348165 MUC7Q8TAX7 377 aa13.22□□□□□ -0.29
UBE3C-201ENST00000348165 AMELXQ99217 191 aa13.21□□□□□ -0.29
UBE3C-201ENST00000348165 PRO0628Q9UI54 55 aa13.21□□□□□ -0.29
UBE3C-201ENST00000348165 ADAMTS20P59510 1910 aa13.21□□□□□ -0.29
UBE3C-201ENST00000348165 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.3
UBE3C-201ENST00000348165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.21□□□□□ -0.3
UBE3C-201ENST00000348165 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
UBE3C-201ENST00000348165 UTRNP46939 3433 aa13.2□□□□□ -0.3
UBE3C-201ENST00000348165 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
UBE3C-201ENST00000348165 LYPD5Q6UWN5 251 aa13.18□□□□□ -0.3
UBE3C-201ENST00000348165 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
UBE3C-201ENST00000348165 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
UBE3C-201ENST00000348165 PRR15LQ9BU68 103 aa13.17□□□□□ -0.3
UBE3C-201ENST00000348165 NTM-AS1Q6ZSK4 140 aa13.16□□□□□ -0.3
UBE3C-201ENST00000348165 Q8N2B8 174 aa13.15□□□□□ -0.31
UBE3C-201ENST00000348165 A0A1B0GUV1 79 aa13.14□□□□□ -0.31
UBE3C-201ENST00000348165 TRBV7-7A0A0K0K1E9 115 aa13.14□□□□□ -0.31
UBE3C-201ENST00000348165 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
UBE3C-201ENST00000348165 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
UBE3C-201ENST00000348165 Q8N814 137 aa13.11□□□□□ -0.31
UBE3C-201ENST00000348165 C11orf72Q8NBR9 251 aa13.11□□□□□ -0.31
UBE3C-201ENST00000348165 CELA1Q9UNI1 258 aa13.11□□□□□ -0.31
UBE3C-201ENST00000348165 IGLV5-52A0A0A0MRZ9 124 aa13.1□□□□□ -0.31
UBE3C-201ENST00000348165 FAM30AQ9NZY2 134 aa13.1□□□□□ -0.31
UBE3C-201ENST00000348165 MGAM2Q2M2H8 2515 aa13.1□□□□□ -0.31
UBE3C-201ENST00000348165 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
UBE3C-201ENST00000348165 A0A087WYN8 130 aa13.09□□□□□ -0.31
UBE3C-201ENST00000348165 PRYO14603 147 aa13.09□□□□□ -0.31
UBE3C-201ENST00000348165 K7ERS5 55 aa13.09□□□□□ -0.31
UBE3C-201ENST00000348165 FHL3Q13643 280 aa13.09□□□□□ -0.31
UBE3C-201ENST00000348165 C10orf25Q5T742 122 aa13.08□□□□□ -0.32
UBE3C-201ENST00000348165 C1orf137Q5JT78 98 aa13.07□□□□□ -0.32
UBE3C-201ENST00000348165 PSPHP1O15172 72 aa13.06□□□□□ -0.32
UBE3C-201ENST00000348165 Q8N9L7 120 aa13.06□□□□□ -0.32
UBE3C-201ENST00000348165 RPS28P62857 69 aaKnown RBP13.05□□□□□ -0.32
UBE3C-201ENST00000348165 Q6ZRU5 148 aa13.05□□□□□ -0.32
UBE3C-201ENST00000348165 TRBV7-6A0A0J9YX20 115 aa13.05□□□□□ -0.32
UBE3C-201ENST00000348165 Q8N3U1 123 aa13.05□□□□□ -0.32
UBE3C-201ENST00000348165 LINC01556Q5JQF7 62 aa13.04□□□□□ -0.32
UBE3C-201ENST00000348165 A8MTW9 85 aa13.04□□□□□ -0.32
UBE3C-201ENST00000348165 CRYGAP11844 174 aa13.04□□□□□ -0.32
UBE3C-201ENST00000348165 CIRBP-AS1Q8TBR5 109 aa13.04□□□□□ -0.32
UBE3C-201ENST00000348165 C1orf134Q5TEV5 83 aa13.03□□□□□ -0.32
UBE3C-201ENST00000348165 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
UBE3C-201ENST00000348165 LINC00315P59091 139 aa13.01□□□□□ -0.33
UBE3C-201ENST00000348165 C4orf26Q17RF5 130 aa13.01□□□□□ -0.33
UBE3C-201ENST00000348165 SMCPP49901 116 aaPredicted RBP13□□□□□ -0.33
UBE3C-201ENST00000348165 LINC00846Q9NV44 126 aa12.99□□□□□ -0.33
UBE3C-201ENST00000348165 TMEM254Q8TBM7 123 aa12.99□□□□□ -0.33
UBE3C-201ENST00000348165 Q9UF83 564 aa12.98□□□□□ -0.33
UBE3C-201ENST00000348165 PRO0461Q9UI25 63 aa12.98□□□□□ -0.33
UBE3C-201ENST00000348165 FAM19A4Q96LR4 140 aa12.98□□□□□ -0.33
UBE3C-201ENST00000348165 KRTAP24-1Q3LI83 254 aa12.97□□□□□ -0.33
UBE3C-201ENST00000348165 ATRQ13535 2644 aa12.97□□□□□ -0.33
UBE3C-201ENST00000348165 ESRGQ1W209 222 aa12.97□□□□□ -0.33
UBE3C-201ENST00000348165 LINC00337Q8N6G1 96 aa12.97□□□□□ -0.33
UBE3C-201ENST00000348165 PTPRBP23467 1997 aa12.97□□□□□ -0.33
UBE3C-201ENST00000348165 IGHV3OR16-9A0A0B4J2B5 98 aa12.96□□□□□ -0.33
UBE3C-201ENST00000348165 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms