RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 SEC11AP67812 179 aa11.84□□□□□ -0.51
KCNQ2-201ENST00000344425 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
KCNQ2-201ENST00000344425 FAM19A3Q7Z5A8 133 aa11.84□□□□□ -0.51
KCNQ2-201ENST00000344425 CRYGAP11844 174 aa11.83□□□□□ -0.52
KCNQ2-201ENST00000344425 MRPL55Q7Z7F7 128 aaKnown RBP11.83□□□□□ -0.52
KCNQ2-201ENST00000344425 F8VRH5 84 aa11.82□□□□□ -0.52
KCNQ2-201ENST00000344425 BCE1O60756 84 aa11.82□□□□□ -0.52
KCNQ2-201ENST00000344425 HERVK_113P63121 156 aa11.82□□□□□ -0.52
KCNQ2-201ENST00000344425 TYMSOSQ8TAI1 123 aa11.82□□□□□ -0.52
KCNQ2-201ENST00000344425 A0A087X002 238 aa11.81□□□□□ -0.52
KCNQ2-201ENST00000344425 K7EMI3 77 aa11.81□□□□□ -0.52
KCNQ2-201ENST00000344425 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
KCNQ2-201ENST00000344425 IGIPA6NJ69 53 aa11.8□□□□□ -0.52
KCNQ2-201ENST00000344425 CXCL5P42830 114 aa11.79□□□□□ -0.52
KCNQ2-201ENST00000344425 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
KCNQ2-201ENST00000344425 CDKN2A-AS1Q9UH64 79 aa11.79□□□□□ -0.52
KCNQ2-201ENST00000344425 G0S2P27469 103 aa11.78□□□□□ -0.52
KCNQ2-201ENST00000344425 IFITM2Q01629 132 aa11.77□□□□□ -0.52
KCNQ2-201ENST00000344425 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
KCNQ2-201ENST00000344425 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
KCNQ2-201ENST00000344425 KRTAP9-2Q9BYQ4 174 aa11.76□□□□□ -0.53
KCNQ2-201ENST00000344425 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
KCNQ2-201ENST00000344425 RAB14P61106 215 aa11.75□□□□□ -0.53
KCNQ2-201ENST00000344425 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
KCNQ2-201ENST00000344425 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
KCNQ2-201ENST00000344425 MT-ND4LP03901 98 aa11.72□□□□□ -0.53
KCNQ2-201ENST00000344425 UBE2AP49459 152 aa11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 CLLU1Q5K131 121 aa11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 TOMM6Q96B49 74 aa11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
KCNQ2-201ENST00000344425 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
KCNQ2-201ENST00000344425 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
KCNQ2-201ENST00000344425 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
KCNQ2-201ENST00000344425 NKAPP1Q8N9T2 125 aa11.69□□□□□ -0.54
KCNQ2-201ENST00000344425 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
KCNQ2-201ENST00000344425 FAM229BQ4G0N7 80 aa11.69□□□□□ -0.54
KCNQ2-201ENST00000344425 KRTAP13-2Q52LG2 175 aa11.69□□□□□ -0.54
KCNQ2-201ENST00000344425 ERASQ7Z444 233 aa11.69□□□□□ -0.54
KCNQ2-201ENST00000344425 TINCRA0A1B0GVN0 87 aa11.68□□□□□ -0.54
KCNQ2-201ENST00000344425 LCE2AQ5TA79 106 aaPredicted RBP11.68□□□□□ -0.54
KCNQ2-201ENST00000344425 LINC00304Q8N9R0 145 aa11.68□□□□□ -0.54
KCNQ2-201ENST00000344425 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
KCNQ2-201ENST00000344425 FAT4Q6V0I7 4981 aa11.68□□□□□ -0.54
KCNQ2-201ENST00000344425 RAB5BP61020 215 aa11.67□□□□□ -0.54
KCNQ2-201ENST00000344425 KRTAP13-1Q8IUC0 172 aa11.67□□□□□ -0.54
KCNQ2-201ENST00000344425 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
KCNQ2-201ENST00000344425 IGLV5-45A0A087WSX0 123 aa11.65□□□□□ -0.54
KCNQ2-201ENST00000344425 CDIP1Q9H305 208 aa11.65□□□□□ -0.54
KCNQ2-201ENST00000344425 IGKV2D-26A0A0A0MRZ7 120 aa11.64□□□□□ -0.55
KCNQ2-201ENST00000344425 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
KCNQ2-201ENST00000344425 CTAG1AP78358 180 aa11.63□□□□□ -0.55
KCNQ2-201ENST00000344425 TPRXLQ17RH7 258 aa11.62□□□□□ -0.55
KCNQ2-201ENST00000344425 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
KCNQ2-201ENST00000344425 ATP5LO75964 103 aa11.61□□□□□ -0.55
KCNQ2-201ENST00000344425 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
KCNQ2-201ENST00000344425 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
KCNQ2-201ENST00000344425 IGLV7-46A0A075B6I9 117 aa11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 CST9LQ9H4G1 147 aa11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 MUC17Q685J3 4493 aa11.6□□□□□ -0.55
KCNQ2-201ENST00000344425 H3BRM9 83 aa11.59□□□□□ -0.55
KCNQ2-201ENST00000344425 FAM19A1Q7Z5A9 133 aa11.58□□□□□ -0.56
KCNQ2-201ENST00000344425 SCO1O75880 301 aa11.57□□□□□ -0.56
KCNQ2-201ENST00000344425 PFN2P35080 140 aa11.57□□□□□ -0.56
KCNQ2-201ENST00000344425 PRLHP81277 87 aa11.57□□□□□ -0.56
KCNQ2-201ENST00000344425 PMVKQ15126 192 aa11.57□□□□□ -0.56
KCNQ2-201ENST00000344425 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
KCNQ2-201ENST00000344425 TMEM126AQ9H061 195 aa11.56□□□□□ -0.56
KCNQ2-201ENST00000344425 COMMD7Q86VX2 200 aa11.55□□□□□ -0.56
KCNQ2-201ENST00000344425 LINC01546A6NGU7 62 aa11.54□□□□□ -0.56
KCNQ2-201ENST00000344425 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
KCNQ2-201ENST00000344425 VPREB1P12018 145 aa11.53□□□□□ -0.56
KCNQ2-201ENST00000344425 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.56
KCNQ2-201ENST00000344425 TMEM218A2RU14 115 aa11.52□□□□□ -0.56
KCNQ2-201ENST00000344425 TMEM238C9JI98 176 aa11.52□□□□□ -0.56
KCNQ2-201ENST00000344425 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.57
KCNQ2-201ENST00000344425 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
KCNQ2-201ENST00000344425 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.57
KCNQ2-201ENST00000344425 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
KCNQ2-201ENST00000344425 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
KCNQ2-201ENST00000344425 COX17Q14061 63 aa11.51□□□□□ -0.57
KCNQ2-201ENST00000344425 SPAG11AQ6PDA7 123 aa11.51□□□□□ -0.57
KCNQ2-201ENST00000344425 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
KCNQ2-201ENST00000344425 IGLV5-39A0A0G2JS06 123 aa11.5□□□□□ -0.57
KCNQ2-201ENST00000344425 KRTAP9-6A0A140TA67 174 aa11.5□□□□□ -0.57
KCNQ2-201ENST00000344425 M0R378 163 aa11.5□□□□□ -0.57
KCNQ2-201ENST00000344425 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
KCNQ2-201ENST00000344425 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
KCNQ2-201ENST00000344425 IGLC3P0DOY3 106 aa11.49□□□□□ -0.57
KCNQ2-201ENST00000344425 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
KCNQ2-201ENST00000344425 HIGD2AQ9BW72 106 aa11.47□□□□□ -0.57
KCNQ2-201ENST00000344425 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
KCNQ2-201ENST00000344425 S100PP25815 95 aa11.45□□□□□ -0.58
KCNQ2-201ENST00000344425 NDUFA6P56556 154 aa11.45□□□□□ -0.58
KCNQ2-201ENST00000344425 ZNF22P17026 224 aaPredicted RBP11.44□□□□□ -0.58
KCNQ2-201ENST00000344425 COX19Q49B96 90 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms