RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 TRBV30A0A0K0K1B3 111 aa8.85□□□□□ -0.99
TRIOBP-202ENST00000344404 J3QL48 77 aa8.85□□□□□ -0.99
TRIOBP-202ENST00000344404 COX17Q14061 63 aa8.84□□□□□ -0.99
TRIOBP-202ENST00000344404 BRWD1-AS2P59051 145 aa8.84□□□□□ -1
TRIOBP-202ENST00000344404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
TRIOBP-202ENST00000344404 A0A087WSZ3 146 aa8.83□□□□□ -1
TRIOBP-202ENST00000344404 TTC28Q96AY4 2481 aa8.83□□□□□ -1
TRIOBP-202ENST00000344404 CCDC179H3BU77 68 aa8.82□□□□□ -1
TRIOBP-202ENST00000344404 ACACBO00763 2458 aa8.82□□□□□ -1
TRIOBP-202ENST00000344404 IGLV8-61A0A075B6I0 122 aa8.82□□□□□ -1
TRIOBP-202ENST00000344404 A8MTW9 85 aa8.82□□□□□ -1
TRIOBP-202ENST00000344404 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
TRIOBP-202ENST00000344404 MDFIQ99750 246 aa8.81□□□□□ -1
TRIOBP-202ENST00000344404 LIMD2Q9BT23 127 aa8.81□□□□□ -1
TRIOBP-202ENST00000344404 COL27A1Q8IZC6 1860 aaPredicted RBP8.8□□□□□ -1
TRIOBP-202ENST00000344404 LINC00575Q6W349 94 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 C16orf90A8MZG2 172 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 LINC00694P0DN24 101 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 Q6ZPA2 131 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 C11orf21Q9P2W6 132 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 Q8IZM0 81 aa8.8□□□□□ -1
TRIOBP-202ENST00000344404 A0A087WYN8 130 aa8.79□□□□□ -1
TRIOBP-202ENST00000344404 hDV103S1A0JD37 113 aa8.79□□□□□ -1
TRIOBP-202ENST00000344404 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
TRIOBP-202ENST00000344404 CHTF8P0CG12 524 aa8.78□□□□□ -1
TRIOBP-202ENST00000344404 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
TRIOBP-202ENST00000344404 FAM229AH3BQW9 127 aa8.78□□□□□ -1
TRIOBP-202ENST00000344404 TRBV7-7A0A0K0K1E9 115 aa8.77□□□□□ -1.01
TRIOBP-202ENST00000344404 NRACQ8N912 160 aa8.77□□□□□ -1.01
TRIOBP-202ENST00000344404 Q8N814 137 aa8.77□□□□□ -1.01
TRIOBP-202ENST00000344404 A0A087WVE0 104 aa8.77□□□□□ -1.01
TRIOBP-202ENST00000344404 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
TRIOBP-202ENST00000344404 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
TRIOBP-202ENST00000344404 ZFYVE26Q68DK2 2539 aa8.76□□□□□ -1.01
TRIOBP-202ENST00000344404 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
TRIOBP-202ENST00000344404 IGLV1-40P01703 118 aa8.75□□□□□ -1.01
TRIOBP-202ENST00000344404 MYO18BQ8IUG5 2567 aa8.75□□□□□ -1.01
TRIOBP-202ENST00000344404 MOBPQ13875 183 aa8.75□□□□□ -1.01
TRIOBP-202ENST00000344404 COX6B2Q6YFQ2 88 aa8.75□□□□□ -1.01
TRIOBP-202ENST00000344404 COX7CP15954 63 aa8.74□□□□□ -1.01
TRIOBP-202ENST00000344404 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
TRIOBP-202ENST00000344404 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
TRIOBP-202ENST00000344404 LINC00242Q5T6M2 205 aa8.74□□□□□ -1.01
TRIOBP-202ENST00000344404 CACNA1AO00555 2505 aa8.73□□□□□ -1.01
TRIOBP-202ENST00000344404 FHL3Q13643 280 aa8.73□□□□□ -1.01
TRIOBP-202ENST00000344404 FSTL3O95633 263 aa8.73□□□□□ -1.01
TRIOBP-202ENST00000344404 DNAH12Q6ZR08 3092 aa8.73□□□□□ -1.01
TRIOBP-202ENST00000344404 FHL2Q14192 279 aa8.73□□□□□ -1.01
TRIOBP-202ENST00000344404 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 A0A1B0GU69 56 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 LINC00574Q9H8X3 128 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 KLLNB2CW77 178 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 P0C879 139 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
TRIOBP-202ENST00000344404 ACYP2P14621 99 aa8.71□□□□□ -1.01
TRIOBP-202ENST00000344404 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.01
TRIOBP-202ENST00000344404 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.02
TRIOBP-202ENST00000344404 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
TRIOBP-202ENST00000344404 Q6JHZ5 121 aa8.71□□□□□ -1.02
TRIOBP-202ENST00000344404 C11orf1Q9H5F2 150 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 ZNF580Q9UK33 172 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 PCNTO95613 3336 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 Q6ZSN1 163 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 Q6ZRU5 148 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 C1orf64Q8NEQ6 169 aa8.7□□□□□ -1.02
TRIOBP-202ENST00000344404 IGLV1-51P01701 117 aa8.69□□□□□ -1.02
TRIOBP-202ENST00000344404 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
TRIOBP-202ENST00000344404 Q8N6K4 173 aa8.69□□□□□ -1.02
TRIOBP-202ENST00000344404 Q8N3U1 123 aa8.68□□□□□ -1.02
TRIOBP-202ENST00000344404 EIF4EBP1Q13541 118 aaPredicted RBP8.68□□□□□ -1.02
TRIOBP-202ENST00000344404 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
TRIOBP-202ENST00000344404 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
TRIOBP-202ENST00000344404 KRTAP24-1Q3LI83 254 aa8.67□□□□□ -1.02
TRIOBP-202ENST00000344404 IGF2RP11717 2491 aa8.67□□□□□ -1.02
TRIOBP-202ENST00000344404 C5orf42Q9H799 3197 aa8.65□□□□□ -1.02
TRIOBP-202ENST00000344404 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.02
TRIOBP-202ENST00000344404 Q96NJ1 140 aa8.65□□□□□ -1.02
TRIOBP-202ENST00000344404 CHCHD7Q9BUK0 85 aa8.65□□□□□ -1.03
TRIOBP-202ENST00000344404 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
TRIOBP-202ENST00000344404 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
TRIOBP-202ENST00000344404 C16orf95Q9H693 158 aa8.64□□□□□ -1.03
TRIOBP-202ENST00000344404 CRIP3Q6Q6R5 217 aa8.63□□□□□ -1.03
TRIOBP-202ENST00000344404 IMUPQ9GZP8 106 aa8.63□□□□□ -1.03
TRIOBP-202ENST00000344404 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 SMIM29Q86T20 159 aa8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 FN1P02751 2386 aaKnown RBP8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
TRIOBP-202ENST00000344404 APLNQ9ULZ1 77 aa8.61□□□□□ -1.03
TRIOBP-202ENST00000344404 LINC00313P59037 77 aa8.61□□□□□ -1.03
TRIOBP-202ENST00000344404 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 MYO9AB2RTY4 2548 aa8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 TSPEAR-AS2P59090 65 aa8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 C2orf91Q6ZV80 131 aa8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
TRIOBP-202ENST00000344404 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms