RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 TMEM223A0PJW6 202 aa14.22□□□□□ -0.13
RBM38-201ENST00000342690 NDUFA1O15239 70 aa14.22□□□□□ -0.13
RBM38-201ENST00000342690 IGLV5-39A0A0G2JS06 123 aa14.21□□□□□ -0.13
RBM38-201ENST00000342690 CKS1BP61024 79 aa14.21□□□□□ -0.13
RBM38-201ENST00000342690 HERVK_113P61574 105 aa14.21□□□□□ -0.13
RBM38-201ENST00000342690 C9orf163Q8N9P6 203 aa14.21□□□□□ -0.13
RBM38-201ENST00000342690 CXCL5P42830 114 aa14.2□□□□□ -0.14
RBM38-201ENST00000342690 AKR1D1P51857 326 aa14.2□□□□□ -0.14
RBM38-201ENST00000342690 Q6ZRU5 148 aa14.2□□□□□ -0.14
RBM38-201ENST00000342690 C2orf82Q6UX34 121 aa14.17□□□□□ -0.14
RBM38-201ENST00000342690 PKIGQ9Y2B9 76 aa14.17□□□□□ -0.14
RBM38-201ENST00000342690 UNQ6190/PRO20217Q6UXQ8 127 aa14.16□□□□□ -0.14
RBM38-201ENST00000342690 RNF151Q2KHN1 245 aa14.15□□□□□ -0.14
RBM38-201ENST00000342690 KIAA1109Q2LD37 5005 aa14.14□□□□□ -0.15
RBM38-201ENST00000342690 TRBV30A0A0K0K1B3 111 aa14.14□□□□□ -0.15
RBM38-201ENST00000342690 CDK2AP2O75956 126 aa14.14□□□□□ -0.15
RBM38-201ENST00000342690 C10orf25Q5T742 122 aa14.14□□□□□ -0.15
RBM38-201ENST00000342690 FAM30AQ9NZY2 134 aa14.14□□□□□ -0.15
RBM38-201ENST00000342690 LEPROTO15243 131 aa14.13□□□□□ -0.15
RBM38-201ENST00000342690 PLEKHB2Q96CS7 222 aa14.13□□□□□ -0.15
RBM38-201ENST00000342690 SFTA2Q6UW10 78 aa14.12□□□□□ -0.15
RBM38-201ENST00000342690 C6orf48Q9UBA6 75 aa14.12□□□□□ -0.15
RBM38-201ENST00000342690 Q6ZSA8 131 aa14.11□□□□□ -0.15
RBM38-201ENST00000342690 APOBP04114 4563 aaKnown RBP14.11□□□□□ -0.15
RBM38-201ENST00000342690 LOC107984640A0A0U1RRK4 108 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 SCGB1D1O95968 90 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 XGP55808 180 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 SDIM1Q6ZPB5 146 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 ATOH7Q8N100 152 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 RYR1P21817 5038 aa14.1□□□□□ -0.15
RBM38-201ENST00000342690 E9PLD3 99 aa14.09□□□□□ -0.15
RBM38-201ENST00000342690 HAMPP81172 84 aa14.08□□□□□ -0.16
RBM38-201ENST00000342690 STPG4Q8N801 248 aa14.08□□□□□ -0.16
RBM38-201ENST00000342690 J3QQQ9 107 aa14.07□□□□□ -0.16
RBM38-201ENST00000342690 LGALS3P17931 250 aaKnown RBP14.07□□□□□ -0.16
RBM38-201ENST00000342690 RPL18AQ02543 176 aaKnown RBP14.07□□□□□ -0.16
RBM38-201ENST00000342690 C9orf116Q5BN46 136 aaPredicted RBP14.06□□□□□ -0.16
RBM38-201ENST00000342690 ZNF625Q96I27 306 aaPredicted RBP14.06□□□□□ -0.16
RBM38-201ENST00000342690 NDUFA12Q9UI09 145 aa14.06□□□□□ -0.16
RBM38-201ENST00000342690 DNAH8Q96JB1 4490 aa14.06□□□□□ -0.16
RBM38-201ENST00000342690 TLX1NBP0CAT3 122 aa14.05□□□□□ -0.16
RBM38-201ENST00000342690 MYMXA0A1B0GTQ4 84 aa14.04□□□□□ -0.16
RBM38-201ENST00000342690 NMUP48645 174 aa14.04□□□□□ -0.16
RBM38-201ENST00000342690 TSPEAR-AS2P59090 65 aa14.04□□□□□ -0.16
RBM38-201ENST00000342690 HSBP1L1C9JCN9 74 aa14.03□□□□□ -0.16
RBM38-201ENST00000342690 PANO1I0J062 215 aa14.03□□□□□ -0.16
RBM38-201ENST00000342690 HERV-K104P63124 156 aa14.03□□□□□ -0.16
RBM38-201ENST00000342690 GAGE2BQ13066 116 aa14.03□□□□□ -0.16
RBM38-201ENST00000342690 LINC00474Q9P2X8 69 aa14.03□□□□□ -0.16
RBM38-201ENST00000342690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.03□□□□□ -0.16
RBM38-201ENST00000342690 A0A096LNI7 61 aa14.02□□□□□ -0.17
RBM38-201ENST00000342690 IGKV2-24A0A0C4DH68 120 aa14.02□□□□□ -0.17
RBM38-201ENST00000342690 NDUFC2-KCTD14E9PQ53 114 aa14.02□□□□□ -0.17
RBM38-201ENST00000342690 HERC2O95714 4834 aa14.02□□□□□ -0.17
RBM38-201ENST00000342690 CHTF8P0CG12 524 aa14.01□□□□□ -0.17
RBM38-201ENST00000342690 PTTG1IPP53801 180 aa14.01□□□□□ -0.17
RBM38-201ENST00000342690 HSPG2P98160 4391 aa14□□□□□ -0.17
RBM38-201ENST00000342690 SCXQ7RTU7 201 aa14□□□□□ -0.17
RBM38-201ENST00000342690 DPH3Q96FX2 82 aa14□□□□□ -0.17
RBM38-201ENST00000342690 ERG28Q9UKR5 140 aa14□□□□□ -0.17
RBM38-201ENST00000342690 CIRBPQ14011 172 aaKnown RBP13.99□□□□□ -0.17
RBM38-201ENST00000342690 JOSD1Q15040 202 aaPredicted RBP13.99□□□□□ -0.17
RBM38-201ENST00000342690 ANKRD39Q53RE8 183 aa13.99□□□□□ -0.17
RBM38-201ENST00000342690 Q6ZRP5 223 aa13.99□□□□□ -0.17
RBM38-201ENST00000342690 IGKV2D-26A0A0A0MRZ7 120 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 PFN2P35080 140 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 COX17Q14061 63 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 MAJINQ3KP22 176 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 GAGE2EQ4V326 116 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 MEIG1Q5JSS6 88 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 SPACA4Q8TDM5 124 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 KRTAP17-1Q9BYP8 105 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 GAGE2DQ9UEU5 116 aa13.98□□□□□ -0.17
RBM38-201ENST00000342690 LINC00587B1AMM8 73 aa13.97□□□□□ -0.17
RBM38-201ENST00000342690 CIRBP-AS1Q8TBR5 109 aa13.97□□□□□ -0.17
RBM38-201ENST00000342690 ZNF815PA8K554 130 aa13.94□□□□□ -0.18
RBM38-201ENST00000342690 LINC00158P58513 81 aa13.94□□□□□ -0.18
RBM38-201ENST00000342690 SMR3BP02814 79 aaPredicted RBP13.93□□□□□ -0.18
RBM38-201ENST00000342690 SMIM13P0DJ93 91 aa13.92□□□□□ -0.18
RBM38-201ENST00000342690 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
RBM38-201ENST00000342690 A0A087WYN8 130 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 PYY3Q5JQD4 70 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 Q8N1X5 172 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 VAMP8Q9BV40 100 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 TTTY13Q9BZ97 58 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 XAGE1AQ9HD64 81 aa13.9□□□□□ -0.18
RBM38-201ENST00000342690 A0A0J9YXY3 114 aa13.89□□□□□ -0.19
RBM38-201ENST00000342690 C9orf129Q5T035 196 aaKnown RBP13.88□□□□□ -0.19
RBM38-201ENST00000342690 PLAC8Q9NZF1 115 aa13.88□□□□□ -0.19
RBM38-201ENST00000342690 SCGB1D4Q6XE38 83 aa13.87□□□□□ -0.19
RBM38-201ENST00000342690 PCP2Q8IVA1 136 aa13.87□□□□□ -0.19
RBM38-201ENST00000342690 SND1-IT1Q9HBX3 110 aa13.87□□□□□ -0.19
RBM38-201ENST00000342690 MIR7-3HGQ8N6C7 128 aa13.86□□□□□ -0.19
RBM38-201ENST00000342690 PAM16Q9Y3D7 125 aa13.86□□□□□ -0.19
RBM38-201ENST00000342690 SPATA45Q537H7 98 aa13.85□□□□□ -0.19
RBM38-201ENST00000342690 A0A1W2PNN7 141 aa13.84□□□□□ -0.19
RBM38-201ENST00000342690 TIMM17BO60830 172 aa13.84□□□□□ -0.19
RBM38-201ENST00000342690 FAM19A5Q7Z5A7 132 aaPredicted RBP13.84□□□□□ -0.19
RBM38-201ENST00000342690 LINC00528Q8N1L1 170 aa13.84□□□□□ -0.19
RBM38-201ENST00000342690 FAM168BA1KXE4 195 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms