RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 IBA57-AS1B1ANH7 110 aa2.63□□□□□ -1.99
SYNE1-201ENST00000341594 IGSF10Q6WRI0 2623 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 MIAQ16674 131 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 NDUFA1O15239 70 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 MAST4O15021 2626 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 hDV103S1A0JD37 113 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 ATP11AUNQ6ZP68 121 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 IGIPA6NJ69 53 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 DMBT1Q9UGM3 2413 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-201ENST00000341594 UBE2D4Q9Y2X8 147 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 SPINK1P00995 79 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 BRWD1-AS2P59051 145 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 ADORA2A-AS1P86434 159 aa2.62□□□□□ -1.99
SYNE1-201ENST00000341594 DAZAP2Q15038 168 aaPredicted RBP2.62□□□□□ -1.99
SYNE1-201ENST00000341594 GPHB5Q86YW7 130 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 IGLV1-47P01700 117 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 PRR15Q8IV56 129 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 TRGV2A0A075B6R0 118 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 NOP10Q9NPE3 64 aaKnown RBP2.61□□□□□ -1.99
SYNE1-201ENST00000341594 HCG22E2RYF7 251 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 SND1-IT1Q9HBX3 110 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 IGKV4-1P06312 121 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 AMELXQ99217 191 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 Q8N6K4 173 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 WT1-ASQ06250 92 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 C6orf223Q8N319 242 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 Q6ZRU5 148 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 C20orf203Q8NBC4 194 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 I3L2K1 104 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 IGFL2Q6UWQ7 119 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 ZNF843Q8N446 348 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 FBXL19-AS1Q494R0 122 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 XAGE1AQ9HD64 81 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 C2orf48Q96LS8 159 aa2.61□□□□□ -1.99
SYNE1-201ENST00000341594 IGLV11-55A0A075B6I3 123 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 C11orf21Q9P2W6 132 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 LOC110117498A0A087WWA1 95 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 NDUFA4O00483 81 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 IGHV7-4-1A0A0J9YVY3 117 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 RNF223E7ERA6 249 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 RNASE3P12724 160 aaKnown RBP2.6□□□□□ -1.99
SYNE1-201ENST00000341594 Q6ZPA2 131 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 SMAD5-AS1Q9Y6J3 95 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 C11orf71Q6IPW1 123 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 PHF5AQ7RTV0 110 aaKnown RBP2.6□□□□□ -1.99
SYNE1-201ENST00000341594 CAMK2N2Q96S95 79 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 HIVEP1P15822 2718 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 CCKP06307 115 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 EPM2AB3EWF7 344 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 ZFP36P26651 326 aaKnown RBP2.6□□□□□ -1.99
SYNE1-201ENST00000341594 TENM2Q9NT68 2774 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 TRGV4A0A0C4DH28 118 aa2.6□□□□□ -1.99
SYNE1-201ENST00000341594 AVPP01185 164 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 PLA2G1BP04054 148 aaKnown RBP2.59□□□□□ -1.99
SYNE1-201ENST00000341594 C17orf58Q2M2W7 97 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 Q8N3U1 123 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 OVOL3O00110 214 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 IGHV1-46P01743 117 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 C9orf66Q5T8R8 295 aa2.59□□□□□ -1.99
SYNE1-201ENST00000341594 CELSR2Q9HCU4 2923 aa2.59□□□□□ -2
SYNE1-201ENST00000341594 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -2
SYNE1-201ENST00000341594 ATP6V0E1O15342 81 aa2.59□□□□□ -2
SYNE1-201ENST00000341594 RNF185Q96GF1 192 aa2.59□□□□□ -2
SYNE1-201ENST00000341594 URB1-AS1Q96HZ7 61 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 Q1T7F1 81 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 H3BUX3 64 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 RHPN1-AS1Q9BWJ2 59 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 E7EQL1 145 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 SLURP1P55000 103 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 RPL37AP61513 92 aaKnown RBP2.58□□□□□ -2
SYNE1-201ENST00000341594 SMCPP49901 116 aaPredicted RBP2.58□□□□□ -2
SYNE1-201ENST00000341594 KLLNB2CW77 178 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 WFDC10BQ8IUB3 73 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 RBM12B-AS1Q9P1G2 102 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 Q6ZQY7 126 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 B4DSR2 109 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 A0A1B0GUV1 79 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 DSCR9P59020 149 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 LY6LH3BQJ8 138 aa2.58□□□□□ -2
SYNE1-201ENST00000341594 IGLV5-39A0A0G2JS06 123 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 Q6ZTI0 123 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 FAM19A4Q96LR4 140 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 LINC00208Q96KT6 92 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 A6NDX4 124 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 Q8N9W7 124 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 RNASE6Q93091 150 aaKnown RBP2.57□□□□□ -2
SYNE1-201ENST00000341594 CAMK2N1Q7Z7J9 78 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 M0QY20 66 aa2.57□□□□□ -2
SYNE1-201ENST00000341594 REG3AQ06141 175 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 A0A096LNJ9 63 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 ZANQ9Y493 2812 aa2.56□□□□□ -2
SYNE1-201ENST00000341594 WFDC13Q8IUB5 93 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms