RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 IGKV2D-24A0A075B6R9 120 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 HBDP02042 147 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
TPM3-207ENST00000341372 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 OCR1Q9BZK8 76 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 A6NDN8 102 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 UBE2L6O14933 153 aa6.74□□□□□ -1.33
TPM3-207ENST00000341372 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
TPM3-207ENST00000341372 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
TPM3-207ENST00000341372 REG3AQ06141 175 aa6.73□□□□□ -1.33
TPM3-207ENST00000341372 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
TPM3-207ENST00000341372 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
TPM3-207ENST00000341372 LINC01545Q5VT33 79 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 DNAH8Q96JB1 4490 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
TPM3-207ENST00000341372 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
TPM3-207ENST00000341372 ZNF25P17030 456 aaPredicted RBP6.72□□□□□ -1.33
TPM3-207ENST00000341372 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
TPM3-207ENST00000341372 CLPSL2Q6UWE3 100 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 PMCHL2Q9BQD1 86 aa6.72□□□□□ -1.33
TPM3-207ENST00000341372 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.33
TPM3-207ENST00000341372 FGF6P10767 208 aa6.71□□□□□ -1.33
TPM3-207ENST00000341372 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
TPM3-207ENST00000341372 LECT2O14960 151 aa6.7□□□□□ -1.34
TPM3-207ENST00000341372 KRTAP10-1P60331 282 aa6.7□□□□□ -1.34
TPM3-207ENST00000341372 C4orf26Q17RF5 130 aa6.7□□□□□ -1.34
TPM3-207ENST00000341372 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
TPM3-207ENST00000341372 AMMECR1LQ6DCA0 310 aa6.7□□□□□ -1.34
TPM3-207ENST00000341372 TOMM6Q96B49 74 aa6.69□□□□□ -1.34
TPM3-207ENST00000341372 K7EMI3 77 aa6.69□□□□□ -1.34
TPM3-207ENST00000341372 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
TPM3-207ENST00000341372 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
TPM3-207ENST00000341372 ORMDL2Q53FV1 153 aa6.68□□□□□ -1.34
TPM3-207ENST00000341372 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
TPM3-207ENST00000341372 HIST1H4GQ99525 98 aa6.68□□□□□ -1.34
TPM3-207ENST00000341372 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 C2orf66Q6UXQ4 117 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 CDC42SE2Q9NRR3 84 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 DDTP30046 118 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 PFN2P35080 140 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
TPM3-207ENST00000341372 FAM104AQ969W3 186 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 UBE2D4Q9Y2X8 147 aa6.67□□□□□ -1.34
TPM3-207ENST00000341372 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
TPM3-207ENST00000341372 SMAGPQ0VAQ4 97 aa6.66□□□□□ -1.34
TPM3-207ENST00000341372 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
TPM3-207ENST00000341372 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
TPM3-207ENST00000341372 Q8N1X5 172 aa6.66□□□□□ -1.34
TPM3-207ENST00000341372 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
TPM3-207ENST00000341372 ZC2HC1BQ5TFG8 222 aa6.65□□□□□ -1.35
TPM3-207ENST00000341372 Q6ZSA8 131 aa6.65□□□□□ -1.35
TPM3-207ENST00000341372 SMIM29Q86T20 159 aa6.65□□□□□ -1.35
TPM3-207ENST00000341372 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.35
TPM3-207ENST00000341372 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.35
TPM3-207ENST00000341372 LINC00959A0A1B0GUT2 108 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 C14orf144Q96I85 54 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
TPM3-207ENST00000341372 IGKV3OR2-268A0A0C4DH90 116 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 C20orf202A1L168 122 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 OPRPNQ99935 248 aaPredicted RBP6.64□□□□□ -1.35
TPM3-207ENST00000341372 MIEN1Q9BRT3 115 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
TPM3-207ENST00000341372 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
TPM3-207ENST00000341372 Q6ZUT4 128 aa6.63□□□□□ -1.35
TPM3-207ENST00000341372 C15orf56Q8N910 161 aa6.63□□□□□ -1.35
TPM3-207ENST00000341372 MRPL35Q9NZE8 188 aaKnown RBP6.63□□□□□ -1.35
TPM3-207ENST00000341372 CYSLTR1Q9Y271 337 aa6.63□□□□□ -1.35
TPM3-207ENST00000341372 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
TPM3-207ENST00000341372 CCL25O15444 150 aa6.62□□□□□ -1.35
TPM3-207ENST00000341372 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
TPM3-207ENST00000341372 MRPS36P82909 103 aaKnown RBP6.62□□□□□ -1.35
TPM3-207ENST00000341372 FAT1Q14517 4588 aa6.62□□□□□ -1.35
TPM3-207ENST00000341372 SS18Q15532 418 aa6.61□□□□□ -1.35
TPM3-207ENST00000341372 TIMM17AQ99595 171 aa6.61□□□□□ -1.35
TPM3-207ENST00000341372 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 GVQW2A0A096LPI5 108 aaPredicted RBP6.6□□□□□ -1.35
TPM3-207ENST00000341372 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
TPM3-207ENST00000341372 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 A0A087X002 238 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 F8VRH5 84 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 IGKCP01834 107 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 XCL1P47992 114 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 CST9LQ9H4G1 147 aa6.6□□□□□ -1.35
TPM3-207ENST00000341372 SLPIP03973 132 aa6.59□□□□□ -1.35
TPM3-207ENST00000341372 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
TPM3-207ENST00000341372 TMEM141Q96I45 108 aa6.59□□□□□ -1.35
TPM3-207ENST00000341372 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
TPM3-207ENST00000341372 DHRS4-AS1Q9P1J3 65 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms