RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 LINC00474Q9P2X8 69 aa13.58□□□□□ -0.23
SH2B3-201ENST00000341259 NUPR2A6NF83 97 aa13.58□□□□□ -0.24
SH2B3-201ENST00000341259 BRK1Q8WUW1 75 aa13.58□□□□□ -0.24
SH2B3-201ENST00000341259 ZNF706Q9Y5V0 76 aaPredicted RBP13.58□□□□□ -0.24
SH2B3-201ENST00000341259 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
SH2B3-201ENST00000341259 LINC01561Q8N1V8 128 aa13.57□□□□□ -0.24
SH2B3-201ENST00000341259 M0QXV9 152 aa13.57□□□□□ -0.24
SH2B3-201ENST00000341259 CELA1Q9UNI1 258 aa13.57□□□□□ -0.24
SH2B3-201ENST00000341259 NTM-AS1Q6ZSK4 140 aa13.56□□□□□ -0.24
SH2B3-201ENST00000341259 KLK9Q2XQG4 91 aa13.56□□□□□ -0.24
SH2B3-201ENST00000341259 Q6JHZ5 121 aa13.55□□□□□ -0.24
SH2B3-201ENST00000341259 SERP2Q8N6R1 65 aa13.54□□□□□ -0.24
SH2B3-201ENST00000341259 FAM240AA0A1B0GVK7 77 aa13.54□□□□□ -0.24
SH2B3-201ENST00000341259 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
SH2B3-201ENST00000341259 Q6Q795 121 aa13.53□□□□□ -0.24
SH2B3-201ENST00000341259 CCDC179H3BU77 68 aa13.52□□□□□ -0.24
SH2B3-201ENST00000341259 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
SH2B3-201ENST00000341259 USP9XQ93008 2570 aaPredicted RBP13.52□□□□□ -0.25
SH2B3-201ENST00000341259 HRCT1Q6UXD1 115 aa13.52□□□□□ -0.25
SH2B3-201ENST00000341259 C2orf48Q96LS8 159 aa13.51□□□□□ -0.25
SH2B3-201ENST00000341259 F8WDY8 70 aa13.51□□□□□ -0.25
SH2B3-201ENST00000341259 FSHBP01225 129 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 REG3GQ6UW15 175 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 AGRNO00468 2067 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 COX7CP15954 63 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 ABCA12Q86UK0 2595 aa13.5□□□□□ -0.25
SH2B3-201ENST00000341259 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
SH2B3-201ENST00000341259 WFDC13Q8IUB5 93 aa13.48□□□□□ -0.25
SH2B3-201ENST00000341259 ATP5EP56381 51 aaPredicted RBP13.48□□□□□ -0.25
SH2B3-201ENST00000341259 SPTBN4Q9H254 2564 aa13.47□□□□□ -0.25
SH2B3-201ENST00000341259 NDUFC1O43677 76 aa13.46□□□□□ -0.25
SH2B3-201ENST00000341259 LINC00337Q8N6G1 96 aa13.46□□□□□ -0.25
SH2B3-201ENST00000341259 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.26
SH2B3-201ENST00000341259 Q6ZRU5 148 aa13.46□□□□□ -0.26
SH2B3-201ENST00000341259 ZNF462Q96JM2 2506 aa13.46□□□□□ -0.26
SH2B3-201ENST00000341259 SPINK6Q6UWN8 80 aa13.46□□□□□ -0.26
SH2B3-201ENST00000341259 Q9UF83 564 aa13.46□□□□□ -0.26
SH2B3-201ENST00000341259 IGHV3OR16-9A0A0B4J2B5 98 aa13.45□□□□□ -0.26
SH2B3-201ENST00000341259 SNURFQ9Y675 71 aa13.44□□□□□ -0.26
SH2B3-201ENST00000341259 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
SH2B3-201ENST00000341259 MPLKIPQ8TAP9 179 aa13.44□□□□□ -0.26
SH2B3-201ENST00000341259 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
SH2B3-201ENST00000341259 X6R8D5 127 aa13.43□□□□□ -0.26
SH2B3-201ENST00000341259 C1orf137Q5JT78 98 aa13.43□□□□□ -0.26
SH2B3-201ENST00000341259 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
SH2B3-201ENST00000341259 USP9YO00507 2555 aaPredicted RBP13.42□□□□□ -0.26
SH2B3-201ENST00000341259 IGLV5-45A0A087WSX0 123 aa13.41□□□□□ -0.26
SH2B3-201ENST00000341259 LINC00575Q6W349 94 aa13.41□□□□□ -0.26
SH2B3-201ENST00000341259 MRPL55Q7Z7F7 128 aaKnown RBP13.41□□□□□ -0.26
SH2B3-201ENST00000341259 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
SH2B3-201ENST00000341259 A8MTW9 85 aa13.4□□□□□ -0.26
SH2B3-201ENST00000341259 PRYO14603 147 aa13.39□□□□□ -0.27
SH2B3-201ENST00000341259 FAM30AQ9NZY2 134 aa13.38□□□□□ -0.27
SH2B3-201ENST00000341259 IGLV5-52A0A0A0MRZ9 124 aa13.37□□□□□ -0.27
SH2B3-201ENST00000341259 A0A087WVE0 104 aa13.37□□□□□ -0.27
SH2B3-201ENST00000341259 ESRGQ1W209 222 aa13.37□□□□□ -0.27
SH2B3-201ENST00000341259 LINC01556Q5JQF7 62 aa13.35□□□□□ -0.27
SH2B3-201ENST00000341259 CASC2Q6XLA1 102 aa13.35□□□□□ -0.27
SH2B3-201ENST00000341259 LRRK2Q5S007 2527 aa13.33□□□□□ -0.28
SH2B3-201ENST00000341259 V9GYY9 64 aa13.33□□□□□ -0.28
SH2B3-201ENST00000341259 KRTAP24-1Q3LI83 254 aa13.32□□□□□ -0.28
SH2B3-201ENST00000341259 SPTSSBQ8NFR3 76 aa13.32□□□□□ -0.28
SH2B3-201ENST00000341259 SEC61GP60059 68 aa13.32□□□□□ -0.28
SH2B3-201ENST00000341259 FN1P02751 2386 aaKnown RBP13.31□□□□□ -0.28
SH2B3-201ENST00000341259 Q9BRP9 147 aa13.31□□□□□ -0.28
SH2B3-201ENST00000341259 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
SH2B3-201ENST00000341259 NHLRC4P0CG21 123 aaPredicted RBP13.3□□□□□ -0.28
SH2B3-201ENST00000341259 H3BNG1 76 aa13.29□□□□□ -0.28
SH2B3-201ENST00000341259 SOSTDC1Q6X4U4 206 aa13.29□□□□□ -0.28
SH2B3-201ENST00000341259 C6orf48Q9UBA6 75 aa13.29□□□□□ -0.28
SH2B3-201ENST00000341259 TRAV7A0A075B6U4 112 aa13.29□□□□□ -0.28
SH2B3-201ENST00000341259 C22orf24Q9Y442 160 aa13.29□□□□□ -0.28
SH2B3-201ENST00000341259 A0A0U1RQV1 116 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 A0A096LNT2 108 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 C1orf134Q5TEV5 83 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 Q8N3U1 123 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 LINC00846Q9NV44 126 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 ZFYVE26Q68DK2 2539 aa13.28□□□□□ -0.28
SH2B3-201ENST00000341259 Q8NAQ8 132 aa13.27□□□□□ -0.28
SH2B3-201ENST00000341259 SBSPONQ8IVN8 264 aa13.27□□□□□ -0.29
SH2B3-201ENST00000341259 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
SH2B3-201ENST00000341259 DOPEY1Q5JWR5 2465 aa13.26□□□□□ -0.29
SH2B3-201ENST00000341259 PRR4Q16378 134 aa13.26□□□□□ -0.29
SH2B3-201ENST00000341259 SMCPP49901 116 aaPredicted RBP13.25□□□□□ -0.29
SH2B3-201ENST00000341259 PRLHP81277 87 aa13.24□□□□□ -0.29
SH2B3-201ENST00000341259 Q6ZVQ6 151 aa13.24□□□□□ -0.29
SH2B3-201ENST00000341259 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
SH2B3-201ENST00000341259 CDIP1Q9H305 208 aa13.24□□□□□ -0.29
SH2B3-201ENST00000341259 SMIM26A0A096LP01 95 aa13.23□□□□□ -0.29
SH2B3-201ENST00000341259 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
SH2B3-201ENST00000341259 ANKRD17O75179 2603 aaKnown RBP13.23□□□□□ -0.29
SH2B3-201ENST00000341259 POLQO75417 2590 aa13.23□□□□□ -0.29
SH2B3-201ENST00000341259 A0A087WSZ3 146 aa13.22□□□□□ -0.29
SH2B3-201ENST00000341259 FAM218AQ96MZ4 157 aa13.21□□□□□ -0.29
SH2B3-201ENST00000341259 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
SH2B3-201ENST00000341259 MDFIQ99750 246 aa13.21□□□□□ -0.3
SH2B3-201ENST00000341259 SERP1Q9Y6X1 66 aa13.21□□□□□ -0.3
SH2B3-201ENST00000341259 PRO0461Q9UI25 63 aa13.2□□□□□ -0.3
SH2B3-201ENST00000341259 SMCR5Q8TEV8 140 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms