RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
BRCC3-202ENST00000340647 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
BRCC3-202ENST00000340647 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
BRCC3-202ENST00000340647 A0A096LNJ9 63 aa10.33□□□□□ -0.76
BRCC3-202ENST00000340647 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
BRCC3-202ENST00000340647 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
BRCC3-202ENST00000340647 M0QXV9 152 aa10.32□□□□□ -0.76
BRCC3-202ENST00000340647 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
BRCC3-202ENST00000340647 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-202ENST00000340647 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
BRCC3-202ENST00000340647 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
BRCC3-202ENST00000340647 G0S2P27469 103 aa10.31□□□□□ -0.76
BRCC3-202ENST00000340647 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
BRCC3-202ENST00000340647 TINCRA0A1B0GVN0 87 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 KRTAP1-4P0C5Y4 121 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 S100PP25815 95 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
BRCC3-202ENST00000340647 LPAP08519 4548 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 PRSS2P07478 247 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 CKS1BP61024 79 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 SEC11AP67812 179 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 FABP9Q0Z7S8 132 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 RHEBQ15382 184 aa10.29□□□□□ -0.76
BRCC3-202ENST00000340647 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
BRCC3-202ENST00000340647 F8VRH5 84 aa10.28□□□□□ -0.76
BRCC3-202ENST00000340647 H0Y9J4 135 aa10.27□□□□□ -0.77
BRCC3-202ENST00000340647 COX19Q49B96 90 aa10.27□□□□□ -0.77
BRCC3-202ENST00000340647 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
BRCC3-202ENST00000340647 C22orf24Q9Y442 160 aa10.27□□□□□ -0.77
BRCC3-202ENST00000340647 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
BRCC3-202ENST00000340647 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
BRCC3-202ENST00000340647 SPINK8P0C7L1 97 aa10.25□□□□□ -0.77
BRCC3-202ENST00000340647 PMVKQ15126 192 aa10.25□□□□□ -0.77
BRCC3-202ENST00000340647 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
BRCC3-202ENST00000340647 DIRC1Q969H9 104 aa10.25□□□□□ -0.77
BRCC3-202ENST00000340647 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-202ENST00000340647 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
BRCC3-202ENST00000340647 LINC01549A6NIU2 74 aa10.23□□□□□ -0.77
BRCC3-202ENST00000340647 UBE2BP63146 152 aa10.23□□□□□ -0.77
BRCC3-202ENST00000340647 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
BRCC3-202ENST00000340647 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
BRCC3-202ENST00000340647 CXCL5P42830 114 aa10.22□□□□□ -0.77
BRCC3-202ENST00000340647 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
BRCC3-202ENST00000340647 TRAPPC1Q9Y5R8 145 aa10.22□□□□□ -0.77
BRCC3-202ENST00000340647 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.77
BRCC3-202ENST00000340647 SMCO4Q9NRQ5 59 aa10.21□□□□□ -0.77
BRCC3-202ENST00000340647 APOC3P02656 99 aa10.2□□□□□ -0.78
BRCC3-202ENST00000340647 LINC00614P0C842 121 aa10.2□□□□□ -0.78
BRCC3-202ENST00000340647 TP73-AS1Q9UF72 201 aa10.2□□□□□ -0.78
BRCC3-202ENST00000340647 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
BRCC3-202ENST00000340647 ZNF861PO60384 105 aa10.18□□□□□ -0.78
BRCC3-202ENST00000340647 MRPL55Q7Z7F7 128 aaKnown RBP10.18□□□□□ -0.78
BRCC3-202ENST00000340647 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
BRCC3-202ENST00000340647 RAB5BP61020 215 aa10.17□□□□□ -0.78
BRCC3-202ENST00000340647 IGLV5-37A0A075B6J1 123 aa10.16□□□□□ -0.78
BRCC3-202ENST00000340647 HBDP02042 147 aa10.16□□□□□ -0.78
BRCC3-202ENST00000340647 IGLV1-50A0A075B6I6 118 aa10.15□□□□□ -0.78
BRCC3-202ENST00000340647 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
BRCC3-202ENST00000340647 NUPR1O60356 82 aa10.15□□□□□ -0.78
BRCC3-202ENST00000340647 SCO1O75880 301 aa10.15□□□□□ -0.78
BRCC3-202ENST00000340647 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
BRCC3-202ENST00000340647 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
BRCC3-202ENST00000340647 Q8NDZ9 215 aa10.14□□□□□ -0.79
BRCC3-202ENST00000340647 H3BRM9 83 aa10.13□□□□□ -0.79
BRCC3-202ENST00000340647 SNAPINO95295 136 aa10.13□□□□□ -0.79
BRCC3-202ENST00000340647 NDUFA6P56556 154 aa10.13□□□□□ -0.79
BRCC3-202ENST00000340647 KRTAP13-1Q8IUC0 172 aa10.13□□□□□ -0.79
BRCC3-202ENST00000340647 SVBPQ8N300 66 aa10.13□□□□□ -0.79
BRCC3-202ENST00000340647 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
BRCC3-202ENST00000340647 BCE1O60756 84 aa10.12□□□□□ -0.79
BRCC3-202ENST00000340647 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
BRCC3-202ENST00000340647 A0A087X002 238 aa10.1□□□□□ -0.79
BRCC3-202ENST00000340647 PFN2P35080 140 aa10.1□□□□□ -0.79
BRCC3-202ENST00000340647 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
BRCC3-202ENST00000340647 ATP5LO75964 103 aa10.09□□□□□ -0.79
BRCC3-202ENST00000340647 VPREB1P12018 145 aa10.09□□□□□ -0.79
BRCC3-202ENST00000340647 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
BRCC3-202ENST00000340647 ERG28Q9UKR5 140 aa10.08□□□□□ -0.8
BRCC3-202ENST00000340647 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
BRCC3-202ENST00000340647 LINC00310P59036 64 aa10.06□□□□□ -0.8
BRCC3-202ENST00000340647 NDUFA5Q16718 116 aa10.06□□□□□ -0.8
BRCC3-202ENST00000340647 ANAPC11Q9NYG5 84 aa10.06□□□□□ -0.8
BRCC3-202ENST00000340647 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
BRCC3-202ENST00000340647 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
BRCC3-202ENST00000340647 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
BRCC3-202ENST00000340647 CHTOPQ9Y3Y2 248 aaKnown RBP10.05□□□□□ -0.8
BRCC3-202ENST00000340647 IGKV2-28A0A075B6P5 120 aa10.04□□□□□ -0.8
BRCC3-202ENST00000340647 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
BRCC3-202ENST00000340647 IGKV2D-28P01615 120 aa10.04□□□□□ -0.8
BRCC3-202ENST00000340647 RPL28P46779 137 aaKnown RBP10.04□□□□□ -0.8
BRCC3-202ENST00000340647 COX17Q14061 63 aa10.04□□□□□ -0.8
BRCC3-202ENST00000340647 IFI27L1Q96BM0 104 aa10.04□□□□□ -0.8
BRCC3-202ENST00000340647 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
BRCC3-202ENST00000340647 KRTAP13-2Q52LG2 175 aa10.03□□□□□ -0.8
BRCC3-202ENST00000340647 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
BRCC3-202ENST00000340647 NKAPP1Q8N9T2 125 aa10.03□□□□□ -0.8
BRCC3-202ENST00000340647 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
BRCC3-202ENST00000340647 M0R378 163 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms