RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
BRAT1-201ENST00000340611 Q9HAA7 133 aa10.77□□□□□ -0.69
BRAT1-201ENST00000340611 SPANXDQ9BXN6 97 aa10.77□□□□□ -0.69
BRAT1-201ENST00000340611 IGHV1OR15-1A0A075B7D0 117 aa10.76□□□□□ -0.69
BRAT1-201ENST00000340611 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
BRAT1-201ENST00000340611 GIG44P09565 113 aaPredicted RBP10.76□□□□□ -0.69
BRAT1-201ENST00000340611 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
BRAT1-201ENST00000340611 MDFIQ99750 246 aa10.75□□□□□ -0.69
BRAT1-201ENST00000340611 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
BRAT1-201ENST00000340611 A8MTW9 85 aa10.74□□□□□ -0.69
BRAT1-201ENST00000340611 C1orf158Q8N1D5 194 aa10.74□□□□□ -0.69
BRAT1-201ENST00000340611 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
BRAT1-201ENST00000340611 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
BRAT1-201ENST00000340611 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
BRAT1-201ENST00000340611 LINC01561Q8N1V8 128 aa10.73□□□□□ -0.69
BRAT1-201ENST00000340611 V9GYY9 64 aa10.73□□□□□ -0.69
BRAT1-201ENST00000340611 MIAQ16674 131 aa10.72□□□□□ -0.69
BRAT1-201ENST00000340611 C20orf197Q8N268 126 aa10.72□□□□□ -0.69
BRAT1-201ENST00000340611 BRK1Q8WUW1 75 aa10.72□□□□□ -0.69
BRAT1-201ENST00000340611 Q9UF83 564 aa10.72□□□□□ -0.69
BRAT1-201ENST00000340611 DNAL4O96015 105 aa10.71□□□□□ -0.69
BRAT1-201ENST00000340611 INSP01308 110 aa10.71□□□□□ -0.69
BRAT1-201ENST00000340611 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
BRAT1-201ENST00000340611 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
BRAT1-201ENST00000340611 KRTAP10-11P60412 298 aa10.71□□□□□ -0.7
BRAT1-201ENST00000340611 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
BRAT1-201ENST00000340611 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
BRAT1-201ENST00000340611 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
BRAT1-201ENST00000340611 FAM218AQ96MZ4 157 aa10.69□□□□□ -0.7
BRAT1-201ENST00000340611 LINC00846Q9NV44 126 aa10.69□□□□□ -0.7
BRAT1-201ENST00000340611 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
BRAT1-201ENST00000340611 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
BRAT1-201ENST00000340611 COX7A2LO14548 114 aa10.68□□□□□ -0.7
BRAT1-201ENST00000340611 TENM3Q9P273 2699 aa10.68□□□□□ -0.7
BRAT1-201ENST00000340611 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
BRAT1-201ENST00000340611 C1orf195Q5TG92 126 aa10.68□□□□□ -0.7
BRAT1-201ENST00000340611 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
BRAT1-201ENST00000340611 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
BRAT1-201ENST00000340611 GHRHP01286 108 aa10.67□□□□□ -0.7
BRAT1-201ENST00000340611 VSIG2Q96IQ7 327 aa10.66□□□□□ -0.7
BRAT1-201ENST00000340611 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
BRAT1-201ENST00000340611 C11orf72Q8NBR9 251 aa10.66□□□□□ -0.7
BRAT1-201ENST00000340611 CSNK1G2-AS1Q8NCQ2 148 aa10.66□□□□□ -0.7
BRAT1-201ENST00000340611 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
BRAT1-201ENST00000340611 DEFB4AO15263 64 aa10.65□□□□□ -0.7
BRAT1-201ENST00000340611 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
BRAT1-201ENST00000340611 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
BRAT1-201ENST00000340611 LINC00474Q9P2X8 69 aa10.64□□□□□ -0.71
BRAT1-201ENST00000340611 IGHV4-30-4P0DP06 118 aa10.64□□□□□ -0.71
BRAT1-201ENST00000340611 Q6ZSN1 163 aa10.64□□□□□ -0.71
BRAT1-201ENST00000340611 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
BRAT1-201ENST00000340611 NOP10Q9NPE3 64 aaKnown RBP10.63□□□□□ -0.71
BRAT1-201ENST00000340611 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
BRAT1-201ENST00000340611 Q6ZTI0 123 aa10.62□□□□□ -0.71
BRAT1-201ENST00000340611 IL17DQ8TAD2 202 aa10.62□□□□□ -0.71
BRAT1-201ENST00000340611 TRGV1A0A0A0MS02 117 aa10.61□□□□□ -0.71
BRAT1-201ENST00000340611 RPL28P46779 137 aaKnown RBP10.61□□□□□ -0.71
BRAT1-201ENST00000340611 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
BRAT1-201ENST00000340611 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
BRAT1-201ENST00000340611 CHCHD7Q9BUK0 85 aa10.61□□□□□ -0.71
BRAT1-201ENST00000340611 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
BRAT1-201ENST00000340611 PLAC8L1A1L4L8 177 aa10.6□□□□□ -0.71
BRAT1-201ENST00000340611 NDUFC2O95298 119 aa10.6□□□□□ -0.71
BRAT1-201ENST00000340611 XCL1P47992 114 aa10.6□□□□□ -0.71
BRAT1-201ENST00000340611 Q6JHZ5 121 aa10.6□□□□□ -0.71
BRAT1-201ENST00000340611 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
BRAT1-201ENST00000340611 NCR3O14931 201 aa10.59□□□□□ -0.71
BRAT1-201ENST00000340611 SS18Q15532 418 aa10.59□□□□□ -0.71
BRAT1-201ENST00000340611 LINC00308Q8TCZ7 52 aa10.59□□□□□ -0.71
BRAT1-201ENST00000340611 SNURFQ9Y675 71 aa10.59□□□□□ -0.71
BRAT1-201ENST00000340611 RETNQ9HD89 108 aa10.58□□□□□ -0.72
BRAT1-201ENST00000340611 SERP1Q9Y6X1 66 aa10.58□□□□□ -0.72
BRAT1-201ENST00000340611 DNAH3Q8TD57 4116 aa10.58□□□□□ -0.72
BRAT1-201ENST00000340611 DNHD1Q96M86 4753 aa10.57□□□□□ -0.72
BRAT1-201ENST00000340611 COX6A2Q02221 97 aa10.57□□□□□ -0.72
BRAT1-201ENST00000340611 Q9H8V8 135 aa10.57□□□□□ -0.72
BRAT1-201ENST00000340611 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
BRAT1-201ENST00000340611 X6R8D5 127 aa10.57□□□□□ -0.72
BRAT1-201ENST00000340611 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
BRAT1-201ENST00000340611 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
BRAT1-201ENST00000340611 SLPIP03973 132 aa10.55□□□□□ -0.72
BRAT1-201ENST00000340611 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
BRAT1-201ENST00000340611 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
BRAT1-201ENST00000340611 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
BRAT1-201ENST00000340611 RBM3P98179 157 aaKnown RBP10.55□□□□□ -0.72
BRAT1-201ENST00000340611 DGAT2L7PQ6IED9 249 aa10.55□□□□□ -0.72
BRAT1-201ENST00000340611 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
BRAT1-201ENST00000340611 A0A087WYN8 130 aa10.54□□□□□ -0.72
BRAT1-201ENST00000340611 NDUFA1O15239 70 aa10.54□□□□□ -0.72
BRAT1-201ENST00000340611 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
BRAT1-201ENST00000340611 H7BZZ5 65 aa10.53□□□□□ -0.72
BRAT1-201ENST00000340611 TIMM17BO60830 172 aa10.53□□□□□ -0.72
BRAT1-201ENST00000340611 RMI2Q96E14 147 aa10.53□□□□□ -0.72
BRAT1-201ENST00000340611 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
BRAT1-201ENST00000340611 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.72
BRAT1-201ENST00000340611 COL7A1Q02388 2944 aa10.52□□□□□ -0.73
BRAT1-201ENST00000340611 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.73
BRAT1-201ENST00000340611 NDUFC2-KCTD14E9PQ53 114 aa10.52□□□□□ -0.73
BRAT1-201ENST00000340611 APOC4P55056 127 aa10.52□□□□□ -0.73
BRAT1-201ENST00000340611 FAM222AQ5U5X8 452 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms