RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 SLC25A34Q6PIV7 304 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 PLEKHB2Q96CS7 222 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
SDCBP2-201ENST00000339987 CXCL5P42830 114 aa11.66□□□□□ -0.54
SDCBP2-201ENST00000339987 NMUP48645 174 aa11.66□□□□□ -0.54
SDCBP2-201ENST00000339987 C14orf144Q96I85 54 aa11.66□□□□□ -0.54
SDCBP2-201ENST00000339987 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
SDCBP2-201ENST00000339987 SLPIP03973 132 aa11.65□□□□□ -0.54
SDCBP2-201ENST00000339987 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
SDCBP2-201ENST00000339987 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
SDCBP2-201ENST00000339987 NDUFA1O15239 70 aa11.64□□□□□ -0.55
SDCBP2-201ENST00000339987 COX8AP10176 69 aa11.64□□□□□ -0.55
SDCBP2-201ENST00000339987 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
SDCBP2-201ENST00000339987 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
SDCBP2-201ENST00000339987 J3QQQ9 107 aa11.63□□□□□ -0.55
SDCBP2-201ENST00000339987 CKS1BP61024 79 aa11.63□□□□□ -0.55
SDCBP2-201ENST00000339987 SFTA2Q6UW10 78 aa11.63□□□□□ -0.55
SDCBP2-201ENST00000339987 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 TSPEAR-AS2P59090 65 aa11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 CARD19Q96LW7 228 aa11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 FAT2Q9NYQ8 4349 aa11.62□□□□□ -0.55
SDCBP2-201ENST00000339987 UNQ6190/PRO20217Q6UXQ8 127 aa11.61□□□□□ -0.55
SDCBP2-201ENST00000339987 Q6ZRU5 148 aa11.61□□□□□ -0.55
SDCBP2-201ENST00000339987 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
SDCBP2-201ENST00000339987 IGKV2D-26A0A0A0MRZ7 120 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 DLEU1O43261 78 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 C10orf25Q5T742 122 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 TRBV30A0A0K0K1B3 111 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 KRTAP10-2P60368 255 aa11.6□□□□□ -0.55
SDCBP2-201ENST00000339987 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
SDCBP2-201ENST00000339987 C9orf163Q8N9P6 203 aa11.59□□□□□ -0.55
SDCBP2-201ENST00000339987 C6orf48Q9UBA6 75 aa11.59□□□□□ -0.55
SDCBP2-201ENST00000339987 NDUFA12Q9UI09 145 aa11.59□□□□□ -0.55
SDCBP2-201ENST00000339987 LINC00587B1AMM8 73 aa11.58□□□□□ -0.56
SDCBP2-201ENST00000339987 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
SDCBP2-201ENST00000339987 MYMXA0A1B0GTQ4 84 aa11.57□□□□□ -0.56
SDCBP2-201ENST00000339987 HERV-K104P63124 156 aa11.56□□□□□ -0.56
SDCBP2-201ENST00000339987 DNAH11Q96DT5 4516 aa11.55□□□□□ -0.56
SDCBP2-201ENST00000339987 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDCBP2-201ENST00000339987 PCP2Q8IVA1 136 aa11.55□□□□□ -0.56
SDCBP2-201ENST00000339987 PKIGQ9Y2B9 76 aa11.54□□□□□ -0.56
SDCBP2-201ENST00000339987 ZNF815PA8K554 130 aa11.52□□□□□ -0.56
SDCBP2-201ENST00000339987 TLX1NBP0CAT3 122 aa11.52□□□□□ -0.56
SDCBP2-201ENST00000339987 CTAG1AP78358 180 aa11.52□□□□□ -0.56
SDCBP2-201ENST00000339987 TTTY13Q9BZ97 58 aa11.52□□□□□ -0.56
SDCBP2-201ENST00000339987 HECTD4Q9Y4D8 3996 aa11.52□□□□□ -0.57
SDCBP2-201ENST00000339987 M0R143 59 aa11.52□□□□□ -0.57
SDCBP2-201ENST00000339987 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
SDCBP2-201ENST00000339987 PKD1P98161 4303 aa11.51□□□□□ -0.57
SDCBP2-201ENST00000339987 LOC107984640A0A0U1RRK4 108 aa11.51□□□□□ -0.57
SDCBP2-201ENST00000339987 GCSHP23434 173 aa11.51□□□□□ -0.57
SDCBP2-201ENST00000339987 HIGD1BQ9P298 99 aa11.51□□□□□ -0.57
SDCBP2-201ENST00000339987 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
SDCBP2-201ENST00000339987 NDUFC2-KCTD14E9PQ53 114 aa11.5□□□□□ -0.57
SDCBP2-201ENST00000339987 COX17Q14061 63 aa11.5□□□□□ -0.57
SDCBP2-201ENST00000339987 LINC01620Q4KN68 170 aa11.5□□□□□ -0.57
SDCBP2-201ENST00000339987 SCGB1D4Q6XE38 83 aa11.5□□□□□ -0.57
SDCBP2-201ENST00000339987 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
SDCBP2-201ENST00000339987 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
SDCBP2-201ENST00000339987 MEIG1Q5JSS6 88 aa11.48□□□□□ -0.57
SDCBP2-201ENST00000339987 PFN2P35080 140 aa11.47□□□□□ -0.57
SDCBP2-201ENST00000339987 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
SDCBP2-201ENST00000339987 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
SDCBP2-201ENST00000339987 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
SDCBP2-201ENST00000339987 RPL18AQ02543 176 aaKnown RBP11.46□□□□□ -0.57
SDCBP2-201ENST00000339987 HSD52Q0P140 79 aa11.46□□□□□ -0.57
SDCBP2-201ENST00000339987 LBHQ53QV2 105 aaPredicted RBP11.46□□□□□ -0.57
SDCBP2-201ENST00000339987 Q6ZRP5 223 aa11.46□□□□□ -0.57
SDCBP2-201ENST00000339987 TIMM17BO60830 172 aa11.45□□□□□ -0.58
SDCBP2-201ENST00000339987 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
SDCBP2-201ENST00000339987 LINC00158P58513 81 aa11.45□□□□□ -0.58
SDCBP2-201ENST00000339987 A0A096LNI7 61 aa11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 BATFQ16520 125 aa11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 DNAH5Q8TE73 4624 aa11.44□□□□□ -0.58
SDCBP2-201ENST00000339987 GAGE2BQ13066 116 aa11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 HERC2O95714 4834 aa11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 HINT1P49773 126 aaPredicted RBP11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 TAL2Q16559 108 aa11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 LITAFQ99732 161 aa11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 LINC00474Q9P2X8 69 aa11.43□□□□□ -0.58
SDCBP2-201ENST00000339987 A0A0U1RRA0 63 aa11.42□□□□□ -0.58
SDCBP2-201ENST00000339987 GAGE2EQ4V326 116 aa11.42□□□□□ -0.58
SDCBP2-201ENST00000339987 SNHG12Q9BXW3 62 aa11.42□□□□□ -0.58
SDCBP2-201ENST00000339987 GAGE2DQ9UEU5 116 aa11.42□□□□□ -0.58
SDCBP2-201ENST00000339987 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
SDCBP2-201ENST00000339987 Q6ZSA8 131 aa11.41□□□□□ -0.58
SDCBP2-201ENST00000339987 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
SDCBP2-201ENST00000339987 HIST1H4GQ99525 98 aa11.41□□□□□ -0.58
SDCBP2-201ENST00000339987 IGKV2-24A0A0C4DH68 120 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms