RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 KRTAP7-1Q8IUC3 87 aa9.39□□□□□ -0.91
LINC01116-202ENST00000339037 ADCYAP1P18509 176 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 PRR4Q16378 134 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 AMELXQ99217 191 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 C2orf88Q9BSF0 95 aa9.38□□□□□ -0.91
LINC01116-202ENST00000339037 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
LINC01116-202ENST00000339037 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
LINC01116-202ENST00000339037 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
LINC01116-202ENST00000339037 Q6ZN92 141 aa9.36□□□□□ -0.91
LINC01116-202ENST00000339037 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
LINC01116-202ENST00000339037 K7EMI3 77 aa9.35□□□□□ -0.91
LINC01116-202ENST00000339037 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
LINC01116-202ENST00000339037 PACRGQ96M98 296 aaPredicted RBP9.35□□□□□ -0.91
LINC01116-202ENST00000339037 VCX2Q9H322 139 aa9.35□□□□□ -0.91
LINC01116-202ENST00000339037 NXT2Q9NPJ8 142 aaKnown RBP9.35□□□□□ -0.91
LINC01116-202ENST00000339037 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
LINC01116-202ENST00000339037 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
LINC01116-202ENST00000339037 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
LINC01116-202ENST00000339037 NPSP0C0P6 89 aa9.33□□□□□ -0.92
LINC01116-202ENST00000339037 TOMM7Q9P0U1 55 aa9.33□□□□□ -0.92
LINC01116-202ENST00000339037 IFITM2Q01629 132 aa9.32□□□□□ -0.92
LINC01116-202ENST00000339037 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
LINC01116-202ENST00000339037 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 ZNF861PO60384 105 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 UQCC3Q6UW78 93 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 TOMM6Q96B49 74 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 TIMM17AQ99595 171 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
LINC01116-202ENST00000339037 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
LINC01116-202ENST00000339037 PRSS2P07478 247 aa9.3□□□□□ -0.92
LINC01116-202ENST00000339037 KRTAP19-4Q3LI73 84 aa9.3□□□□□ -0.92
LINC01116-202ENST00000339037 Q8IZM0 81 aa9.3□□□□□ -0.92
LINC01116-202ENST00000339037 TRAV9-1A0A075B6T8 112 aa9.29□□□□□ -0.92
LINC01116-202ENST00000339037 CKS1BP61024 79 aa9.29□□□□□ -0.92
LINC01116-202ENST00000339037 HERVK_113P63121 156 aa9.29□□□□□ -0.92
LINC01116-202ENST00000339037 NUPR1O60356 82 aa9.28□□□□□ -0.92
LINC01116-202ENST00000339037 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
LINC01116-202ENST00000339037 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
LINC01116-202ENST00000339037 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
LINC01116-202ENST00000339037 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
LINC01116-202ENST00000339037 G0S2P27469 103 aa9.27□□□□□ -0.93
LINC01116-202ENST00000339037 SEC11AP67812 179 aa9.27□□□□□ -0.93
LINC01116-202ENST00000339037 ERASQ7Z444 233 aa9.27□□□□□ -0.93
LINC01116-202ENST00000339037 SEC11CQ9BY50 192 aa9.27□□□□□ -0.93
LINC01116-202ENST00000339037 GEMIN7Q9H840 131 aaKnown RBP9.27□□□□□ -0.93
LINC01116-202ENST00000339037 C22orf24Q9Y442 160 aa9.27□□□□□ -0.93
LINC01116-202ENST00000339037 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
LINC01116-202ENST00000339037 TSPAN13O95857 204 aa9.26□□□□□ -0.93
LINC01116-202ENST00000339037 LBHQ53QV2 105 aaPredicted RBP9.26□□□□□ -0.93
LINC01116-202ENST00000339037 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
LINC01116-202ENST00000339037 GNB1LQ9BYB4 327 aa9.26□□□□□ -0.93
LINC01116-202ENST00000339037 XAGE1AQ9HD64 81 aa9.26□□□□□ -0.93
LINC01116-202ENST00000339037 LINC01546A6NGU7 62 aa9.25□□□□□ -0.93
LINC01116-202ENST00000339037 SMIM1B2RUZ4 78 aa9.24□□□□□ -0.93
LINC01116-202ENST00000339037 F8VRH5 84 aa9.24□□□□□ -0.93
LINC01116-202ENST00000339037 S100PP25815 95 aa9.24□□□□□ -0.93
LINC01116-202ENST00000339037 A0A087X002 238 aa9.23□□□□□ -0.93
LINC01116-202ENST00000339037 COMMD7Q86VX2 200 aa9.23□□□□□ -0.93
LINC01116-202ENST00000339037 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
LINC01116-202ENST00000339037 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
LINC01116-202ENST00000339037 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
LINC01116-202ENST00000339037 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
LINC01116-202ENST00000339037 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
LINC01116-202ENST00000339037 CRYGAP11844 174 aa9.21□□□□□ -0.94
LINC01116-202ENST00000339037 CXCL5P42830 114 aa9.21□□□□□ -0.94
LINC01116-202ENST00000339037 COX7B2Q8TF08 81 aa9.21□□□□□ -0.94
LINC01116-202ENST00000339037 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.94
LINC01116-202ENST00000339037 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
LINC01116-202ENST00000339037 BCE1O60756 84 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 COX19Q49B96 90 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 PDZD11Q5EBL8 140 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 C10orf91Q5T1B1 145 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 TYMSOSQ8TAI1 123 aa9.2□□□□□ -0.94
LINC01116-202ENST00000339037 KRTAP23-1A1A580 65 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 PMVKQ15126 192 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 FA2HQ7L5A8 372 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 RPS10P5Q9NQ39 176 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 SMCO4Q9NRQ5 59 aa9.19□□□□□ -0.94
LINC01116-202ENST00000339037 RHEBQ15382 184 aa9.18□□□□□ -0.94
LINC01116-202ENST00000339037 A0A096LNJ9 63 aa9.17□□□□□ -0.94
LINC01116-202ENST00000339037 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
LINC01116-202ENST00000339037 URB1-AS1Q96HZ7 61 aa9.16□□□□□ -0.94
LINC01116-202ENST00000339037 RAB5BP61020 215 aa9.15□□□□□ -0.94
LINC01116-202ENST00000339037 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
LINC01116-202ENST00000339037 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
LINC01116-202ENST00000339037 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
LINC01116-202ENST00000339037 KRTAP19-1Q8IUB9 90 aa9.14□□□□□ -0.95
LINC01116-202ENST00000339037 C18orf32Q8TCD1 76 aa9.14□□□□□ -0.95
LINC01116-202ENST00000339037 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
LINC01116-202ENST00000339037 H3BRM9 83 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 UBE2AP49459 152 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 NDUFA6P56556 154 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 RETNLBQ9BQ08 111 aa9.12□□□□□ -0.95
LINC01116-202ENST00000339037 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms