RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 DAZ3Q9NR90 486 aaKnown RBP5.89□□□□□ -1.47
HPS4-201ENST00000336873 NTM-AS1Q6ZSK4 140 aa5.89□□□□□ -1.47
HPS4-201ENST00000336873 XAGE1AQ9HD64 81 aa5.89□□□□□ -1.47
HPS4-201ENST00000336873 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
HPS4-201ENST00000336873 H7C423 109 aa5.88□□□□□ -1.47
HPS4-201ENST00000336873 C16orf74Q96GX8 76 aa5.88□□□□□ -1.47
HPS4-201ENST00000336873 DSCR8Q96T75 97 aa5.88□□□□□ -1.47
HPS4-201ENST00000336873 ANK3Q12955 4377 aaKnown RBP5.88□□□□□ -1.47
HPS4-201ENST00000336873 A8MTW9 85 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 UBE2D3P61077 147 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 UBE2D2P62837 147 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 RNF152Q8N8N0 203 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 ODF3Q96PU9 254 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 PRO0461Q9UI25 63 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 A0A0B4J2C4 111 aa5.87□□□□□ -1.47
HPS4-201ENST00000336873 SMIM1B2RUZ4 78 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 CMC4P56277 68 aaPredicted RBP5.86□□□□□ -1.47
HPS4-201ENST00000336873 C11orf72Q8NBR9 251 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 A0A1B0GX51 115 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 HAMPP81172 84 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
HPS4-201ENST00000336873 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 DPH3Q96FX2 82 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 PYGO1Q9Y3Y4 419 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 DEFB105AQ8NG35 78 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 AMELXQ99217 191 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
HPS4-201ENST00000336873 CR1P17927 2039 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 RPL18AQ02543 176 aaKnown RBP5.84□□□□□ -1.47
HPS4-201ENST00000336873 Q6Q795 121 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 TENM1Q9UKZ4 2725 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 TRBV10-1A0A0K0K1A3 114 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 WFDC9Q8NEX5 89 aa5.84□□□□□ -1.47
HPS4-201ENST00000336873 H3BT86 120 aa5.84□□□□□ -1.48
HPS4-201ENST00000336873 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.48
HPS4-201ENST00000336873 SPANXCQ9NY87 97 aa5.84□□□□□ -1.48
HPS4-201ENST00000336873 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 ZNF561-AS1K7EIQ3 104 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 NDUFA1O15239 70 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 LY6G6DO95868 133 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 IGKV2D-24A0A075B6R9 120 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 TRBV30A0A0K0K1B3 111 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 RETNQ9HD89 108 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 PRO0255Q9UI72 69 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 COX7A2LO14548 114 aa5.83□□□□□ -1.48
HPS4-201ENST00000336873 CCL18P55774 89 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 C6orf223Q8N319 242 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 ATOX1O00244 68 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 INAFM2P0DMQ5 153 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 REG3AQ06141 175 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 CHCHD10Q8WYQ3 142 aaPredicted RBP5.82□□□□□ -1.48
HPS4-201ENST00000336873 OTOGQ6ZRI0 2925 aa5.82□□□□□ -1.48
HPS4-201ENST00000336873 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 LST1O00453 97 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 A0A087WYN8 130 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 LINC00959A0A1B0GUT2 108 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 A0A087WVE0 104 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 COX7CP15954 63 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 TIRAPP58753 221 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 RBM3P98179 157 aaKnown RBP5.81□□□□□ -1.48
HPS4-201ENST00000336873 SPAG11BQ08648 103 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 SCXQ7RTU7 201 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 LINC00337Q8N6G1 96 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 SPATA3Q8NHX4 192 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 OVOL2Q9BRP0 275 aa5.81□□□□□ -1.48
HPS4-201ENST00000336873 C6orf99Q4VX62 202 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 KIR2DL5BQ8NHK3 375 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 FHL2Q14192 279 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
HPS4-201ENST00000336873 KMT2BQ9UMN6 2715 aaPredicted RBP5.8□□□□□ -1.48
HPS4-201ENST00000336873 IGLV1-51P01701 117 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 KLK9Q2XQG4 91 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 UNQ6190/PRO20217Q6UXQ8 127 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 A0A096LNT2 108 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 F8WDY8 70 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 HILS1P60008 231 aa5.79□□□□□ -1.48
HPS4-201ENST00000336873 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 ACYP1P07311 99 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 CAMK2N2Q96S95 79 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 WIPF1O43516 503 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 NDUFC2O95298 119 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 SPART-AS1P0CW21 52 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 APOC4P55056 127 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 TMEM258P61165 79 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 LITAFQ99732 161 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 TRAV23DV6A0A075B6W5 121 aa5.78□□□□□ -1.48
HPS4-201ENST00000336873 BEAN1Q3B7T3 259 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms