RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CDC42SE2Q9NRR3 84 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 HIVEP1P15822 2718 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 PF4P02776 101 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 NTM-AS1Q6ZSK4 140 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 V9GYY9 64 aa9.78□□□□□ -0.84
SYNE3-201ENST00000334258 LECT2O14960 151 aa9.77□□□□□ -0.85
SYNE3-201ENST00000334258 PAX4O43316 350 aa9.77□□□□□ -0.85
SYNE3-201ENST00000334258 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
SYNE3-201ENST00000334258 C9orf129Q5T035 196 aaKnown RBP9.77□□□□□ -0.85
SYNE3-201ENST00000334258 VWFP04275 2813 aa9.77□□□□□ -0.85
SYNE3-201ENST00000334258 A0A087WVE0 104 aa9.77□□□□□ -0.85
SYNE3-201ENST00000334258 J3QKU1 62 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 COX7B2Q8TF08 81 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 K7EQD1 137 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 NCR3O14931 201 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 SLPIP03973 132 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
SYNE3-201ENST00000334258 Q6ZTI0 123 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
SYNE3-201ENST00000334258 HIST1H4AP62805 103 aaKnown RBP9.75□□□□□ -0.85
SYNE3-201ENST00000334258 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
SYNE3-201ENST00000334258 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
SYNE3-201ENST00000334258 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
SYNE3-201ENST00000334258 TENM1Q9UKZ4 2725 aa9.75□□□□□ -0.85
SYNE3-201ENST00000334258 STHQ8IWL8 128 aa9.74□□□□□ -0.85
SYNE3-201ENST00000334258 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
SYNE3-201ENST00000334258 A0A1W2PRX2 142 aa9.73□□□□□ -0.85
SYNE3-201ENST00000334258 H0YGX0 51 aa9.73□□□□□ -0.85
SYNE3-201ENST00000334258 DSCR9P59020 149 aa9.73□□□□□ -0.85
SYNE3-201ENST00000334258 KRTAP1-3Q8IUG1 177 aa9.73□□□□□ -0.85
SYNE3-201ENST00000334258 CCL18P55774 89 aa9.73□□□□□ -0.85
SYNE3-201ENST00000334258 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
SYNE3-201ENST00000334258 A8MTW9 85 aa9.72□□□□□ -0.85
SYNE3-201ENST00000334258 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
SYNE3-201ENST00000334258 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
SYNE3-201ENST00000334258 ZNF702PQ9H963 129 aa9.71□□□□□ -0.85
SYNE3-201ENST00000334258 SERP2Q8N6R1 65 aa9.71□□□□□ -0.86
SYNE3-201ENST00000334258 F8P00451 2351 aa9.71□□□□□ -0.86
SYNE3-201ENST00000334258 USP17L23D6RBM5 183 aa9.71□□□□□ -0.86
SYNE3-201ENST00000334258 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
SYNE3-201ENST00000334258 Q6JHZ5 121 aa9.7□□□□□ -0.86
SYNE3-201ENST00000334258 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
SYNE3-201ENST00000334258 LOC100131303A0A0U1RQF7 123 aa9.69□□□□□ -0.86
SYNE3-201ENST00000334258 RNASE1P07998 156 aaKnown RBP9.69□□□□□ -0.86
SYNE3-201ENST00000334258 DEFB114Q30KQ6 69 aa9.69□□□□□ -0.86
SYNE3-201ENST00000334258 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
SYNE3-201ENST00000334258 BRK1Q8WUW1 75 aa9.69□□□□□ -0.86
SYNE3-201ENST00000334258 NSD1Q96L73 2696 aaPredicted RBP9.68□□□□□ -0.86
SYNE3-201ENST00000334258 FHL2Q14192 279 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 IL17DQ8TAD2 202 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 ORMDL1Q9P0S3 153 aa9.68□□□□□ -0.86
SYNE3-201ENST00000334258 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
SYNE3-201ENST00000334258 ANK3Q12955 4377 aaKnown RBP9.67□□□□□ -0.86
SYNE3-201ENST00000334258 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
SYNE3-201ENST00000334258 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
SYNE3-201ENST00000334258 WFDC9Q8NEX5 89 aa9.66□□□□□ -0.86
SYNE3-201ENST00000334258 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
SYNE3-201ENST00000334258 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.86
SYNE3-201ENST00000334258 Q6YL49 198 aa9.65□□□□□ -0.86
SYNE3-201ENST00000334258 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
SYNE3-201ENST00000334258 HILS1P60008 231 aa9.64□□□□□ -0.87
SYNE3-201ENST00000334258 ESM1Q9NQ30 184 aa9.64□□□□□ -0.87
SYNE3-201ENST00000334258 IGHV3OR16-9A0A0B4J2B5 98 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 XCL1P47992 114 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 C4orf3Q8WVX3 66 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 GHRHP01286 108 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 CCKP06307 115 aa9.62□□□□□ -0.87
SYNE3-201ENST00000334258 PRR3P79522 188 aaKnown RBP9.62□□□□□ -0.87
SYNE3-201ENST00000334258 TRBV6-4A0A1B0GX49 114 aa9.61□□□□□ -0.87
SYNE3-201ENST00000334258 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
SYNE3-201ENST00000334258 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 DNAJC9-AS1A6NH13 148 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 C20orf197Q8N268 126 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 A0A087WZ39 114 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 LINC00482Q8N8I6 264 aa9.6□□□□□ -0.87
SYNE3-201ENST00000334258 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
SYNE3-201ENST00000334258 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
SYNE3-201ENST00000334258 MAST4O15021 2626 aa9.59□□□□□ -0.87
SYNE3-201ENST00000334258 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
SYNE3-201ENST00000334258 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
SYNE3-201ENST00000334258 FSHBP01225 129 aa9.57□□□□□ -0.88
SYNE3-201ENST00000334258 TMEM256-PLSCR3K7ERE1 68 aa9.57□□□□□ -0.88
SYNE3-201ENST00000334258 WFDC10AQ9H1F0 79 aa9.57□□□□□ -0.88
SYNE3-201ENST00000334258 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
SYNE3-201ENST00000334258 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
SYNE3-201ENST00000334258 SS18Q15532 418 aa9.56□□□□□ -0.88
SYNE3-201ENST00000334258 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
SYNE3-201ENST00000334258 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
SYNE3-201ENST00000334258 Q8N814 137 aa9.56□□□□□ -0.88
SYNE3-201ENST00000334258 KRTAP1-1Q07627 177 aa9.55□□□□□ -0.88
SYNE3-201ENST00000334258 FP248Q71RG6 208 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms