RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OVOL2Q9BRP0 275 aa8.59□□□□□ -1.03
VPS33B-201ENST00000333371 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
VPS33B-201ENST00000333371 XCL1P47992 114 aa8.58□□□□□ -1.04
VPS33B-201ENST00000333371 FAM110AQ9BQ89 295 aa8.58□□□□□ -1.04
VPS33B-201ENST00000333371 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
VPS33B-201ENST00000333371 KRTAP10-3P60369 221 aa8.58□□□□□ -1.04
VPS33B-201ENST00000333371 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
VPS33B-201ENST00000333371 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
VPS33B-201ENST00000333371 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
VPS33B-201ENST00000333371 MRPL23Q16540 153 aaKnown RBP8.57□□□□□ -1.04
VPS33B-201ENST00000333371 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
VPS33B-201ENST00000333371 TRBV7-7A0A0K0K1E9 115 aa8.57□□□□□ -1.04
VPS33B-201ENST00000333371 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 PAX4O43316 350 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 SLPIP03973 132 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 MALP21145 153 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 OR13C6PQ8NH95 151 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 A0A087WZ39 114 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 GYPEP15421 78 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 Q8N3U1 123 aa8.56□□□□□ -1.04
VPS33B-201ENST00000333371 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
VPS33B-201ENST00000333371 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
VPS33B-201ENST00000333371 LINC00482Q8N8I6 264 aa8.55□□□□□ -1.04
VPS33B-201ENST00000333371 C14orf132Q9NPU4 83 aa8.55□□□□□ -1.04
VPS33B-201ENST00000333371 OTOGQ6ZRI0 2925 aa8.55□□□□□ -1.04
VPS33B-201ENST00000333371 LECT2O14960 151 aa8.54□□□□□ -1.04
VPS33B-201ENST00000333371 DEFB4AO15263 64 aa8.54□□□□□ -1.04
VPS33B-201ENST00000333371 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
VPS33B-201ENST00000333371 SPATA3Q8NHX4 192 aa8.54□□□□□ -1.04
VPS33B-201ENST00000333371 NSD1Q96L73 2696 aaPredicted RBP8.53□□□□□ -1.04
VPS33B-201ENST00000333371 DNAL4O96015 105 aa8.53□□□□□ -1.04
VPS33B-201ENST00000333371 ACYP1P07311 99 aa8.53□□□□□ -1.04
VPS33B-201ENST00000333371 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
VPS33B-201ENST00000333371 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
VPS33B-201ENST00000333371 TRRAPQ9Y4A5 3859 aa8.52□□□□□ -1.04
VPS33B-201ENST00000333371 IGLV10-54A0A075B6I4 117 aa8.52□□□□□ -1.05
VPS33B-201ENST00000333371 NCR3O14931 201 aa8.52□□□□□ -1.05
VPS33B-201ENST00000333371 LINC00643Q86TS7 51 aa8.52□□□□□ -1.05
VPS33B-201ENST00000333371 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
VPS33B-201ENST00000333371 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
VPS33B-201ENST00000333371 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
VPS33B-201ENST00000333371 SDIM1Q6ZPB5 146 aa8.5□□□□□ -1.05
VPS33B-201ENST00000333371 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
VPS33B-201ENST00000333371 X6R8D5 127 aa8.49□□□□□ -1.05
VPS33B-201ENST00000333371 ATRQ13535 2644 aa8.49□□□□□ -1.05
VPS33B-201ENST00000333371 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
VPS33B-201ENST00000333371 SS18Q15532 418 aa8.48□□□□□ -1.05
VPS33B-201ENST00000333371 HIVEP1P15822 2718 aa8.48□□□□□ -1.05
VPS33B-201ENST00000333371 IGKV3D-7A0A0C4DH55 119 aa8.47□□□□□ -1.05
VPS33B-201ENST00000333371 KIR2DL5BQ8NHK3 375 aa8.47□□□□□ -1.05
VPS33B-201ENST00000333371 H0YGX0 51 aa8.47□□□□□ -1.05
VPS33B-201ENST00000333371 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
VPS33B-201ENST00000333371 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.05
VPS33B-201ENST00000333371 IMUPQ9GZP8 106 aa8.46□□□□□ -1.05
VPS33B-201ENST00000333371 DEFB135Q30KP9 77 aa8.46□□□□□ -1.06
VPS33B-201ENST00000333371 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
VPS33B-201ENST00000333371 Q8NDZ9 215 aa8.46□□□□□ -1.06
VPS33B-201ENST00000333371 LINC00526Q96FQ7 95 aa8.46□□□□□ -1.06
VPS33B-201ENST00000333371 PRO0255Q9UI72 69 aa8.45□□□□□ -1.06
VPS33B-201ENST00000333371 Q8IZM0 81 aa8.45□□□□□ -1.06
VPS33B-201ENST00000333371 A0A1B0GUV1 79 aa8.44□□□□□ -1.06
VPS33B-201ENST00000333371 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
VPS33B-201ENST00000333371 PKD1L1Q8TDX9 2849 aa8.44□□□□□ -1.06
VPS33B-201ENST00000333371 ANGP03950 147 aaKnown RBP8.44□□□□□ -1.06
VPS33B-201ENST00000333371 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
VPS33B-201ENST00000333371 A0A087WVE0 104 aa8.44□□□□□ -1.06
VPS33B-201ENST00000333371 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
VPS33B-201ENST00000333371 OBSCN-AS1Q96MR7 158 aa8.43□□□□□ -1.06
VPS33B-201ENST00000333371 CXCL5P42830 114 aa8.43□□□□□ -1.06
VPS33B-201ENST00000333371 C6orf223Q8N319 242 aa8.42□□□□□ -1.06
VPS33B-201ENST00000333371 ORMDL1Q9P0S3 153 aa8.42□□□□□ -1.06
VPS33B-201ENST00000333371 TEP1Q99973 2627 aaKnown RBP8.42□□□□□ -1.06
VPS33B-201ENST00000333371 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 CELA1Q9UNI1 258 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 HTN3P15516 51 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 REG3AQ06141 175 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
VPS33B-201ENST00000333371 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
VPS33B-201ENST00000333371 APOC4P55056 127 aa8.4□□□□□ -1.06
VPS33B-201ENST00000333371 C3orf22Q8N5N4 141 aa8.4□□□□□ -1.06
VPS33B-201ENST00000333371 F8P00451 2351 aa8.39□□□□□ -1.07
VPS33B-201ENST00000333371 Q8N814 137 aa8.39□□□□□ -1.07
VPS33B-201ENST00000333371 IGHV4-28A0A0C4DH34 117 aa8.39□□□□□ -1.07
VPS33B-201ENST00000333371 C6orf99Q4VX62 202 aa8.39□□□□□ -1.07
VPS33B-201ENST00000333371 UNQ6190/PRO20217Q6UXQ8 127 aa8.39□□□□□ -1.07
VPS33B-201ENST00000333371 WFDC9Q8NEX5 89 aa8.38□□□□□ -1.07
VPS33B-201ENST00000333371 C2orf48Q96LS8 159 aa8.38□□□□□ -1.07
VPS33B-201ENST00000333371 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
VPS33B-201ENST00000333371 DAD1P61803 113 aa8.37□□□□□ -1.07
VPS33B-201ENST00000333371 UQCRQO14949 82 aa8.37□□□□□ -1.07
VPS33B-201ENST00000333371 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
VPS33B-201ENST00000333371 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
VPS33B-201ENST00000333371 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
VPS33B-201ENST00000333371 TMEM126AQ9H061 195 aa8.36□□□□□ -1.07
VPS33B-201ENST00000333371 LYRM9A8MSI8 78 aa8.35□□□□□ -1.07
VPS33B-201ENST00000333371 Q6JHZ5 121 aa8.35□□□□□ -1.07
VPS33B-201ENST00000333371 CCKP06307 115 aa8.35□□□□□ -1.07
VPS33B-201ENST00000333371 COX7CP15954 63 aa8.35□□□□□ -1.07
VPS33B-201ENST00000333371 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms