RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 IGHV4-30-4P0DP06 118 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 COPS9Q8WXC6 57 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 CELA1Q9UNI1 258 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
DDX28-201ENST00000332395 TOMM7Q9P0U1 55 aa12.07□□□□□ -0.48
DDX28-201ENST00000332395 A0A087WZ39 114 aa12.06□□□□□ -0.48
DDX28-201ENST00000332395 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
DDX28-201ENST00000332395 ATP5G1P05496 136 aa12.05□□□□□ -0.48
DDX28-201ENST00000332395 COX6CP09669 75 aa12.05□□□□□ -0.48
DDX28-201ENST00000332395 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
DDX28-201ENST00000332395 DEFB121Q5J5C9 76 aa12.03□□□□□ -0.48
DDX28-201ENST00000332395 F8P00451 2351 aa12.03□□□□□ -0.48
DDX28-201ENST00000332395 FAM240AA0A1B0GVK7 77 aa12.02□□□□□ -0.48
DDX28-201ENST00000332395 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.48
DDX28-201ENST00000332395 SS18Q15532 418 aa12.02□□□□□ -0.48
DDX28-201ENST00000332395 LST1O00453 97 aa12.02□□□□□ -0.49
DDX28-201ENST00000332395 XCL1P47992 114 aa12.02□□□□□ -0.49
DDX28-201ENST00000332395 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
DDX28-201ENST00000332395 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
DDX28-201ENST00000332395 PPDPFQ9H3Y8 114 aa12.01□□□□□ -0.49
DDX28-201ENST00000332395 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
DDX28-201ENST00000332395 MIR7-3HGQ8N6C7 128 aa11.99□□□□□ -0.49
DDX28-201ENST00000332395 HTN3P15516 51 aa11.99□□□□□ -0.49
DDX28-201ENST00000332395 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
DDX28-201ENST00000332395 KRTAP24-1Q3LI83 254 aa11.97□□□□□ -0.49
DDX28-201ENST00000332395 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.49
DDX28-201ENST00000332395 LINC00158P58513 81 aa11.96□□□□□ -0.49
DDX28-201ENST00000332395 Q8N3U1 123 aa11.96□□□□□ -0.49
DDX28-201ENST00000332395 TRBV7-7A0A0K0K1E9 115 aa11.96□□□□□ -0.5
DDX28-201ENST00000332395 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.5
DDX28-201ENST00000332395 KRTAP10-11P60412 298 aa11.95□□□□□ -0.5
DDX28-201ENST00000332395 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
DDX28-201ENST00000332395 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
DDX28-201ENST00000332395 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
DDX28-201ENST00000332395 LINC01561Q8N1V8 128 aa11.94□□□□□ -0.5
DDX28-201ENST00000332395 REG3AQ06141 175 aa11.94□□□□□ -0.5
DDX28-201ENST00000332395 Q8IZM0 81 aa11.94□□□□□ -0.5
DDX28-201ENST00000332395 FLNBO75369 2602 aaKnown RBP11.93□□□□□ -0.5
DDX28-201ENST00000332395 PFN2P35080 140 aa11.93□□□□□ -0.5
DDX28-201ENST00000332395 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
DDX28-201ENST00000332395 SND1-IT1Q9HBX3 110 aa11.93□□□□□ -0.5
DDX28-201ENST00000332395 CHCHD10Q8WYQ3 142 aaPredicted RBP11.92□□□□□ -0.5
DDX28-201ENST00000332395 COX7A2LO14548 114 aa11.92□□□□□ -0.5
DDX28-201ENST00000332395 LELP1Q5T871 98 aa11.92□□□□□ -0.5
DDX28-201ENST00000332395 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 CCL18P55774 89 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 SMIM20Q8N5G0 67 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 CRPP02741 224 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 RETNQ9HD89 108 aa11.91□□□□□ -0.5
DDX28-201ENST00000332395 IGKV2-28A0A075B6P5 120 aa11.9□□□□□ -0.5
DDX28-201ENST00000332395 IGKV2D-28P01615 120 aa11.9□□□□□ -0.5
DDX28-201ENST00000332395 ACYP1P07311 99 aa11.9□□□□□ -0.5
DDX28-201ENST00000332395 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
DDX28-201ENST00000332395 EGFEM1PQ0D2K5 195 aa11.89□□□□□ -0.51
DDX28-201ENST00000332395 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
DDX28-201ENST00000332395 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
DDX28-201ENST00000332395 FBN1P35555 2871 aaKnown RBP11.88□□□□□ -0.51
DDX28-201ENST00000332395 KIAA0087Q14695 138 aa11.87□□□□□ -0.51
DDX28-201ENST00000332395 MALP21145 153 aa11.86□□□□□ -0.51
DDX28-201ENST00000332395 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
DDX28-201ENST00000332395 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
DDX28-201ENST00000332395 TMEM126AQ9H061 195 aa11.85□□□□□ -0.51
DDX28-201ENST00000332395 ANK2Q01484 3957 aa11.85□□□□□ -0.51
DDX28-201ENST00000332395 CXCL5P42830 114 aa11.84□□□□□ -0.51
DDX28-201ENST00000332395 LYPD5Q6UWN5 251 aa11.84□□□□□ -0.51
DDX28-201ENST00000332395 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
DDX28-201ENST00000332395 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
DDX28-201ENST00000332395 STAB1Q9NY15 2570 aa11.83□□□□□ -0.52
DDX28-201ENST00000332395 SMCR5Q8TEV8 140 aa11.83□□□□□ -0.52
DDX28-201ENST00000332395 PRR34Q9NV39 138 aa11.83□□□□□ -0.52
DDX28-201ENST00000332395 KLK12Q9UKR0 248 aa11.83□□□□□ -0.52
DDX28-201ENST00000332395 PKD1L1Q8TDX9 2849 aa11.83□□□□□ -0.52
DDX28-201ENST00000332395 LINC00643Q86TS7 51 aa11.82□□□□□ -0.52
DDX28-201ENST00000332395 TRACP01848 142 aa11.82□□□□□ -0.52
DDX28-201ENST00000332395 SDIM1Q6ZPB5 146 aa11.81□□□□□ -0.52
DDX28-201ENST00000332395 Q6ZTC4 211 aa11.81□□□□□ -0.52
DDX28-201ENST00000332395 SMIM11BQ8TCY0 68 aa11.81□□□□□ -0.52
DDX28-201ENST00000332395 FAM218AQ96MZ4 157 aa11.81□□□□□ -0.52
DDX28-201ENST00000332395 H3BNG1 76 aa11.81□□□□□ -0.52
DDX28-201ENST00000332395 KPRPQ5T749 579 aaPredicted RBP11.81□□□□□ -0.52
DDX28-201ENST00000332395 COX17Q14061 63 aa11.8□□□□□ -0.52
DDX28-201ENST00000332395 ENHOQ6UWT2 76 aa11.79□□□□□ -0.52
DDX28-201ENST00000332395 KLK5Q9Y337 293 aaPredicted RBP11.79□□□□□ -0.52
DDX28-201ENST00000332395 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
DDX28-201ENST00000332395 OR13C6PQ8NH95 151 aa11.78□□□□□ -0.52
DDX28-201ENST00000332395 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
DDX28-201ENST00000332395 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
DDX28-201ENST00000332395 SPAG11BQ08648 103 aa11.77□□□□□ -0.53
DDX28-201ENST00000332395 C3orf22Q8N5N4 141 aa11.77□□□□□ -0.53
DDX28-201ENST00000332395 DNAH3Q8TD57 4116 aa11.76□□□□□ -0.53
DDX28-201ENST00000332395 A0A0J9YWU9 116 aa11.76□□□□□ -0.53
DDX28-201ENST00000332395 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
DDX28-201ENST00000332395 MAST4O15021 2626 aa11.75□□□□□ -0.53
DDX28-201ENST00000332395 C6orf223Q8N319 242 aa11.75□□□□□ -0.53
DDX28-201ENST00000332395 H0YGX0 51 aa11.74□□□□□ -0.53
DDX28-201ENST00000332395 UQCRQO14949 82 aa11.74□□□□□ -0.53
DDX28-201ENST00000332395 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
DDX28-201ENST00000332395 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
DDX28-201ENST00000332395 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms