RNA–Protein interactions for RNA: ENST00000330398.8

ATP6V0C-201, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0C, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-201ENST00000330398 LINC00474Q9P2X8 69 aa11.59□□□□□ -0.55
ATP6V0C-201ENST00000330398 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
ATP6V0C-201ENST00000330398 H3BRM9 83 aa11.58□□□□□ -0.56
ATP6V0C-201ENST00000330398 NDUFA1O15239 70 aa11.58□□□□□ -0.56
ATP6V0C-201ENST00000330398 PLAC8Q9NZF1 115 aa11.58□□□□□ -0.56
ATP6V0C-201ENST00000330398 A0A087WYN8 130 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 A0A096LNI7 61 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 LINC00310P59036 64 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 TOMM7Q9P0U1 55 aa11.57□□□□□ -0.56
ATP6V0C-201ENST00000330398 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
ATP6V0C-201ENST00000330398 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
ATP6V0C-201ENST00000330398 NUPR1O60356 82 aa11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 PLA2G1BP04054 148 aaKnown RBP11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 PRSS2P07478 247 aa11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 Q8IZM0 81 aa11.55□□□□□ -0.56
ATP6V0C-201ENST00000330398 TLX1NBP0CAT3 122 aa11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 PTTG1IPP53801 180 aa11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 CHTOPQ9Y3Y2 248 aaKnown RBP11.54□□□□□ -0.56
ATP6V0C-201ENST00000330398 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
ATP6V0C-201ENST00000330398 GAGE2BQ13066 116 aa11.53□□□□□ -0.56
ATP6V0C-201ENST00000330398 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
ATP6V0C-201ENST00000330398 C6orf48Q9UBA6 75 aa11.53□□□□□ -0.56
ATP6V0C-201ENST00000330398 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
ATP6V0C-201ENST00000330398 SPINK8P0C7L1 97 aa11.52□□□□□ -0.57
ATP6V0C-201ENST00000330398 KRTAP10-4P60372 401 aaPredicted RBP11.52□□□□□ -0.57
ATP6V0C-201ENST00000330398 S100A6P06703 90 aa11.51□□□□□ -0.57
ATP6V0C-201ENST00000330398 CKS1BP61024 79 aa11.51□□□□□ -0.57
ATP6V0C-201ENST00000330398 RPL18AQ02543 176 aaKnown RBP11.51□□□□□ -0.57
ATP6V0C-201ENST00000330398 STPG4Q8N801 248 aa11.51□□□□□ -0.57
ATP6V0C-201ENST00000330398 F8VRH5 84 aa11.5□□□□□ -0.57
ATP6V0C-201ENST00000330398 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
ATP6V0C-201ENST00000330398 FABP4P15090 132 aa11.5□□□□□ -0.57
ATP6V0C-201ENST00000330398 ZNF22P17026 224 aaPredicted RBP11.5□□□□□ -0.57
ATP6V0C-201ENST00000330398 CXCL5P42830 114 aa11.49□□□□□ -0.57
ATP6V0C-201ENST00000330398 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
ATP6V0C-201ENST00000330398 AKR1D1P51857 326 aa11.48□□□□□ -0.57
ATP6V0C-201ENST00000330398 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
ATP6V0C-201ENST00000330398 PLNP26678 52 aa11.47□□□□□ -0.57
ATP6V0C-201ENST00000330398 C9orf116Q5BN46 136 aaPredicted RBP11.47□□□□□ -0.57
ATP6V0C-201ENST00000330398 TMEM170BQ5T4T1 132 aa11.47□□□□□ -0.57
ATP6V0C-201ENST00000330398 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
ATP6V0C-201ENST00000330398 IGLV5-39A0A0G2JS06 123 aa11.46□□□□□ -0.57
ATP6V0C-201ENST00000330398 H0Y8G0 127 aa11.46□□□□□ -0.57
ATP6V0C-201ENST00000330398 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
ATP6V0C-201ENST00000330398 Q6ZRP5 223 aa11.46□□□□□ -0.57
ATP6V0C-201ENST00000330398 FLG2Q5D862 2391 aaPredicted RBP11.45□□□□□ -0.58
ATP6V0C-201ENST00000330398 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
ATP6V0C-201ENST00000330398 S100A2P29034 98 aa11.45□□□□□ -0.58
ATP6V0C-201ENST00000330398 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
ATP6V0C-201ENST00000330398 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
ATP6V0C-201ENST00000330398 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
ATP6V0C-201ENST00000330398 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
ATP6V0C-201ENST00000330398 DPM2O94777 84 aa11.42□□□□□ -0.58
ATP6V0C-201ENST00000330398 ODF1Q14990 250 aa11.42□□□□□ -0.58
ATP6V0C-201ENST00000330398 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
ATP6V0C-201ENST00000330398 C20orf202A1L168 122 aa11.41□□□□□ -0.58
ATP6V0C-201ENST00000330398 HERVK_113P61574 105 aa11.41□□□□□ -0.58
ATP6V0C-201ENST00000330398 SYS1-DBNDD2H3BUS1 97 aa11.4□□□□□ -0.58
ATP6V0C-201ENST00000330398 MYCBP2O75592 4640 aa11.4□□□□□ -0.58
ATP6V0C-201ENST00000330398 IGKCP01834 107 aa11.39□□□□□ -0.59
ATP6V0C-201ENST00000330398 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
ATP6V0C-201ENST00000330398 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
ATP6V0C-201ENST00000330398 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
ATP6V0C-201ENST00000330398 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
ATP6V0C-201ENST00000330398 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
ATP6V0C-201ENST00000330398 C9orf129Q5T035 196 aaKnown RBP11.36□□□□□ -0.59
ATP6V0C-201ENST00000330398 KRTDAPP60985 99 aa11.35□□□□□ -0.59
ATP6V0C-201ENST00000330398 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
ATP6V0C-201ENST00000330398 LINC01545Q5VT33 79 aa11.34□□□□□ -0.59
ATP6V0C-201ENST00000330398 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
ATP6V0C-201ENST00000330398 FAM19A5Q7Z5A7 132 aaPredicted RBP11.34□□□□□ -0.59
ATP6V0C-201ENST00000330398 PLEKHB2Q96CS7 222 aa11.34□□□□□ -0.59
ATP6V0C-201ENST00000330398 XAGE1AQ9HD64 81 aa11.34□□□□□ -0.59
ATP6V0C-201ENST00000330398 C3orf79P0CE67 100 aa11.33□□□□□ -0.6
ATP6V0C-201ENST00000330398 HNRNPA3P51991 378 aaKnown RBP11.33□□□□□ -0.6
ATP6V0C-201ENST00000330398 PRR3P79522 188 aaKnown RBP11.33□□□□□ -0.6
ATP6V0C-201ENST00000330398 HIST3H2BBQ8N257 126 aa11.33□□□□□ -0.6
ATP6V0C-201ENST00000330398 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
ATP6V0C-201ENST00000330398 PFN2P35080 140 aa11.32□□□□□ -0.6
ATP6V0C-201ENST00000330398 COX17Q14061 63 aa11.32□□□□□ -0.6
ATP6V0C-201ENST00000330398 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
ATP6V0C-201ENST00000330398 HERV-K104P63124 156 aa11.31□□□□□ -0.6
ATP6V0C-201ENST00000330398 DMBT1Q9UGM3 2413 aaPredicted RBP11.3□□□□□ -0.6
ATP6V0C-201ENST00000330398 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
ATP6V0C-201ENST00000330398 LEPROTO15243 131 aa11.3□□□□□ -0.6
ATP6V0C-201ENST00000330398 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
ATP6V0C-201ENST00000330398 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
ATP6V0C-201ENST00000330398 NMUP48645 174 aa11.29□□□□□ -0.6
ATP6V0C-201ENST00000330398 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
ATP6V0C-201ENST00000330398 PLA2G2DQ9UNK4 145 aa11.29□□□□□ -0.6
ATP6V0C-201ENST00000330398 LRP1Q07954 4544 aaKnown RBP11.28□□□□□ -0.6
ATP6V0C-201ENST00000330398 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
ATP6V0C-201ENST00000330398 LGALS3P17931 250 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms