RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 HERC1Q15751 4861 aa13.21□□□□□ -0.3
TNFRSF18-201ENST00000328596 LOC107984640A0A0U1RRK4 108 aa13.2□□□□□ -0.3
TNFRSF18-201ENST00000328596 KRTAP29-1A8MX34 341 aaPredicted RBP13.2□□□□□ -0.3
TNFRSF18-201ENST00000328596 NDUFA6P56556 154 aa13.2□□□□□ -0.3
TNFRSF18-201ENST00000328596 J3QL48 77 aa13.19□□□□□ -0.3
TNFRSF18-201ENST00000328596 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
TNFRSF18-201ENST00000328596 F8WDY8 70 aa13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 NUPR1O60356 82 aa13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 IFI27L1Q96BM0 104 aa13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 CDKN2A-AS1Q9UH64 79 aa13.18□□□□□ -0.3
TNFRSF18-201ENST00000328596 GAGE2BQ13066 116 aa13.17□□□□□ -0.3
TNFRSF18-201ENST00000328596 RNF151Q2KHN1 245 aa13.17□□□□□ -0.3
TNFRSF18-201ENST00000328596 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
TNFRSF18-201ENST00000328596 LINC00469Q8N7U9 141 aa13.16□□□□□ -0.3
TNFRSF18-201ENST00000328596 MRPL35Q9NZE8 188 aaKnown RBP13.16□□□□□ -0.3
TNFRSF18-201ENST00000328596 PKHD1L1Q86WI1 4243 aa13.15□□□□□ -0.3
TNFRSF18-201ENST00000328596 NDUFA1O15239 70 aa13.15□□□□□ -0.3
TNFRSF18-201ENST00000328596 LEPROTL1O95214 131 aa13.15□□□□□ -0.3
TNFRSF18-201ENST00000328596 IGLC3P0DOY3 106 aa13.15□□□□□ -0.3
TNFRSF18-201ENST00000328596 TRAV12-1A0A0B4J245 112 aa13.14□□□□□ -0.31
TNFRSF18-201ENST00000328596 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
TNFRSF18-201ENST00000328596 PACRGQ96M98 296 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF18-201ENST00000328596 OXTP01178 125 aa13.13□□□□□ -0.31
TNFRSF18-201ENST00000328596 LRP1Q07954 4544 aaKnown RBP13.13□□□□□ -0.31
TNFRSF18-201ENST00000328596 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
TNFRSF18-201ENST00000328596 HSPB8Q9UJY1 196 aa13.12□□□□□ -0.31
TNFRSF18-201ENST00000328596 H3BRM9 83 aa13.11□□□□□ -0.31
TNFRSF18-201ENST00000328596 C10orf25Q5T742 122 aa13.11□□□□□ -0.31
TNFRSF18-201ENST00000328596 UNQ6190/PRO20217Q6UXQ8 127 aa13.11□□□□□ -0.31
TNFRSF18-201ENST00000328596 CHTOPQ9Y3Y2 248 aaKnown RBP13.11□□□□□ -0.31
TNFRSF18-201ENST00000328596 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
TNFRSF18-201ENST00000328596 PRSS2P07478 247 aa13.1□□□□□ -0.31
TNFRSF18-201ENST00000328596 COA6Q5JTJ3 125 aaKnown RBP13.1□□□□□ -0.31
TNFRSF18-201ENST00000328596 FABP4P15090 132 aa13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 ZNF22P17026 224 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 Q8IZM0 81 aa13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 C6orf48Q9UBA6 75 aa13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 FAT3Q8TDW7 4589 aa13.09□□□□□ -0.31
TNFRSF18-201ENST00000328596 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
TNFRSF18-201ENST00000328596 C11orf86A6NJI1 115 aa13.08□□□□□ -0.32
TNFRSF18-201ENST00000328596 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.32
TNFRSF18-201ENST00000328596 F8VRH5 84 aa13.07□□□□□ -0.32
TNFRSF18-201ENST00000328596 TLX1NBP0CAT3 122 aa13.07□□□□□ -0.32
TNFRSF18-201ENST00000328596 C6orf226Q5I0X4 101 aa13.07□□□□□ -0.32
TNFRSF18-201ENST00000328596 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
TNFRSF18-201ENST00000328596 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF18-201ENST00000328596 TRBV30A0A0K0K1B3 111 aa13.05□□□□□ -0.32
TNFRSF18-201ENST00000328596 CKS1BP61024 79 aa13.05□□□□□ -0.32
TNFRSF18-201ENST00000328596 C2orf82Q6UX34 121 aa13.05□□□□□ -0.32
TNFRSF18-201ENST00000328596 H0Y8G0 127 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 CXCL5P42830 114 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 ODF1Q14990 250 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 Q6ZRP5 223 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
TNFRSF18-201ENST00000328596 MAP1LC3CQ9BXW4 147 aa13.03□□□□□ -0.32
TNFRSF18-201ENST00000328596 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
TNFRSF18-201ENST00000328596 GAGE2EQ4V326 116 aa13□□□□□ -0.33
TNFRSF18-201ENST00000328596 GAGE2DQ9UEU5 116 aa13□□□□□ -0.33
TNFRSF18-201ENST00000328596 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
TNFRSF18-201ENST00000328596 TMEM223A0PJW6 202 aa12.98□□□□□ -0.33
TNFRSF18-201ENST00000328596 PLNP26678 52 aa12.98□□□□□ -0.33
TNFRSF18-201ENST00000328596 FAM168BA1KXE4 195 aa12.97□□□□□ -0.33
TNFRSF18-201ENST00000328596 PHF5AQ7RTV0 110 aaKnown RBP12.97□□□□□ -0.33
TNFRSF18-201ENST00000328596 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.33
TNFRSF18-201ENST00000328596 DPM2O94777 84 aa12.96□□□□□ -0.33
TNFRSF18-201ENST00000328596 SPINK6Q6UWN8 80 aa12.94□□□□□ -0.34
TNFRSF18-201ENST00000328596 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF18-201ENST00000328596 PSORS1C2Q9UIG4 136 aa12.94□□□□□ -0.34
TNFRSF18-201ENST00000328596 IGKCP01834 107 aa12.93□□□□□ -0.34
TNFRSF18-201ENST00000328596 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
TNFRSF18-201ENST00000328596 PMCHL2Q9BQD1 86 aa12.93□□□□□ -0.34
TNFRSF18-201ENST00000328596 MT1HL1P0DM35 61 aa12.92□□□□□ -0.34
TNFRSF18-201ENST00000328596 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
TNFRSF18-201ENST00000328596 C9orf129Q5T035 196 aaKnown RBP12.92□□□□□ -0.34
TNFRSF18-201ENST00000328596 SFTA2Q6UW10 78 aa12.92□□□□□ -0.34
TNFRSF18-201ENST00000328596 S100A6P06703 90 aa12.91□□□□□ -0.34
TNFRSF18-201ENST00000328596 C3orf79P0CE67 100 aa12.91□□□□□ -0.34
TNFRSF18-201ENST00000328596 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
TNFRSF18-201ENST00000328596 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
TNFRSF18-201ENST00000328596 SERTAD4-AS1Q5TG53 156 aa12.89□□□□□ -0.35
TNFRSF18-201ENST00000328596 HIST3H2BBQ8N257 126 aa12.89□□□□□ -0.35
TNFRSF18-201ENST00000328596 M0QXV9 152 aa12.88□□□□□ -0.35
TNFRSF18-201ENST00000328596 KRTDAPP60985 99 aa12.88□□□□□ -0.35
TNFRSF18-201ENST00000328596 HERVK_113P61574 105 aa12.88□□□□□ -0.35
TNFRSF18-201ENST00000328596 C1orf137Q5JT78 98 aa12.88□□□□□ -0.35
TNFRSF18-201ENST00000328596 ZNF625Q96I27 306 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF18-201ENST00000328596 LINC01600Q96MT4 127 aa12.87□□□□□ -0.35
TNFRSF18-201ENST00000328596 S100A2P29034 98 aa12.86□□□□□ -0.35
TNFRSF18-201ENST00000328596 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
TNFRSF18-201ENST00000328596 KRTAP11-1Q8IUC1 163 aa12.86□□□□□ -0.35
TNFRSF18-201ENST00000328596 LEPROTO15243 131 aa12.85□□□□□ -0.35
TNFRSF18-201ENST00000328596 PLEKHB2Q96CS7 222 aa12.85□□□□□ -0.35
TNFRSF18-201ENST00000328596 XAGE1AQ9HD64 81 aa12.85□□□□□ -0.35
TNFRSF18-201ENST00000328596 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
TNFRSF18-201ENST00000328596 C20orf202A1L168 122 aa12.83□□□□□ -0.36
TNFRSF18-201ENST00000328596 UBE2BP63146 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms