RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
PPP3CA-201ENST00000323055 CSDC2Q9Y534 153 aaKnown RBP12.06□□□□□ -0.48
PPP3CA-201ENST00000323055 KALRNO60229 2985 aa12.06□□□□□ -0.48
PPP3CA-201ENST00000323055 JMJD7-PLA2G4BH0Y9G9 81 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 RNF183Q96D59 192 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 CYSRT1A8MQ03 144 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 TMEM256-PLSCR3K7ERE1 68 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 hADV29S1A0JD25 119 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 TRACP01848 142 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 LOC400499M0QZD8 3231 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 A0A087WZ39 114 aa12.05□□□□□ -0.48
PPP3CA-201ENST00000323055 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
PPP3CA-201ENST00000323055 CDK2AP2O75956 126 aa12.04□□□□□ -0.48
PPP3CA-201ENST00000323055 Q8IZM0 81 aa12.03□□□□□ -0.48
PPP3CA-201ENST00000323055 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
PPP3CA-201ENST00000323055 TEX15Q9BXT5 2789 aa12.02□□□□□ -0.48
PPP3CA-201ENST00000323055 MT-ATP8P03928 68 aa12.02□□□□□ -0.49
PPP3CA-201ENST00000323055 LST1O00453 97 aa12.02□□□□□ -0.49
PPP3CA-201ENST00000323055 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 PRR3P79522 188 aaKnown RBP12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 TACC2O95359 2948 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 UNC79Q9P2D8 2635 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 FAM236AA0A1B0GUQ0 79 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 FAM236BA0A1B0GV22 79 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 HIGD2AQ9BW72 106 aa12.01□□□□□ -0.49
PPP3CA-201ENST00000323055 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
PPP3CA-201ENST00000323055 IGKV2D-28P01615 120 aa12□□□□□ -0.49
PPP3CA-201ENST00000323055 FAM19A5Q7Z5A7 132 aaPredicted RBP11.99□□□□□ -0.49
PPP3CA-201ENST00000323055 UBE2AP49459 152 aa11.99□□□□□ -0.49
PPP3CA-201ENST00000323055 B5MCH6 92 aa11.98□□□□□ -0.49
PPP3CA-201ENST00000323055 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
PPP3CA-201ENST00000323055 NREPQ16612 68 aa11.96□□□□□ -0.49
PPP3CA-201ENST00000323055 LRBAP50851 2863 aa11.96□□□□□ -0.49
PPP3CA-201ENST00000323055 M0R2N4 97 aa11.96□□□□□ -0.49
PPP3CA-201ENST00000323055 Q6ZQY7 126 aa11.96□□□□□ -0.5
PPP3CA-201ENST00000323055 C6orf223Q8N319 242 aa11.96□□□□□ -0.5
PPP3CA-201ENST00000323055 A0A1B0GUV1 79 aa11.95□□□□□ -0.5
PPP3CA-201ENST00000323055 X6R8D5 127 aa11.94□□□□□ -0.5
PPP3CA-201ENST00000323055 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
PPP3CA-201ENST00000323055 USP34Q70CQ2 3546 aa11.94□□□□□ -0.5
PPP3CA-201ENST00000323055 STAB1Q9NY15 2570 aa11.94□□□□□ -0.5
PPP3CA-201ENST00000323055 LYPD5Q6UWN5 251 aa11.93□□□□□ -0.5
PPP3CA-201ENST00000323055 A0A096LNI7 61 aa11.93□□□□□ -0.5
PPP3CA-201ENST00000323055 GCN1Q92616 2671 aaKnown RBP11.93□□□□□ -0.5
PPP3CA-201ENST00000323055 KRTAP24-1Q3LI83 254 aa11.93□□□□□ -0.5
PPP3CA-201ENST00000323055 A0A1B0GX51 115 aa11.92□□□□□ -0.5
PPP3CA-201ENST00000323055 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
PPP3CA-201ENST00000323055 KRTAP1-3Q8IUG1 177 aa11.92□□□□□ -0.5
PPP3CA-201ENST00000323055 CITED1Q99966 193 aa11.92□□□□□ -0.5
PPP3CA-201ENST00000323055 UBR5O95071 2799 aaPredicted RBP11.91□□□□□ -0.5
PPP3CA-201ENST00000323055 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
PPP3CA-201ENST00000323055 COX17Q14061 63 aa11.91□□□□□ -0.5
PPP3CA-201ENST00000323055 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
PPP3CA-201ENST00000323055 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
PPP3CA-201ENST00000323055 C14orf177Q52M58 125 aa11.9□□□□□ -0.5
PPP3CA-201ENST00000323055 PKIGQ9Y2B9 76 aa11.9□□□□□ -0.5
PPP3CA-201ENST00000323055 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
PPP3CA-201ENST00000323055 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.51
PPP3CA-201ENST00000323055 FAM19A1Q7Z5A9 133 aa11.89□□□□□ -0.51
PPP3CA-201ENST00000323055 NOTCH1P46531 2555 aa11.88□□□□□ -0.51
PPP3CA-201ENST00000323055 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
PPP3CA-201ENST00000323055 H3BQ85 93 aa11.88□□□□□ -0.51
PPP3CA-201ENST00000323055 Q8N3U1 123 aa11.87□□□□□ -0.51
PPP3CA-201ENST00000323055 M0R378 163 aa11.87□□□□□ -0.51
PPP3CA-201ENST00000323055 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
PPP3CA-201ENST00000323055 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
PPP3CA-201ENST00000323055 ZNF73O43830 326 aaPredicted RBP11.86□□□□□ -0.51
PPP3CA-201ENST00000323055 SCXQ7RTU7 201 aa11.86□□□□□ -0.51
PPP3CA-201ENST00000323055 TRBV10-3A0A0K0K1G6 114 aa11.85□□□□□ -0.51
PPP3CA-201ENST00000323055 XGP55808 180 aa11.85□□□□□ -0.51
PPP3CA-201ENST00000323055 PDE6GP18545 87 aa11.85□□□□□ -0.51
PPP3CA-201ENST00000323055 RPL28P46779 137 aaKnown RBP11.85□□□□□ -0.51
PPP3CA-201ENST00000323055 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
PPP3CA-201ENST00000323055 EGFEM1PQ0D2K5 195 aa11.84□□□□□ -0.51
PPP3CA-201ENST00000323055 A0A087WYN8 130 aa11.83□□□□□ -0.51
PPP3CA-201ENST00000323055 ATOX1O00244 68 aa11.83□□□□□ -0.52
PPP3CA-201ENST00000323055 A8MTW9 85 aa11.82□□□□□ -0.52
PPP3CA-201ENST00000323055 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
PPP3CA-201ENST00000323055 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
PPP3CA-201ENST00000323055 CCKP06307 115 aa11.81□□□□□ -0.52
PPP3CA-201ENST00000323055 KRTAP1-1Q07627 177 aa11.81□□□□□ -0.52
PPP3CA-201ENST00000323055 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
PPP3CA-201ENST00000323055 IGLV5-45A0A087WSX0 123 aa11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 NDUFV3P56181 108 aaKnown RBP11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 GIG44P09565 113 aaPredicted RBP11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 ESRGQ1W209 222 aa11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 Q8NAQ8 132 aa11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 PPDPFQ9H3Y8 114 aa11.79□□□□□ -0.52
PPP3CA-201ENST00000323055 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 NBEAL2Q6ZNJ1 2754 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 SOSTDC1Q6X4U4 206 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
PPP3CA-201ENST00000323055 UPK3BQ9BT76 320 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms