RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 C2orf82Q6UX34 121 aa13□□□□□ -0.33
CCDC71-201ENST00000321895 Q6ZRN7 208 aaPredicted RBP13□□□□□ -0.33
CCDC71-201ENST00000321895 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
CCDC71-201ENST00000321895 NTN5Q8WTR8 489 aaPredicted RBP12.99□□□□□ -0.33
CCDC71-201ENST00000321895 C6orf223Q8N319 242 aa12.99□□□□□ -0.33
CCDC71-201ENST00000321895 LINC00526Q96FQ7 95 aa12.99□□□□□ -0.33
CCDC71-201ENST00000321895 C2orf48Q96LS8 159 aa12.98□□□□□ -0.33
CCDC71-201ENST00000321895 F8WDY8 70 aa12.97□□□□□ -0.33
CCDC71-201ENST00000321895 TIMM17BO60830 172 aa12.97□□□□□ -0.33
CCDC71-201ENST00000321895 CTAG1AP78358 180 aa12.97□□□□□ -0.33
CCDC71-201ENST00000321895 TMEM238C9JI98 176 aa12.97□□□□□ -0.33
CCDC71-201ENST00000321895 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.34
CCDC71-201ENST00000321895 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.34
CCDC71-201ENST00000321895 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.34
CCDC71-201ENST00000321895 LINC00587B1AMM8 73 aa12.95□□□□□ -0.34
CCDC71-201ENST00000321895 CAMK2N2Q96S95 79 aa12.95□□□□□ -0.34
CCDC71-201ENST00000321895 LITAFQ99732 161 aa12.95□□□□□ -0.34
CCDC71-201ENST00000321895 KMT2AQ03164 3969 aa12.95□□□□□ -0.34
CCDC71-201ENST00000321895 LECT2O14960 151 aa12.94□□□□□ -0.34
CCDC71-201ENST00000321895 UNQ6190/PRO20217Q6UXQ8 127 aa12.94□□□□□ -0.34
CCDC71-201ENST00000321895 HSD52Q0P140 79 aa12.94□□□□□ -0.34
CCDC71-201ENST00000321895 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
CCDC71-201ENST00000321895 TAL2Q16559 108 aa12.93□□□□□ -0.34
CCDC71-201ENST00000321895 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
CCDC71-201ENST00000321895 C10orf25Q5T742 122 aa12.93□□□□□ -0.34
CCDC71-201ENST00000321895 HIST1H4GQ99525 98 aa12.93□□□□□ -0.34
CCDC71-201ENST00000321895 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
CCDC71-201ENST00000321895 SRSF9Q13242 221 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC71-201ENST00000321895 WFDC2Q14508 124 aa12.92□□□□□ -0.34
CCDC71-201ENST00000321895 TRBV30A0A0K0K1B3 111 aa12.92□□□□□ -0.34
CCDC71-201ENST00000321895 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
CCDC71-201ENST00000321895 SPANXDQ9BXN6 97 aa12.92□□□□□ -0.34
CCDC71-201ENST00000321895 SPANXCQ9NY87 97 aa12.92□□□□□ -0.34
CCDC71-201ENST00000321895 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
CCDC71-201ENST00000321895 ADAMTSL4-AS1Q5T5F5 129 aa12.91□□□□□ -0.34
CCDC71-201ENST00000321895 Q6ZVH6 145 aa12.91□□□□□ -0.34
CCDC71-201ENST00000321895 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
CCDC71-201ENST00000321895 COX17Q14061 63 aa12.9□□□□□ -0.34
CCDC71-201ENST00000321895 LCE6AA0A183 80 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 Q6ZRU5 148 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 PFN2P35080 140 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 LINC00158P58513 81 aa12.89□□□□□ -0.35
CCDC71-201ENST00000321895 C9orf116Q5BN46 136 aaPredicted RBP12.88□□□□□ -0.35
CCDC71-201ENST00000321895 M0R143 59 aa12.87□□□□□ -0.35
CCDC71-201ENST00000321895 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
CCDC71-201ENST00000321895 DNAH10Q8IVF4 4471 aa12.87□□□□□ -0.35
CCDC71-201ENST00000321895 SLPIP03973 132 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 CEND1Q8N111 149 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 DAND5Q8N907 189 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 GCSHP23434 173 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 HINT1P49773 126 aaPredicted RBP12.86□□□□□ -0.35
CCDC71-201ENST00000321895 RNF151Q2KHN1 245 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 MIR7-3HGQ8N6C7 128 aa12.86□□□□□ -0.35
CCDC71-201ENST00000321895 IFITM1P13164 125 aa12.85□□□□□ -0.35
CCDC71-201ENST00000321895 BVES-AS1Q5T3Y7 98 aa12.85□□□□□ -0.35
CCDC71-201ENST00000321895 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
CCDC71-201ENST00000321895 CNBPP62633 177 aaKnown RBP12.84□□□□□ -0.35
CCDC71-201ENST00000321895 A0A087WTM6 91 aa12.84□□□□□ -0.35
CCDC71-201ENST00000321895 COPS9Q8WXC6 57 aa12.84□□□□□ -0.35
CCDC71-201ENST00000321895 MUSTN1Q8IVN3 82 aa12.83□□□□□ -0.36
CCDC71-201ENST00000321895 LINC00308Q8TCZ7 52 aa12.82□□□□□ -0.36
CCDC71-201ENST00000321895 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
CCDC71-201ENST00000321895 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.81□□□□□ -0.36
CCDC71-201ENST00000321895 FXYD2P54710 66 aa12.81□□□□□ -0.36
CCDC71-201ENST00000321895 NPC2P61916 151 aa12.81□□□□□ -0.36
CCDC71-201ENST00000321895 RPL24P83731 157 aaKnown RBP12.81□□□□□ -0.36
CCDC71-201ENST00000321895 Q8N814 137 aa12.81□□□□□ -0.36
CCDC71-201ENST00000321895 SNHG12Q9BXW3 62 aa12.81□□□□□ -0.36
CCDC71-201ENST00000321895 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
CCDC71-201ENST00000321895 BATFQ16520 125 aa12.8□□□□□ -0.36
CCDC71-201ENST00000321895 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.79□□□□□ -0.36
CCDC71-201ENST00000321895 TMEM238LA0A1B0GVL6 79 aa12.79□□□□□ -0.36
CCDC71-201ENST00000321895 A6NJY4 79 aa12.79□□□□□ -0.36
CCDC71-201ENST00000321895 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
CCDC71-201ENST00000321895 RTL8CO15255 209 aa12.79□□□□□ -0.36
CCDC71-201ENST00000321895 EIF4EBP3O60516 100 aaPredicted RBP12.79□□□□□ -0.36
CCDC71-201ENST00000321895 EREGO14944 169 aa12.78□□□□□ -0.36
CCDC71-201ENST00000321895 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
CCDC71-201ENST00000321895 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
CCDC71-201ENST00000321895 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.36
CCDC71-201ENST00000321895 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.36
CCDC71-201ENST00000321895 HYDINQ4G0P3 5121 aa12.76□□□□□ -0.37
CCDC71-201ENST00000321895 A4D1N5 150 aa12.76□□□□□ -0.37
CCDC71-201ENST00000321895 DNAH2Q9P225 4427 aa12.75□□□□□ -0.37
CCDC71-201ENST00000321895 A6NDN8 102 aa12.75□□□□□ -0.37
CCDC71-201ENST00000321895 TNP2Q05952 138 aa12.74□□□□□ -0.37
CCDC71-201ENST00000321895 Q6ZRP5 223 aa12.74□□□□□ -0.37
CCDC71-201ENST00000321895 LOC107984640A0A0U1RRK4 108 aa12.74□□□□□ -0.37
CCDC71-201ENST00000321895 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
CCDC71-201ENST00000321895 NHP2Q9NX24 153 aaKnown RBP12.73□□□□□ -0.37
CCDC71-201ENST00000321895 SACSQ9NZJ4 4579 aa12.73□□□□□ -0.37
CCDC71-201ENST00000321895 FRAS1Q86XX4 4008 aa12.72□□□□□ -0.37
CCDC71-201ENST00000321895 C9orf163Q8N9P6 203 aa12.72□□□□□ -0.37
CCDC71-201ENST00000321895 A0A1B0GWB2 263 aa12.71□□□□□ -0.38
CCDC71-201ENST00000321895 GAGE2EQ4V326 116 aa12.71□□□□□ -0.38
CCDC71-201ENST00000321895 XAGE1AQ9HD64 81 aa12.71□□□□□ -0.38
CCDC71-201ENST00000321895 GAGE2DQ9UEU5 116 aa12.71□□□□□ -0.38
CCDC71-201ENST00000321895 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms