RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TRAV4A0A0B4J268 109 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 TRBV10-1A0A0K0K1A3 114 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 FAM240AA0A1B0GVK7 77 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 Q5W150 140 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 LINC00167Q96N53 147 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 NOP10Q9NPE3 64 aaKnown RBP2.45□□□□□ -2.02
SMCO3-201ENST00000316048 HIVEP2P31629 2446 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 FLNAP21333 2647 aaKnown RBP2.45□□□□□ -2.02
SMCO3-201ENST00000316048 MXRA5Q9NR99 2828 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 ZANQ9Y493 2812 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 TRBV7-3A0A075B6L6 115 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 TRAV8-4A0A0B4J246 113 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 BPY2O14599 106 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 P0DMU3 169 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 FAM231AP0DMU4 169 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 FAM231CP0DMU5 169 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 RPL39P62891 51 aaKnown RBP2.45□□□□□ -2.02
SMCO3-201ENST00000316048 LINC00483Q53H64 154 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 Q6ZTI0 123 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 WFDC9Q8NEX5 89 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 DEFB104AQ8WTQ1 72 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 WFDC10AQ9H1F0 79 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 SPANXA1Q9NS26 97 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 HIGD1BQ9P298 99 aa2.45□□□□□ -2.02
SMCO3-201ENST00000316048 HELZ2Q9BYK8 2649 aaKnown RBP2.44□□□□□ -2.02
SMCO3-201ENST00000316048 TRAV8-6A0A0B4J262 113 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 TRGV4A0A0C4DH28 118 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 TRBV6-4A0A1B0GX49 114 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 FGF6P10767 208 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 SEC11AP67812 179 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 HSD52Q0P140 79 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 BVES-AS1Q5T3Y7 98 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 ZFAND6Q6FIF0 208 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 DAZ4Q86SG3 579 aaKnown RBP2.44□□□□□ -2.02
SMCO3-201ENST00000316048 TMEM126AQ9H061 195 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 CCDC168Q8NDH2 2452 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 IGKV2D-26A0A0A0MRZ7 120 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 PSPHP1O15172 72 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
SMCO3-201ENST00000316048 TMEM170BQ5T4T1 132 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 C2orf91Q6ZV80 131 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 C3orf56Q8N813 242 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 SLC25A29Q8N8R3 303 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 PRADC1Q9BSG0 188 aa2.44□□□□□ -2.02
SMCO3-201ENST00000316048 NBPF19A0A087WUL8 3843 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 SONP18583 2426 aaKnown RBP2.43□□□□□ -2.02
SMCO3-201ENST00000316048 SORL1Q92673 2214 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 TRBV25-1A0A075B6N4 114 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 MYMXA0A1B0GTQ4 84 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 EMP1P54849 157 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 CARD19Q96LW7 228 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 AMELXQ99217 191 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 CHCHD7Q9BUK0 85 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 GTSF1LQ9H1H1 148 aa2.43□□□□□ -2.02
SMCO3-201ENST00000316048 ZNF469Q96JG9 3925 aaPredicted RBP2.43□□□□□ -2.02
SMCO3-201ENST00000316048 A0A1B0GX51 115 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 UBE2L6O14933 153 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 SMIM13P0DJ93 91 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 DEFB130BP0DP73 79 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 DEFB130AP0DP74 79 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 UBE2D3P61077 147 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 UBE2D2P62837 147 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 PMAIP1Q13794 54 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 SCGB1D4Q6XE38 83 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 NAA38Q9BRA0 125 aaKnown RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 TP73-AS1Q9UF72 201 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 UBE2D4Q9Y2X8 147 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 FASNP49327 2511 aaKnown RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 ACANP16112 2415 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 ITPR2Q14571 2701 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 TLN2Q9Y4G6 2542 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 GCN1Q92616 2671 aaKnown RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 LOC107984640A0A0U1RRK4 108 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 IGKV2-29A2NJV5 120 aaPredicted RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 ZNF815PA8K554 130 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 H3BRM9 83 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 J3KT08 172 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 LGALS3P17931 250 aaKnown RBP2.42□□□□□ -2.02
SMCO3-201ENST00000316048 AMMECR1LQ6DCA0 310 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 HRCT1Q6UXD1 115 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 PLEKHB2Q96CS7 222 aa2.42□□□□□ -2.02
SMCO3-201ENST00000316048 C9JAW5 83 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 C8orf87E5RJ46 101 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 J3QQQ9 107 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 LEPROTO15243 131 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 MIFP14174 115 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 OR5A1Q8NGJ0 315 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 TTTY13Q9BZ97 58 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 MYO9AB2RTY4 2548 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 WNK1Q9H4A3 2382 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 NDUFS5O43920 106 aa2.41□□□□□ -2.02
SMCO3-201ENST00000316048 SPART-AS1P0CW21 52 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms