RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 COX7A2LO14548 114 aa14.47□□□□□ -0.09
ATG4D-201ENST00000309469 LINC00308Q8TCZ7 52 aa14.47□□□□□ -0.09
ATG4D-201ENST00000309469 PRR34Q9NV39 138 aa14.47□□□□□ -0.09
ATG4D-201ENST00000309469 NBEAL1Q6ZS30 2694 aa14.47□□□□□ -0.09
ATG4D-201ENST00000309469 ESRGQ1W209 222 aa14.46□□□□□ -0.09
ATG4D-201ENST00000309469 C6orf226Q5I0X4 101 aa14.46□□□□□ -0.09
ATG4D-201ENST00000309469 H7C2G1 150 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 PSMB2P49721 201 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 C21orf62-AS1Q17RA5 79 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 WFDC10BQ8IUB3 73 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 Q8IZM0 81 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 COPS9Q8WXC6 57 aa14.45□□□□□ -0.1
ATG4D-201ENST00000309469 TRAV10A0A0B4J240 114 aa14.44□□□□□ -0.1
ATG4D-201ENST00000309469 FOXI1Q12951 378 aa14.44□□□□□ -0.1
ATG4D-201ENST00000309469 Q1RN00 199 aa14.44□□□□□ -0.1
ATG4D-201ENST00000309469 ENHOQ6UWT2 76 aa14.44□□□□□ -0.1
ATG4D-201ENST00000309469 SCGB1C2P0DMR2 95 aa14.43□□□□□ -0.1
ATG4D-201ENST00000309469 TRBV20-1A0A075B6N2 111 aa14.43□□□□□ -0.1
ATG4D-201ENST00000309469 SOSTDC1Q6X4U4 206 aa14.43□□□□□ -0.1
ATG4D-201ENST00000309469 MALP21145 153 aa14.42□□□□□ -0.1
ATG4D-201ENST00000309469 GAGE12HA6NDE8 117 aa14.41□□□□□ -0.1
ATG4D-201ENST00000309469 TCL1BO95988 128 aa14.41□□□□□ -0.1
ATG4D-201ENST00000309469 IBA57-AS1B1ANH7 110 aa14.41□□□□□ -0.1
ATG4D-201ENST00000309469 PRO0461Q9UI25 63 aa14.41□□□□□ -0.1
ATG4D-201ENST00000309469 WFDC2Q14508 124 aa14.4□□□□□ -0.1
ATG4D-201ENST00000309469 PPDPFQ9H3Y8 114 aa14.4□□□□□ -0.1
ATG4D-201ENST00000309469 CRPP02741 224 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 LINC00158P58513 81 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 KIAA0087Q14695 138 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 MTURNQ8N3F0 131 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 MGAM2Q2M2H8 2515 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 MIR7-3HGQ8N6C7 128 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 UBE2WQ96B02 151 aa14.39□□□□□ -0.11
ATG4D-201ENST00000309469 TRAV8-4A0A0B4J246 113 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 TRBV30A0A0K0K1B3 111 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 C2orf82Q6UX34 121 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 CKS1BP61024 79 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 CFAP161Q6P656 301 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 C15orf53Q8NAA6 179 aa14.37□□□□□ -0.11
ATG4D-201ENST00000309469 PFN2P35080 140 aa14.35□□□□□ -0.11
ATG4D-201ENST00000309469 RPL13AP40429 203 aaKnown RBP14.35□□□□□ -0.11
ATG4D-201ENST00000309469 KLK5Q9Y337 293 aaPredicted RBP14.35□□□□□ -0.11
ATG4D-201ENST00000309469 TRIAP1O43715 76 aa14.35□□□□□ -0.11
ATG4D-201ENST00000309469 CXCL5P42830 114 aa14.35□□□□□ -0.11
ATG4D-201ENST00000309469 HUWE1Q7Z6Z7 4374 aaKnown RBP14.34□□□□□ -0.11
ATG4D-201ENST00000309469 LINC01556Q5JQF7 62 aa14.33□□□□□ -0.11
ATG4D-201ENST00000309469 ETDBQ3ZM63 59 aa14.31□□□□□ -0.12
ATG4D-201ENST00000309469 SMCPP49901 116 aaPredicted RBP14.31□□□□□ -0.12
ATG4D-201ENST00000309469 COX6CP09669 75 aa14.3□□□□□ -0.12
ATG4D-201ENST00000309469 J3QR89 54 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 CCL18P55774 89 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 SPAG11BQ08648 103 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 ATXN8Q156A1 80 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 B9D2Q9BPU9 175 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 SND1-IT1Q9HBX3 110 aa14.29□□□□□ -0.12
ATG4D-201ENST00000309469 KRTAP26-1Q6PEX3 210 aa14.28□□□□□ -0.12
ATG4D-201ENST00000309469 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.12
ATG4D-201ENST00000309469 LINC00588Q9Y4M8 146 aa14.27□□□□□ -0.12
ATG4D-201ENST00000309469 COX17Q14061 63 aa14.27□□□□□ -0.13
ATG4D-201ENST00000309469 C6orf223Q8N319 242 aa14.27□□□□□ -0.13
ATG4D-201ENST00000309469 C9JAW5 83 aa14.24□□□□□ -0.13
ATG4D-201ENST00000309469 LINC00526Q96FQ7 95 aa14.24□□□□□ -0.13
ATG4D-201ENST00000309469 TRAV13-2A0A0B4J235 113 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 UNQ6190/PRO20217Q6UXQ8 127 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 IGKV2-28A0A075B6P5 120 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 IGKV2D-28P01615 120 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 LINC01620Q4KN68 170 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 C9orf116Q5BN46 136 aaPredicted RBP14.23□□□□□ -0.13
ATG4D-201ENST00000309469 C10orf25Q5T742 122 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 C1orf43Q9BWL3 253 aa14.23□□□□□ -0.13
ATG4D-201ENST00000309469 SLC25A20O43772 301 aa14.22□□□□□ -0.13
ATG4D-201ENST00000309469 NTN5Q8WTR8 489 aaPredicted RBP14.21□□□□□ -0.14
ATG4D-201ENST00000309469 CLEC2BQ92478 149 aa14.21□□□□□ -0.14
ATG4D-201ENST00000309469 LINC00337Q8N6G1 96 aa14.2□□□□□ -0.14
ATG4D-201ENST00000309469 SCGB1A1P11684 91 aa14.19□□□□□ -0.14
ATG4D-201ENST00000309469 IGKV2D-24A0A075B6R9 120 aa14.19□□□□□ -0.14
ATG4D-201ENST00000309469 M0QXV9 152 aa14.19□□□□□ -0.14
ATG4D-201ENST00000309469 TEN1Q86WV5 123 aa14.19□□□□□ -0.14
ATG4D-201ENST00000309469 LST1O00453 97 aa14.18□□□□□ -0.14
ATG4D-201ENST00000309469 GVQW2A0A096LPI5 108 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-201ENST00000309469 ZNF561-AS1K7EIQ3 104 aa14.17□□□□□ -0.14
ATG4D-201ENST00000309469 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
ATG4D-201ENST00000309469 HIGD2BQ4VC39 106 aa14.16□□□□□ -0.14
ATG4D-201ENST00000309469 UPK3BQ9BT76 320 aa14.16□□□□□ -0.14
ATG4D-201ENST00000309469 TRBV10-2A0A0K0K1G8 114 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 ANKRD29Q8N6D5 301 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 C15orf56Q8N910 161 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 MUC7Q8TAX7 377 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 Q9HAA7 133 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 SIGMAR1Q99720 223 aa14.15□□□□□ -0.14
ATG4D-201ENST00000309469 C6orf48Q9UBA6 75 aa14.14□□□□□ -0.15
ATG4D-201ENST00000309469 NHLRC4P0CG21 123 aaPredicted RBP14.13□□□□□ -0.15
ATG4D-201ENST00000309469 PPDPFLQ8WWR9 84 aa14.13□□□□□ -0.15
ATG4D-201ENST00000309469 NDUFC2O95298 119 aa14.13□□□□□ -0.15
ATG4D-201ENST00000309469 RPL28P46779 137 aaKnown RBP14.13□□□□□ -0.15
ATG4D-201ENST00000309469 LINC01600Q96MT4 127 aa14.13□□□□□ -0.15
ATG4D-201ENST00000309469 CAMK2N2Q96S95 79 aa14.12□□□□□ -0.15
ATG4D-201ENST00000309469 COL7A1Q02388 2944 aa14.12□□□□□ -0.15
ATG4D-201ENST00000309469 C2orf48Q96LS8 159 aa14.11□□□□□ -0.15
ATG4D-201ENST00000309469 CARD19Q96LW7 228 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms