RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 C9orf116Q5BN46 136 aaPredicted RBP3.42□□□□□ -1.86
CAST-201ENST00000309190 TMEM243Q9BU79 118 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 GAGE2EQ4V326 116 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 NTM-AS1Q6ZSK4 140 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 ODF3Q96PU9 254 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 GAGE2DQ9UEU5 116 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 ICOSQ9Y6W8 199 aa3.42□□□□□ -1.86
CAST-201ENST00000309190 I3L3M4 83 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 TCL1BO95988 128 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 ERG28Q9UKR5 140 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 FABP2P12104 132 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 CASC10Q5T4H9 136 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 MT-ATP8P03928 68 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 RAB37Q96AX2 223 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 VPS25Q9BRG1 176 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
CAST-201ENST00000309190 KIR2DL5BQ8NHK3 375 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
CAST-201ENST00000309190 TMEM223A0PJW6 202 aa3.4□□□□□ -1.86
CAST-201ENST00000309190 Q6Q795 121 aa3.4□□□□□ -1.86
CAST-201ENST00000309190 C6orf223Q8N319 242 aa3.4□□□□□ -1.86
CAST-201ENST00000309190 C10orf126Q8N4M7 172 aa3.4□□□□□ -1.86
CAST-201ENST00000309190 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 TRAV4A0A0B4J268 109 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 A0A0B4J2C4 111 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 EGFEM1PQ0D2K5 195 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 ETDBQ3ZM63 59 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 TEN1Q86WV5 123 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 PTH2Q96A98 100 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 B9D2Q9BPU9 175 aa3.4□□□□□ -1.87
CAST-201ENST00000309190 NHP2Q9NX24 153 aaKnown RBP3.4□□□□□ -1.87
CAST-201ENST00000309190 PPP1R17O96001 155 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 SMAGPQ0VAQ4 97 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 TRBV6-8A0A0A6YYG3 113 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 TRAV10A0A0B4J240 114 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 COX6A2Q02221 97 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
CAST-201ENST00000309190 LYPD5Q6UWN5 251 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 LRCOL1A6NCL2 159 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 ZNF22P17026 224 aaPredicted RBP3.39□□□□□ -1.87
CAST-201ENST00000309190 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
CAST-201ENST00000309190 SS18L2Q9UHA2 77 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 LINC00588Q9Y4M8 146 aa3.39□□□□□ -1.87
CAST-201ENST00000309190 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
CAST-201ENST00000309190 REG3AQ06141 175 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 OR13C6PQ8NH95 151 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 APOMO95445 188 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 PRR3P79522 188 aaKnown RBP3.38□□□□□ -1.87
CAST-201ENST00000309190 GAGE2BQ13066 116 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 LINC00158P58513 81 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
CAST-201ENST00000309190 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 C20orf203Q8NBC4 194 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 PYGO1Q9Y3Y4 419 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 TRBV7-7A0A0K0K1E9 115 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 MRPL55Q7Z7F7 128 aaKnown RBP3.37□□□□□ -1.87
CAST-201ENST00000309190 OBSCN-AS1Q96MR7 158 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 TM2D3Q9BRN9 247 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 DYNC2H1Q8NCM8 4307 aaKnown RBP3.37□□□□□ -1.87
CAST-201ENST00000309190 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
CAST-201ENST00000309190 SMIM9A6NGZ8 99 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 CKS1BP61024 79 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 ADAMTSL4-AS1Q5T5F5 129 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 ANKRD29Q8N6D5 301 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
CAST-201ENST00000309190 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
CAST-201ENST00000309190 TMEM141Q96I45 108 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 TRBV10-1A0A0K0K1A3 114 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 LINC01549A6NIU2 74 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 FAM30AQ9NZY2 134 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 IGLV4-3A0A075B6K6 122 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 TRBV20-1A0A075B6N2 111 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
CAST-201ENST00000309190 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 PIK3CD-AS1Q5SR53 167 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 CHCHD7Q9BUK0 85 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
CAST-201ENST00000309190 Q1RN00 199 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 LINC00336Q6ZUF6 198 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 SMCR5Q8TEV8 140 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 IGLV5-39A0A0G2JS06 123 aa3.35□□□□□ -1.87
CAST-201ENST00000309190 LEPROTO15243 131 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms