RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 CKS1BP61024 79 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 PYY3Q5JQD4 70 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 IGLV5-52A0A0A0MRZ9 124 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 NDUFA1O15239 70 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 LEPROTO15243 131 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 CARD19Q96LW7 228 aa17.6■□□□□ 0.41
HDAC3-201ENST00000305264 ANKRD39Q53RE8 183 aa17.59■□□□□ 0.41
HDAC3-201ENST00000305264 IGKV2D-26A0A0A0MRZ7 120 aa17.58■□□□□ 0.4
HDAC3-201ENST00000305264 CXCL5P42830 114 aa17.57■□□□□ 0.4
HDAC3-201ENST00000305264 LINC01620Q4KN68 170 aa17.57■□□□□ 0.4
HDAC3-201ENST00000305264 PLEKHB2Q96CS7 222 aa17.57■□□□□ 0.4
HDAC3-201ENST00000305264 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.57■□□□□ 0.4
HDAC3-201ENST00000305264 J3QQQ9 107 aa17.57■□□□□ 0.4
HDAC3-201ENST00000305264 F8WDY8 70 aa17.56■□□□□ 0.4
HDAC3-201ENST00000305264 PGPEP1Q9NXJ5 209 aa17.56■□□□□ 0.4
HDAC3-201ENST00000305264 C6orf48Q9UBA6 75 aa17.56■□□□□ 0.4
HDAC3-201ENST00000305264 LOC105371267A0A1B0GV96 52 aa17.55■□□□□ 0.4
HDAC3-201ENST00000305264 CDPF1Q6NVV7 123 aa17.54■□□□□ 0.4
HDAC3-201ENST00000305264 ZNF625Q96I27 306 aaPredicted RBP17.54■□□□□ 0.4
HDAC3-201ENST00000305264 C9orf163Q8N9P6 203 aa17.53■□□□□ 0.4
HDAC3-201ENST00000305264 LGALS3P17931 250 aaKnown RBP17.52■□□□□ 0.4
HDAC3-201ENST00000305264 NDUFA12Q9UI09 145 aa17.52■□□□□ 0.4
HDAC3-201ENST00000305264 HSBP1L1C9JCN9 74 aa17.51■□□□□ 0.39
HDAC3-201ENST00000305264 C9orf116Q5BN46 136 aaPredicted RBP17.51■□□□□ 0.39
HDAC3-201ENST00000305264 TRBV30A0A0K0K1B3 111 aa17.5■□□□□ 0.39
HDAC3-201ENST00000305264 NMUP48645 174 aa17.5■□□□□ 0.39
HDAC3-201ENST00000305264 TTTY13Q9BZ97 58 aa17.5■□□□□ 0.39
HDAC3-201ENST00000305264 EPPK1P58107 5090 aaKnown RBP17.48■□□□□ 0.39
HDAC3-201ENST00000305264 RNF151Q2KHN1 245 aa17.48■□□□□ 0.39
HDAC3-201ENST00000305264 SFTA2Q6UW10 78 aa17.46■□□□□ 0.39
HDAC3-201ENST00000305264 DYNC1H1Q14204 4646 aaKnown RBP17.46■□□□□ 0.39
HDAC3-201ENST00000305264 GCSHP23434 173 aa17.46■□□□□ 0.39
HDAC3-201ENST00000305264 VAMP8Q9BV40 100 aa17.46■□□□□ 0.39
HDAC3-201ENST00000305264 PAM16Q9Y3D7 125 aa17.46■□□□□ 0.39
HDAC3-201ENST00000305264 MYMXA0A1B0GTQ4 84 aa17.45■□□□□ 0.38
HDAC3-201ENST00000305264 C16orf90A8MZG2 172 aa17.44■□□□□ 0.38
HDAC3-201ENST00000305264 PCP2Q8IVA1 136 aa17.44■□□□□ 0.38
HDAC3-201ENST00000305264 LRP1BQ9NZR2 4599 aa17.44■□□□□ 0.38
HDAC3-201ENST00000305264 SDIM1Q6ZPB5 146 aa17.43■□□□□ 0.38
HDAC3-201ENST00000305264 KRTAP10-1P60331 282 aa17.42■□□□□ 0.38
HDAC3-201ENST00000305264 ZNF815PA8K554 130 aa17.42■□□□□ 0.38
HDAC3-201ENST00000305264 HERV-K104P63124 156 aa17.41■□□□□ 0.38
HDAC3-201ENST00000305264 SPATA45Q537H7 98 aa17.41■□□□□ 0.38
HDAC3-201ENST00000305264 ERG28Q9UKR5 140 aa17.41■□□□□ 0.38
HDAC3-201ENST00000305264 RPL18AQ02543 176 aaKnown RBP17.4■□□□□ 0.38
HDAC3-201ENST00000305264 LOC107984640A0A0U1RRK4 108 aa17.4■□□□□ 0.38
HDAC3-201ENST00000305264 PFN2P35080 140 aa17.4■□□□□ 0.38
HDAC3-201ENST00000305264 Q6ZRP5 223 aa17.39■□□□□ 0.37
HDAC3-201ENST00000305264 NDUFC2-KCTD14E9PQ53 114 aa17.39■□□□□ 0.37
HDAC3-201ENST00000305264 TLX1NBP0CAT3 122 aa17.39■□□□□ 0.37
HDAC3-201ENST00000305264 A0A096LNI7 61 aa17.38■□□□□ 0.37
HDAC3-201ENST00000305264 DNAH8Q96JB1 4490 aa17.37■□□□□ 0.37
HDAC3-201ENST00000305264 MEIG1Q5JSS6 88 aa17.37■□□□□ 0.37
HDAC3-201ENST00000305264 A0A0J9YXY3 114 aa17.37■□□□□ 0.37
HDAC3-201ENST00000305264 TP73-AS1Q9UF72 201 aa17.37■□□□□ 0.37
HDAC3-201ENST00000305264 A0A0U1RRA0 63 aa17.36■□□□□ 0.37
HDAC3-201ENST00000305264 CHTF8P0CG12 524 aa17.36■□□□□ 0.37
HDAC3-201ENST00000305264 GAGE2BQ13066 116 aa17.36■□□□□ 0.37
HDAC3-201ENST00000305264 IGKV2-24A0A0C4DH68 120 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 SMIM6P0DI80 62 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 SMIM13P0DJ93 91 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 PANO1I0J062 215 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 GAGE2EQ4V326 116 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 GAGE2DQ9UEU5 116 aa17.35■□□□□ 0.37
HDAC3-201ENST00000305264 PTTG1IPP53801 180 aa17.33■□□□□ 0.37
HDAC3-201ENST00000305264 COX17Q14061 63 aa17.33■□□□□ 0.37
HDAC3-201ENST00000305264 PKIGQ9Y2B9 76 aa17.33■□□□□ 0.37
HDAC3-201ENST00000305264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.33■□□□□ 0.37
HDAC3-201ENST00000305264 LINC00158P58513 81 aa17.32■□□□□ 0.36
HDAC3-201ENST00000305264 FAM30AQ9NZY2 134 aa17.32■□□□□ 0.36
HDAC3-201ENST00000305264 COX8AP10176 69 aa17.31■□□□□ 0.36
HDAC3-201ENST00000305264 C14orf144Q96I85 54 aa17.31■□□□□ 0.36
HDAC3-201ENST00000305264 SCGB1D4Q6XE38 83 aa17.29■□□□□ 0.36
HDAC3-201ENST00000305264 XAGE1AQ9HD64 81 aa17.29■□□□□ 0.36
HDAC3-201ENST00000305264 S100A12P80511 92 aa17.29■□□□□ 0.36
HDAC3-201ENST00000305264 BOD1L2Q8IYS8 172 aa17.29■□□□□ 0.36
HDAC3-201ENST00000305264 Q6ZSA8 131 aa17.28■□□□□ 0.36
HDAC3-201ENST00000305264 DAND5Q8N907 189 aa17.28■□□□□ 0.36
HDAC3-201ENST00000305264 LINC00587B1AMM8 73 aa17.28■□□□□ 0.36
HDAC3-201ENST00000305264 SPACA4Q8TDM5 124 aa17.28■□□□□ 0.36
HDAC3-201ENST00000305264 LITAFQ99732 161 aa17.28■□□□□ 0.36
HDAC3-201ENST00000305264 C9orf129Q5T035 196 aaKnown RBP17.27■□□□□ 0.36
HDAC3-201ENST00000305264 MIR7-3HGQ8N6C7 128 aa17.27■□□□□ 0.36
HDAC3-201ENST00000305264 CIRBPQ14011 172 aaKnown RBP17.26■□□□□ 0.35
HDAC3-201ENST00000305264 ADAMTSL4-AS1Q5T5F5 129 aa17.26■□□□□ 0.35
HDAC3-201ENST00000305264 SND1-IT1Q9HBX3 110 aa17.26■□□□□ 0.35
HDAC3-201ENST00000305264 APOBP04114 4563 aaKnown RBP17.24■□□□□ 0.35
HDAC3-201ENST00000305264 LINC00474Q9P2X8 69 aa17.24■□□□□ 0.35
HDAC3-201ENST00000305264 TIMM17BO60830 172 aa17.23■□□□□ 0.35
HDAC3-201ENST00000305264 DLEU1O43261 78 aa17.22■□□□□ 0.35
HDAC3-201ENST00000305264 HAMPP81172 84 aa17.22■□□□□ 0.35
HDAC3-201ENST00000305264 SLC25A34Q6PIV7 304 aa17.22■□□□□ 0.35
HDAC3-201ENST00000305264 FAM168BA1KXE4 195 aa17.2■□□□□ 0.34
HDAC3-201ENST00000305264 C12orf57Q99622 126 aa17.2■□□□□ 0.34
HDAC3-201ENST00000305264 DPH3Q96FX2 82 aa17.19■□□□□ 0.34
HDAC3-201ENST00000305264 TMEM238C9JI98 176 aa17.19■□□□□ 0.34
HDAC3-201ENST00000305264 A0A087WYN8 130 aa17.18■□□□□ 0.34
HDAC3-201ENST00000305264 NPC2P61916 151 aa17.18■□□□□ 0.34
HDAC3-201ENST00000305264 A0A1W2PNN7 141 aa17.17■□□□□ 0.34
HDAC3-201ENST00000305264 SCXQ7RTU7 201 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms