RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 IGKV2-24A0A0C4DH68 120 aa11.54□□□□□ -0.56
TMEM88-201ENST00000301599 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
TMEM88-201ENST00000301599 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
TMEM88-201ENST00000301599 C7orf33Q8WU49 177 aa11.54□□□□□ -0.56
TMEM88-201ENST00000301599 SMIM2Q9BVW6 85 aa11.54□□□□□ -0.56
TMEM88-201ENST00000301599 A0A1B0GV90 55 aa11.53□□□□□ -0.56
TMEM88-201ENST00000301599 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
TMEM88-201ENST00000301599 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
TMEM88-201ENST00000301599 DLEU1O43261 78 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 COX8AP10176 69 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 Q6ZRU5 148 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 LINC00526Q96FQ7 95 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 TIMM21Q9BVV7 248 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 FAT3Q8TDW7 4589 aa11.52□□□□□ -0.57
TMEM88-201ENST00000301599 H0Y8G0 127 aa11.51□□□□□ -0.57
TMEM88-201ENST00000301599 MALP21145 153 aa11.51□□□□□ -0.57
TMEM88-201ENST00000301599 STPG4Q8N801 248 aa11.51□□□□□ -0.57
TMEM88-201ENST00000301599 CARD19Q96LW7 228 aa11.51□□□□□ -0.57
TMEM88-201ENST00000301599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
TMEM88-201ENST00000301599 COX7A2LO14548 114 aa11.5□□□□□ -0.57
TMEM88-201ENST00000301599 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
TMEM88-201ENST00000301599 A0A096LNI7 61 aa11.49□□□□□ -0.57
TMEM88-201ENST00000301599 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
TMEM88-201ENST00000301599 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
TMEM88-201ENST00000301599 PLNP26678 52 aa11.49□□□□□ -0.57
TMEM88-201ENST00000301599 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
TMEM88-201ENST00000301599 DPM2O94777 84 aa11.48□□□□□ -0.57
TMEM88-201ENST00000301599 BATFQ16520 125 aa11.48□□□□□ -0.57
TMEM88-201ENST00000301599 RNASE13Q5GAN3 156 aaKnown RBP11.48□□□□□ -0.57
TMEM88-201ENST00000301599 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
TMEM88-201ENST00000301599 IGKCP01834 107 aa11.47□□□□□ -0.57
TMEM88-201ENST00000301599 TOMM6Q96B49 74 aa11.47□□□□□ -0.57
TMEM88-201ENST00000301599 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.57
TMEM88-201ENST00000301599 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
TMEM88-201ENST00000301599 APOMO95445 188 aa11.45□□□□□ -0.58
TMEM88-201ENST00000301599 ODF1Q14990 250 aa11.45□□□□□ -0.58
TMEM88-201ENST00000301599 Q6ZUT4 128 aa11.45□□□□□ -0.58
TMEM88-201ENST00000301599 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
TMEM88-201ENST00000301599 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
TMEM88-201ENST00000301599 SEC11AP67812 179 aa11.44□□□□□ -0.58
TMEM88-201ENST00000301599 BOD1L2Q8IYS8 172 aa11.44□□□□□ -0.58
TMEM88-201ENST00000301599 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
TMEM88-201ENST00000301599 SCGB3A1Q96QR1 104 aa11.44□□□□□ -0.58
TMEM88-201ENST00000301599 SPANXA1Q9NS26 97 aa11.44□□□□□ -0.58
TMEM88-201ENST00000301599 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 ERASQ7Z444 233 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
TMEM88-201ENST00000301599 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
TMEM88-201ENST00000301599 MRPS36P82909 103 aaKnown RBP11.42□□□□□ -0.58
TMEM88-201ENST00000301599 A6NDN8 102 aa11.41□□□□□ -0.58
TMEM88-201ENST00000301599 F8VRH5 84 aa11.41□□□□□ -0.58
TMEM88-201ENST00000301599 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
TMEM88-201ENST00000301599 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
TMEM88-201ENST00000301599 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
TMEM88-201ENST00000301599 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
TMEM88-201ENST00000301599 MT1HL1P0DM35 61 aa11.4□□□□□ -0.58
TMEM88-201ENST00000301599 HSD52Q0P140 79 aa11.4□□□□□ -0.58
TMEM88-201ENST00000301599 C2orf66Q6UXQ4 117 aa11.4□□□□□ -0.58
TMEM88-201ENST00000301599 OPRPNQ99935 248 aaPredicted RBP11.4□□□□□ -0.58
TMEM88-201ENST00000301599 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
TMEM88-201ENST00000301599 TIMM17AQ99595 171 aa11.39□□□□□ -0.59
TMEM88-201ENST00000301599 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
TMEM88-201ENST00000301599 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
TMEM88-201ENST00000301599 F8WDY8 70 aa11.38□□□□□ -0.59
TMEM88-201ENST00000301599 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
TMEM88-201ENST00000301599 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
TMEM88-201ENST00000301599 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
TMEM88-201ENST00000301599 NPSP0C0P6 89 aa11.37□□□□□ -0.59
TMEM88-201ENST00000301599 SPAG11BQ08648 103 aa11.37□□□□□ -0.59
TMEM88-201ENST00000301599 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
TMEM88-201ENST00000301599 Q6ZRP5 223 aa11.37□□□□□ -0.59
TMEM88-201ENST00000301599 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
TMEM88-201ENST00000301599 NMUP48645 174 aa11.36□□□□□ -0.59
TMEM88-201ENST00000301599 HERVK_113P61574 105 aa11.36□□□□□ -0.59
TMEM88-201ENST00000301599 TAL2Q16559 108 aa11.36□□□□□ -0.59
TMEM88-201ENST00000301599 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
TMEM88-201ENST00000301599 SPINK6Q6UWN8 80 aa11.35□□□□□ -0.59
TMEM88-201ENST00000301599 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
TMEM88-201ENST00000301599 HMCN2Q8NDA2 5059 aa11.35□□□□□ -0.59
TMEM88-201ENST00000301599 A0A1W2PNN7 141 aa11.34□□□□□ -0.59
TMEM88-201ENST00000301599 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
TMEM88-201ENST00000301599 A0A0J9YXV3 536 aa11.33□□□□□ -0.6
TMEM88-201ENST00000301599 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
TMEM88-201ENST00000301599 PMVKQ15126 192 aa11.33□□□□□ -0.6
TMEM88-201ENST00000301599 C2orf91Q6ZV80 131 aa11.33□□□□□ -0.6
TMEM88-201ENST00000301599 NDUFA1O15239 70 aa11.32□□□□□ -0.6
TMEM88-201ENST00000301599 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM88-201ENST00000301599 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
TMEM88-201ENST00000301599 IGLV4-3A0A075B6K6 122 aa11.31□□□□□ -0.6
TMEM88-201ENST00000301599 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
TMEM88-201ENST00000301599 A0A087WZ39 114 aa11.3□□□□□ -0.6
TMEM88-201ENST00000301599 LINC00242Q5T6M2 205 aa11.3□□□□□ -0.6
TMEM88-201ENST00000301599 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
TMEM88-201ENST00000301599 E9PLD3 99 aa11.29□□□□□ -0.6
TMEM88-201ENST00000301599 H3BRM9 83 aa11.29□□□□□ -0.6
TMEM88-201ENST00000301599 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
TMEM88-201ENST00000301599 UBE2V1Q13404 147 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms