RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TRAV12-1A0A0B4J245 112 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 C11orf86A6NJI1 115 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 COX7A2LO14548 114 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 ATP5LO75964 103 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 FABP4P15090 132 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 ZNF22P17026 224 aaPredicted RBP3.81□□□□□ -1.8
SSX3-201ENST00000298396 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 KIAA0087Q14695 138 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 HIST3H2BBQ8N257 126 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 C2orf88Q9BSF0 95 aa3.81□□□□□ -1.8
SSX3-201ENST00000298396 IGHV1-58A0A0C4DH39 117 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 hDV102S1A0JD36 115 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
SSX3-201ENST00000298396 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 CHAC1Q9BUX1 264 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 MRPL35Q9NZE8 188 aaKnown RBP3.8□□□□□ -1.8
SSX3-201ENST00000298396 CHTOPQ9Y3Y2 248 aaKnown RBP3.8□□□□□ -1.8
SSX3-201ENST00000298396 HERC2O95714 4834 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 FAT1Q14517 4588 aa3.8□□□□□ -1.8
SSX3-201ENST00000298396 IGLV5-39A0A0G2JS06 123 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 H0Y8G0 127 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 PANO1I0J062 215 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 SPINK8P0C7L1 97 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 C3orf79P0CE67 100 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 SNRPEP62304 92 aaKnown RBP3.79□□□□□ -1.8
SSX3-201ENST00000298396 HERVK_113P63121 156 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 C14orf177Q52M58 125 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 LINC01561Q8N1V8 128 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 LINC00469Q8N7U9 141 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 PACRGQ96M98 296 aaPredicted RBP3.79□□□□□ -1.8
SSX3-201ENST00000298396 HIST1H2BLQ99880 126 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 HSPB8Q9UJY1 196 aa3.79□□□□□ -1.8
SSX3-201ENST00000298396 IGLV5-52A0A0A0MRZ9 124 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 C16orf90A8MZG2 172 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 F8VRH5 84 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 SYS1-DBNDD2H3BUS1 97 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 LINC01545Q5VT33 79 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 CFAP161Q6P656 301 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 C2orf82Q6UX34 121 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 Q6ZRU5 148 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 Q6ZSA8 131 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 C9orf163Q8N9P6 203 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 OR10D4PQ8NGN7 298 aa3.78□□□□□ -1.8
SSX3-201ENST00000298396 GEMIN7Q9H840 131 aaKnown RBP3.78□□□□□ -1.8
SSX3-201ENST00000298396 TMEM223A0PJW6 202 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 TSPEAR-AS2P59090 65 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 SEC11AP67812 179 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 HAMPP81172 84 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 UNQ6190/PRO20217Q6UXQ8 127 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 SDIM1Q6ZPB5 146 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 Q8IZM0 81 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 C2orf48Q96LS8 159 aa3.77□□□□□ -1.81
SSX3-201ENST00000298396 APOMO95445 188 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 XGP55808 180 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 KRTDAPP60985 99 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 SYCNQ0VAF6 134 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 C9orf116Q5BN46 136 aaPredicted RBP3.76□□□□□ -1.81
SSX3-201ENST00000298396 TMEM170BQ5T4T1 132 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 PET117Q6UWS5 81 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 MAP1LC3CQ9BXW4 147 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
SSX3-201ENST00000298396 A0A096LNI7 61 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 DPM2O94777 84 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 IGKCP01834 107 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 S100A6P06703 90 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 CHTF8P0CG12 524 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
SSX3-201ENST00000298396 CAMK2N2Q96S95 79 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 TOMM7Q9P0U1 55 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
SSX3-201ENST00000298396 IGKV2D-26A0A0A0MRZ7 120 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 H3BRM9 83 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 NDUFA1O15239 70 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 PLNP26678 52 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 PCP4P48539 62 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 ATOH7Q8N100 152 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
SSX3-201ENST00000298396 ZNF625Q96I27 306 aaPredicted RBP3.74□□□□□ -1.81
SSX3-201ENST00000298396 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
SSX3-201ENST00000298396 TRBV30A0A0K0K1B3 111 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 F8WDY8 70 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 S100A2P29034 98 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 MAJINQ3KP22 176 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 C6orf226Q5I0X4 101 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 Q6ZRP5 223 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 STPG4Q8N801 248 aa3.73□□□□□ -1.81
SSX3-201ENST00000298396 IGKV2-24A0A0C4DH68 120 aa3.72□□□□□ -1.81
SSX3-201ENST00000298396 LOC107984640A0A0U1RRK4 108 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms