RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
FNDC1-201ENST00000297267 MRPL55Q7Z7F7 128 aaKnown RBP10.95□□□□□ -0.66
FNDC1-201ENST00000297267 Q6ZVQ6 151 aa10.95□□□□□ -0.66
FNDC1-201ENST00000297267 IGLV5-52A0A0A0MRZ9 124 aa10.95□□□□□ -0.66
FNDC1-201ENST00000297267 PIEZO2Q9H5I5 2752 aa10.94□□□□□ -0.66
FNDC1-201ENST00000297267 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
FNDC1-201ENST00000297267 BRCA2P51587 3418 aa10.94□□□□□ -0.66
FNDC1-201ENST00000297267 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
FNDC1-201ENST00000297267 Q9BRP9 147 aa10.92□□□□□ -0.66
FNDC1-201ENST00000297267 Q6ZRU5 148 aa10.92□□□□□ -0.66
FNDC1-201ENST00000297267 CRYGAP11844 174 aa10.91□□□□□ -0.66
FNDC1-201ENST00000297267 V9GYY9 64 aa10.91□□□□□ -0.66
FNDC1-201ENST00000297267 COX17Q14061 63 aa10.91□□□□□ -0.66
FNDC1-201ENST00000297267 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
FNDC1-201ENST00000297267 HIVEP2P31629 2446 aa10.9□□□□□ -0.66
FNDC1-201ENST00000297267 ATP5EP2Q5VTU8 51 aa10.89□□□□□ -0.67
FNDC1-201ENST00000297267 IL17DQ8TAD2 202 aa10.89□□□□□ -0.67
FNDC1-201ENST00000297267 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
FNDC1-201ENST00000297267 A0A087WSZ3 146 aa10.88□□□□□ -0.67
FNDC1-201ENST00000297267 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
FNDC1-201ENST00000297267 PTPN13Q12923 2485 aa10.88□□□□□ -0.67
FNDC1-201ENST00000297267 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
FNDC1-201ENST00000297267 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
FNDC1-201ENST00000297267 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 Q6JHZ5 121 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 LINC00846Q9NV44 126 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 SPG11Q96JI7 2443 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 BDP1A6H8Y1 2624 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
FNDC1-201ENST00000297267 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
FNDC1-201ENST00000297267 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
FNDC1-201ENST00000297267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.86□□□□□ -0.67
FNDC1-201ENST00000297267 SERP1Q9Y6X1 66 aa10.85□□□□□ -0.67
FNDC1-201ENST00000297267 AMELXQ99217 191 aa10.85□□□□□ -0.67
FNDC1-201ENST00000297267 PRYO14603 147 aa10.84□□□□□ -0.67
FNDC1-201ENST00000297267 Q8N2B8 174 aa10.84□□□□□ -0.67
FNDC1-201ENST00000297267 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
FNDC1-201ENST00000297267 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
FNDC1-201ENST00000297267 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
FNDC1-201ENST00000297267 H0Y9P7 68 aa10.82□□□□□ -0.68
FNDC1-201ENST00000297267 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
FNDC1-201ENST00000297267 MUC4Q99102 2169 aa10.82□□□□□ -0.68
FNDC1-201ENST00000297267 SMIM29Q86T20 159 aa10.81□□□□□ -0.68
FNDC1-201ENST00000297267 FAM218AQ96MZ4 157 aa10.81□□□□□ -0.68
FNDC1-201ENST00000297267 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
FNDC1-201ENST00000297267 HCG22E2RYF7 251 aa10.8□□□□□ -0.68
FNDC1-201ENST00000297267 KIAA0087Q14695 138 aa10.8□□□□□ -0.68
FNDC1-201ENST00000297267 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
FNDC1-201ENST00000297267 CREBBPQ92793 2442 aa10.78□□□□□ -0.68
FNDC1-201ENST00000297267 K7ERS5 55 aa10.78□□□□□ -0.68
FNDC1-201ENST00000297267 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
FNDC1-201ENST00000297267 CDIP1Q9H305 208 aa10.77□□□□□ -0.69
FNDC1-201ENST00000297267 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
FNDC1-201ENST00000297267 PCSK5Q92824 1860 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 IGLV8-61A0A075B6I0 122 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 IMUPQ9GZP8 106 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 LAMA3Q16787 3333 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 IGKV2D-30A0A075B6S6 120 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 TRBV7-7A0A0K0K1E9 115 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
FNDC1-201ENST00000297267 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
FNDC1-201ENST00000297267 SMCR5Q8TEV8 140 aa10.74□□□□□ -0.69
FNDC1-201ENST00000297267 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
FNDC1-201ENST00000297267 PHF5AQ7RTV0 110 aaKnown RBP10.74□□□□□ -0.69
FNDC1-201ENST00000297267 NDUFC1O43677 76 aa10.73□□□□□ -0.69
FNDC1-201ENST00000297267 SZT2Q5T011 3432 aa10.73□□□□□ -0.69
FNDC1-201ENST00000297267 BPTFQ12830 3046 aa10.73□□□□□ -0.69
FNDC1-201ENST00000297267 ST20-AS1Q8NBB2 130 aa10.72□□□□□ -0.69
FNDC1-201ENST00000297267 C11orf72Q8NBR9 251 aa10.72□□□□□ -0.69
FNDC1-201ENST00000297267 SPACA4Q8TDM5 124 aa10.72□□□□□ -0.69
FNDC1-201ENST00000297267 FAM168BA1KXE4 195 aa10.71□□□□□ -0.69
FNDC1-201ENST00000297267 FSHBP01225 129 aa10.71□□□□□ -0.7
FNDC1-201ENST00000297267 LINC00474Q9P2X8 69 aa10.7□□□□□ -0.7
FNDC1-201ENST00000297267 MOBPQ13875 183 aa10.7□□□□□ -0.7
FNDC1-201ENST00000297267 C1orf134Q5TEV5 83 aa10.7□□□□□ -0.7
FNDC1-201ENST00000297267 C2orf48Q96LS8 159 aa10.7□□□□□ -0.7
FNDC1-201ENST00000297267 MUC7Q8TAX7 377 aa10.69□□□□□ -0.7
FNDC1-201ENST00000297267 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
FNDC1-201ENST00000297267 C6orf48Q9UBA6 75 aa10.69□□□□□ -0.7
FNDC1-201ENST00000297267 C10orf142B7Z368 130 aa10.69□□□□□ -0.7
FNDC1-201ENST00000297267 COL4A2P08572 1712 aa10.69□□□□□ -0.7
FNDC1-201ENST00000297267 FHL3Q13643 280 aa10.68□□□□□ -0.7
FNDC1-201ENST00000297267 SPATA3Q8NHX4 192 aa10.68□□□□□ -0.7
FNDC1-201ENST00000297267 ANKHD1Q8IWZ3 2542 aaKnown RBP10.68□□□□□ -0.7
FNDC1-201ENST00000297267 CSDC2Q9Y534 153 aaKnown RBP10.68□□□□□ -0.7
FNDC1-201ENST00000297267 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
FNDC1-201ENST00000297267 ATP5EP56381 51 aaPredicted RBP10.68□□□□□ -0.7
FNDC1-201ENST00000297267 C16orf95Q9H693 158 aa10.67□□□□□ -0.7
FNDC1-201ENST00000297267 CDH23Q9H251 3354 aa10.67□□□□□ -0.7
FNDC1-201ENST00000297267 MDFIQ99750 246 aa10.67□□□□□ -0.7
FNDC1-201ENST00000297267 SMIM26A0A096LP01 95 aa10.66□□□□□ -0.7
FNDC1-201ENST00000297267 A0A0G2JQZ4 141 aa10.65□□□□□ -0.7
FNDC1-201ENST00000297267 A0A1W2PNN7 141 aa10.65□□□□□ -0.7
FNDC1-201ENST00000297267 C1orf64Q8NEQ6 169 aa10.65□□□□□ -0.71
FNDC1-201ENST00000297267 TMEM254Q8TBM7 123 aa10.64□□□□□ -0.71
FNDC1-201ENST00000297267 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
FNDC1-201ENST00000297267 LINC00315P59091 139 aa10.63□□□□□ -0.71
FNDC1-201ENST00000297267 SPAG11AQ6PDA7 123 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms