RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 UNQ6190/PRO20217Q6UXQ8 127 aa11.47□□□□□ -0.57
ARHGEF28-201ENST00000296794 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
ARHGEF28-201ENST00000296794 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
ARHGEF28-201ENST00000296794 C9orf116Q5BN46 136 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF28-201ENST00000296794 RETNQ9HD89 108 aa11.46□□□□□ -0.57
ARHGEF28-201ENST00000296794 A0A087WVE0 104 aa11.46□□□□□ -0.58
ARHGEF28-201ENST00000296794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.46□□□□□ -0.58
ARHGEF28-201ENST00000296794 Q8N814 137 aa11.46□□□□□ -0.58
ARHGEF28-201ENST00000296794 MUC7Q8TAX7 377 aa11.46□□□□□ -0.58
ARHGEF28-201ENST00000296794 NDUFC1O43677 76 aa11.45□□□□□ -0.58
ARHGEF28-201ENST00000296794 PRR3P79522 188 aaKnown RBP11.45□□□□□ -0.58
ARHGEF28-201ENST00000296794 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
ARHGEF28-201ENST00000296794 CDIP1Q9H305 208 aa11.44□□□□□ -0.58
ARHGEF28-201ENST00000296794 ANKRD17O75179 2603 aaKnown RBP11.44□□□□□ -0.58
ARHGEF28-201ENST00000296794 WFDC10BQ8IUB3 73 aa11.44□□□□□ -0.58
ARHGEF28-201ENST00000296794 DHRS4-AS1Q9P1J3 65 aa11.44□□□□□ -0.58
ARHGEF28-201ENST00000296794 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
ARHGEF28-201ENST00000296794 FHL2Q14192 279 aa11.43□□□□□ -0.58
ARHGEF28-201ENST00000296794 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
ARHGEF28-201ENST00000296794 M0QXV9 152 aa11.43□□□□□ -0.58
ARHGEF28-201ENST00000296794 LINC00315P59091 139 aa11.42□□□□□ -0.58
ARHGEF28-201ENST00000296794 DNAH12Q6ZR08 3092 aa11.42□□□□□ -0.58
ARHGEF28-201ENST00000296794 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
ARHGEF28-201ENST00000296794 ATP5EP56381 51 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF28-201ENST00000296794 Q6ZTC4 211 aa11.41□□□□□ -0.58
ARHGEF28-201ENST00000296794 RPL37AP8A6NKH3 93 aa11.41□□□□□ -0.58
ARHGEF28-201ENST00000296794 AGRNO00468 2067 aa11.4□□□□□ -0.58
ARHGEF28-201ENST00000296794 TRBV10-3A0A0K0K1G6 114 aa11.4□□□□□ -0.58
ARHGEF28-201ENST00000296794 ZNF706Q9Y5V0 76 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF28-201ENST00000296794 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF28-201ENST00000296794 WFDC13Q8IUB5 93 aa11.38□□□□□ -0.59
ARHGEF28-201ENST00000296794 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
ARHGEF28-201ENST00000296794 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 TRAV7A0A075B6U4 112 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 EGFEM1PQ0D2K5 195 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
ARHGEF28-201ENST00000296794 PRO0461Q9UI25 63 aa11.35□□□□□ -0.59
ARHGEF28-201ENST00000296794 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
ARHGEF28-201ENST00000296794 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF28-201ENST00000296794 PRR4Q16378 134 aa11.34□□□□□ -0.59
ARHGEF28-201ENST00000296794 C11orf72Q8NBR9 251 aa11.34□□□□□ -0.59
ARHGEF28-201ENST00000296794 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
ARHGEF28-201ENST00000296794 LINC00846Q9NV44 126 aa11.32□□□□□ -0.6
ARHGEF28-201ENST00000296794 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
ARHGEF28-201ENST00000296794 FAM30AQ9NZY2 134 aa11.32□□□□□ -0.6
ARHGEF28-201ENST00000296794 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
ARHGEF28-201ENST00000296794 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
ARHGEF28-201ENST00000296794 COL4A2P08572 1712 aa11.31□□□□□ -0.6
ARHGEF28-201ENST00000296794 Q8N2B8 174 aa11.31□□□□□ -0.6
ARHGEF28-201ENST00000296794 TRBV7-7A0A0K0K1E9 115 aa11.3□□□□□ -0.6
ARHGEF28-201ENST00000296794 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
ARHGEF28-201ENST00000296794 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
ARHGEF28-201ENST00000296794 Q8N3U1 123 aa11.28□□□□□ -0.6
ARHGEF28-201ENST00000296794 SMIM26A0A096LP01 95 aa11.28□□□□□ -0.6
ARHGEF28-201ENST00000296794 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
ARHGEF28-201ENST00000296794 SVIPQ8NHG7 77 aa11.27□□□□□ -0.6
ARHGEF28-201ENST00000296794 A8MTW9 85 aa11.27□□□□□ -0.61
ARHGEF28-201ENST00000296794 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
ARHGEF28-201ENST00000296794 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
ARHGEF28-201ENST00000296794 MGAM2Q2M2H8 2515 aa11.27□□□□□ -0.61
ARHGEF28-201ENST00000296794 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 PTPRBP23467 1997 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 V9GYY9 64 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 USP24Q9UPU5 2620 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 SERP1Q9Y6X1 66 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 IGLV5-52A0A0A0MRZ9 124 aa11.26□□□□□ -0.61
ARHGEF28-201ENST00000296794 C1orf134Q5TEV5 83 aa11.25□□□□□ -0.61
ARHGEF28-201ENST00000296794 Q9UF83 564 aa11.25□□□□□ -0.61
ARHGEF28-201ENST00000296794 LINC01561Q8N1V8 128 aa11.25□□□□□ -0.61
ARHGEF28-201ENST00000296794 FHL3Q13643 280 aa11.24□□□□□ -0.61
ARHGEF28-201ENST00000296794 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
ARHGEF28-201ENST00000296794 Q6ZVQ6 151 aa11.23□□□□□ -0.61
ARHGEF28-201ENST00000296794 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
ARHGEF28-201ENST00000296794 LYPD5Q6UWN5 251 aa11.22□□□□□ -0.61
ARHGEF28-201ENST00000296794 SEC61GP60059 68 aa11.22□□□□□ -0.61
ARHGEF28-201ENST00000296794 CASC2Q6XLA1 102 aa11.21□□□□□ -0.61
ARHGEF28-201ENST00000296794 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.61
ARHGEF28-201ENST00000296794 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
ARHGEF28-201ENST00000296794 IGLV9-49A0A0B4J1Y8 123 aa11.21□□□□□ -0.62
ARHGEF28-201ENST00000296794 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.62
ARHGEF28-201ENST00000296794 KRTAP24-1Q3LI83 254 aa11.2□□□□□ -0.62
ARHGEF28-201ENST00000296794 LINC01547P58512 204 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF28-201ENST00000296794 FAM218AQ96MZ4 157 aa11.19□□□□□ -0.62
ARHGEF28-201ENST00000296794 MAST4O15021 2626 aa11.19□□□□□ -0.62
ARHGEF28-201ENST00000296794 PRYO14603 147 aa11.19□□□□□ -0.62
ARHGEF28-201ENST00000296794 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-201ENST00000296794 UTRNP46939 3433 aa11.18□□□□□ -0.62
ARHGEF28-201ENST00000296794 PCSK5Q92824 1860 aa11.18□□□□□ -0.62
ARHGEF28-201ENST00000296794 MUC4Q99102 2169 aa11.18□□□□□ -0.62
ARHGEF28-201ENST00000296794 REG3GQ6UW15 175 aa11.18□□□□□ -0.62
ARHGEF28-201ENST00000296794 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
ARHGEF28-201ENST00000296794 FSHBP01225 129 aa11.17□□□□□ -0.62
ARHGEF28-201ENST00000296794 F8WDY8 70 aa11.16□□□□□ -0.62
ARHGEF28-201ENST00000296794 Q6ZRU5 148 aa11.16□□□□□ -0.62
ARHGEF28-201ENST00000296794 LINC00208Q96KT6 92 aa11.16□□□□□ -0.62
ARHGEF28-201ENST00000296794 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
ARHGEF28-201ENST00000296794 A6NED7 52 aa11.15□□□□□ -0.62
ARHGEF28-201ENST00000296794 KLK9Q2XQG4 91 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 224.1 ms