RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
CDCP1-201ENST00000296129 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.46
CDCP1-201ENST00000296129 CELA1Q9UNI1 258 aa12.15□□□□□ -0.46
CDCP1-201ENST00000296129 SERP2Q8N6R1 65 aa12.15□□□□□ -0.46
CDCP1-201ENST00000296129 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
CDCP1-201ENST00000296129 Q6JHZ5 121 aa12.14□□□□□ -0.47
CDCP1-201ENST00000296129 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
CDCP1-201ENST00000296129 PTPRBP23467 1997 aa12.13□□□□□ -0.47
CDCP1-201ENST00000296129 LINC01546A6NGU7 62 aa12.12□□□□□ -0.47
CDCP1-201ENST00000296129 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
CDCP1-201ENST00000296129 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
CDCP1-201ENST00000296129 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
CDCP1-201ENST00000296129 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
CDCP1-201ENST00000296129 PCSK5Q92824 1860 aa12.11□□□□□ -0.47
CDCP1-201ENST00000296129 BRK1Q8WUW1 75 aa12.1□□□□□ -0.47
CDCP1-201ENST00000296129 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
CDCP1-201ENST00000296129 LINC00315P59091 139 aa12.09□□□□□ -0.47
CDCP1-201ENST00000296129 C1orf137Q5JT78 98 aa12.09□□□□□ -0.47
CDCP1-201ENST00000296129 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
CDCP1-201ENST00000296129 CCDC179H3BU77 68 aa12.09□□□□□ -0.47
CDCP1-201ENST00000296129 LINC01561Q8N1V8 128 aa12.08□□□□□ -0.48
CDCP1-201ENST00000296129 FHL3Q13643 280 aa12.08□□□□□ -0.48
CDCP1-201ENST00000296129 AGRNO00468 2067 aa12.08□□□□□ -0.48
CDCP1-201ENST00000296129 FAM240AA0A1B0GVK7 77 aa12.07□□□□□ -0.48
CDCP1-201ENST00000296129 F8WDY8 70 aa12.07□□□□□ -0.48
CDCP1-201ENST00000296129 Q6ZRU5 148 aa12.07□□□□□ -0.48
CDCP1-201ENST00000296129 COX7CP15954 63 aa12.06□□□□□ -0.48
CDCP1-201ENST00000296129 MRPL55Q7Z7F7 128 aaKnown RBP12.06□□□□□ -0.48
CDCP1-201ENST00000296129 MYO18BQ8IUG5 2567 aa12.06□□□□□ -0.48
CDCP1-201ENST00000296129 A8MTW9 85 aa12.04□□□□□ -0.48
CDCP1-201ENST00000296129 NDUFC1O43677 76 aa12.04□□□□□ -0.48
CDCP1-201ENST00000296129 PRR4Q16378 134 aa12.03□□□□□ -0.48
CDCP1-201ENST00000296129 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
CDCP1-201ENST00000296129 LINC01556Q5JQF7 62 aa12.02□□□□□ -0.48
CDCP1-201ENST00000296129 LINC00337Q8N6G1 96 aa12.02□□□□□ -0.48
CDCP1-201ENST00000296129 PRYO14603 147 aa12.02□□□□□ -0.49
CDCP1-201ENST00000296129 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
CDCP1-201ENST00000296129 A0A087WVE0 104 aa12.02□□□□□ -0.49
CDCP1-201ENST00000296129 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
CDCP1-201ENST00000296129 CEP295Q9C0D2 2601 aa12.01□□□□□ -0.49
CDCP1-201ENST00000296129 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
CDCP1-201ENST00000296129 Q9BRP9 147 aa12.01□□□□□ -0.49
CDCP1-201ENST00000296129 ATP5EP56381 51 aaPredicted RBP12.01□□□□□ -0.49
CDCP1-201ENST00000296129 Q6Q795 121 aa12.01□□□□□ -0.49
CDCP1-201ENST00000296129 LINC00575Q6W349 94 aa12□□□□□ -0.49
CDCP1-201ENST00000296129 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
CDCP1-201ENST00000296129 SPTSSBQ8NFR3 76 aa11.99□□□□□ -0.49
CDCP1-201ENST00000296129 IGHV3OR16-9A0A0B4J2B5 98 aa11.97□□□□□ -0.49
CDCP1-201ENST00000296129 Q9UF83 564 aa11.97□□□□□ -0.49
CDCP1-201ENST00000296129 ESRGQ1W209 222 aa11.97□□□□□ -0.49
CDCP1-201ENST00000296129 X6R8D5 127 aa11.97□□□□□ -0.49
CDCP1-201ENST00000296129 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
CDCP1-201ENST00000296129 Q8N9L7 120 aa11.94□□□□□ -0.5
CDCP1-201ENST00000296129 PRLHP81277 87 aa11.94□□□□□ -0.5
CDCP1-201ENST00000296129 C22orf24Q9Y442 160 aa11.94□□□□□ -0.5
CDCP1-201ENST00000296129 TRAV7A0A075B6U4 112 aa11.93□□□□□ -0.5
CDCP1-201ENST00000296129 IGHV6-1A0A0B4J1U7 121 aa11.93□□□□□ -0.5
CDCP1-201ENST00000296129 FSHBP01225 129 aa11.92□□□□□ -0.5
CDCP1-201ENST00000296129 KRTAP24-1Q3LI83 254 aa11.92□□□□□ -0.5
CDCP1-201ENST00000296129 A0A087WSZ3 146 aa11.91□□□□□ -0.5
CDCP1-201ENST00000296129 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
CDCP1-201ENST00000296129 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.5
CDCP1-201ENST00000296129 PRR15LQ9BU68 103 aa11.9□□□□□ -0.5
CDCP1-201ENST00000296129 IGLV5-45A0A087WSX0 123 aa11.9□□□□□ -0.5
CDCP1-201ENST00000296129 SBSPONQ8IVN8 264 aa11.9□□□□□ -0.5
CDCP1-201ENST00000296129 MDFIQ99750 246 aa11.9□□□□□ -0.5
CDCP1-201ENST00000296129 SVIPQ8NHG7 77 aa11.9□□□□□ -0.51
CDCP1-201ENST00000296129 KLK9Q2XQG4 91 aa11.89□□□□□ -0.51
CDCP1-201ENST00000296129 Q8N3U1 123 aa11.89□□□□□ -0.51
CDCP1-201ENST00000296129 V9GYY9 64 aa11.89□□□□□ -0.51
CDCP1-201ENST00000296129 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
CDCP1-201ENST00000296129 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
CDCP1-201ENST00000296129 LINC00846Q9NV44 126 aa11.88□□□□□ -0.51
CDCP1-201ENST00000296129 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
CDCP1-201ENST00000296129 Q6ZVQ6 151 aa11.88□□□□□ -0.51
CDCP1-201ENST00000296129 JMJD1CQ15652 2540 aa11.87□□□□□ -0.51
CDCP1-201ENST00000296129 DNAH12Q6ZR08 3092 aa11.87□□□□□ -0.51
CDCP1-201ENST00000296129 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
CDCP1-201ENST00000296129 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
CDCP1-201ENST00000296129 TLN2Q9Y4G6 2542 aa11.85□□□□□ -0.51
CDCP1-201ENST00000296129 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
CDCP1-201ENST00000296129 RETNLBQ9BQ08 111 aa11.85□□□□□ -0.51
CDCP1-201ENST00000296129 H3BNG1 76 aa11.84□□□□□ -0.51
CDCP1-201ENST00000296129 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
CDCP1-201ENST00000296129 ZNF462Q96JM2 2506 aa11.83□□□□□ -0.52
CDCP1-201ENST00000296129 UTRNP46939 3433 aa11.83□□□□□ -0.52
CDCP1-201ENST00000296129 Q8NAQ8 132 aa11.83□□□□□ -0.52
CDCP1-201ENST00000296129 A0A0U1RQV1 116 aa11.83□□□□□ -0.52
CDCP1-201ENST00000296129 KIAA0087Q14695 138 aa11.82□□□□□ -0.52
CDCP1-201ENST00000296129 LINC00167Q96N53 147 aa11.81□□□□□ -0.52
CDCP1-201ENST00000296129 CHD8Q9HCK8 2581 aa11.8□□□□□ -0.52
CDCP1-201ENST00000296129 FAM218AQ96MZ4 157 aa11.8□□□□□ -0.52
CDCP1-201ENST00000296129 A6NED7 52 aa11.79□□□□□ -0.52
CDCP1-201ENST00000296129 K7ERS5 55 aa11.79□□□□□ -0.52
CDCP1-201ENST00000296129 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
CDCP1-201ENST00000296129 SERP1Q9Y6X1 66 aa11.79□□□□□ -0.52
CDCP1-201ENST00000296129 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
CDCP1-201ENST00000296129 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
CDCP1-201ENST00000296129 HCG22E2RYF7 251 aa11.77□□□□□ -0.52
CDCP1-201ENST00000296129 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms