RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 UTP20O75691 2785 aaKnown RBP9.53□□□□□ -0.88
SCAF4-201ENST00000286835 ATOX1O00244 68 aa9.53□□□□□ -0.88
SCAF4-201ENST00000286835 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
SCAF4-201ENST00000286835 IGLV5-39A0A0G2JS06 123 aa9.53□□□□□ -0.88
SCAF4-201ENST00000286835 WFDC9Q8NEX5 89 aa9.53□□□□□ -0.88
SCAF4-201ENST00000286835 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
SCAF4-201ENST00000286835 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
SCAF4-201ENST00000286835 ITPR2Q14571 2701 aa9.52□□□□□ -0.89
SCAF4-201ENST00000286835 APOC4P55056 127 aa9.52□□□□□ -0.89
SCAF4-201ENST00000286835 HAMPP81172 84 aa9.52□□□□□ -0.89
SCAF4-201ENST00000286835 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
SCAF4-201ENST00000286835 C16orf74Q96GX8 76 aa9.52□□□□□ -0.89
SCAF4-201ENST00000286835 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 TRBV7-7A0A0K0K1E9 115 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 IMUPQ9GZP8 106 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 STAB1Q9NY15 2570 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 LINC00482Q8N8I6 264 aa9.51□□□□□ -0.89
SCAF4-201ENST00000286835 FBN2P35556 2912 aa9.5□□□□□ -0.89
SCAF4-201ENST00000286835 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
SCAF4-201ENST00000286835 TRAV25A0A0B4J276 109 aa9.49□□□□□ -0.89
SCAF4-201ENST00000286835 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
SCAF4-201ENST00000286835 CXCL5P42830 114 aa9.49□□□□□ -0.89
SCAF4-201ENST00000286835 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
SCAF4-201ENST00000286835 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
SCAF4-201ENST00000286835 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
SCAF4-201ENST00000286835 LINC00846Q9NV44 126 aa9.48□□□□□ -0.89
SCAF4-201ENST00000286835 COX7CP15954 63 aa9.48□□□□□ -0.89
SCAF4-201ENST00000286835 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
SCAF4-201ENST00000286835 UBR5O95071 2799 aaPredicted RBP9.47□□□□□ -0.89
SCAF4-201ENST00000286835 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.89
SCAF4-201ENST00000286835 NF1P21359 2839 aa9.46□□□□□ -0.89
SCAF4-201ENST00000286835 COL6A5A8TX70 2615 aa9.46□□□□□ -0.89
SCAF4-201ENST00000286835 J3KT08 172 aa9.46□□□□□ -0.89
SCAF4-201ENST00000286835 CELSR2Q9HCU4 2923 aa9.46□□□□□ -0.9
SCAF4-201ENST00000286835 LINC00269Q8N2A0 174 aa9.45□□□□□ -0.9
SCAF4-201ENST00000286835 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
SCAF4-201ENST00000286835 C9orf116Q5BN46 136 aaPredicted RBP9.45□□□□□ -0.9
SCAF4-201ENST00000286835 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
SCAF4-201ENST00000286835 FAM222AQ5U5X8 452 aa9.45□□□□□ -0.9
SCAF4-201ENST00000286835 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
SCAF4-201ENST00000286835 LINC00959A0A1B0GUT2 108 aa9.44□□□□□ -0.9
SCAF4-201ENST00000286835 GHRHP01286 108 aa9.44□□□□□ -0.9
SCAF4-201ENST00000286835 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
SCAF4-201ENST00000286835 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
SCAF4-201ENST00000286835 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
SCAF4-201ENST00000286835 C9orf129Q5T035 196 aaKnown RBP9.44□□□□□ -0.9
SCAF4-201ENST00000286835 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
SCAF4-201ENST00000286835 C6orf99Q4VX62 202 aa9.43□□□□□ -0.9
SCAF4-201ENST00000286835 DSCR8Q96T75 97 aa9.42□□□□□ -0.9
SCAF4-201ENST00000286835 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
SCAF4-201ENST00000286835 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
SCAF4-201ENST00000286835 A8MTW9 85 aa9.41□□□□□ -0.9
SCAF4-201ENST00000286835 OXLD1Q5BKU9 147 aa9.41□□□□□ -0.9
SCAF4-201ENST00000286835 MXRA5Q9NR99 2828 aa9.41□□□□□ -0.9
SCAF4-201ENST00000286835 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
SCAF4-201ENST00000286835 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.91
SCAF4-201ENST00000286835 A0A087WZ39 114 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 PRB2P02812 416 aaPredicted RBP9.39□□□□□ -0.91
SCAF4-201ENST00000286835 SERP2Q8N6R1 65 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 NOTCH1P46531 2555 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 BAHCC1Q9P281 2608 aa9.39□□□□□ -0.91
SCAF4-201ENST00000286835 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
SCAF4-201ENST00000286835 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
SCAF4-201ENST00000286835 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
SCAF4-201ENST00000286835 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
SCAF4-201ENST00000286835 FHL2Q14192 279 aa9.38□□□□□ -0.91
SCAF4-201ENST00000286835 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
SCAF4-201ENST00000286835 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
SCAF4-201ENST00000286835 UPK3BQ9BT76 320 aa9.37□□□□□ -0.91
SCAF4-201ENST00000286835 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
SCAF4-201ENST00000286835 XAGE1AQ9HD64 81 aa9.37□□□□□ -0.91
SCAF4-201ENST00000286835 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
SCAF4-201ENST00000286835 Q6JHZ5 121 aa9.36□□□□□ -0.91
SCAF4-201ENST00000286835 KIR2DL5BQ8NHK3 375 aa9.36□□□□□ -0.91
SCAF4-201ENST00000286835 KLK12Q9UKR0 248 aa9.36□□□□□ -0.91
SCAF4-201ENST00000286835 SPAG11BQ08648 103 aa9.36□□□□□ -0.91
SCAF4-201ENST00000286835 REG3AQ06141 175 aa9.35□□□□□ -0.91
SCAF4-201ENST00000286835 Q8N814 137 aa9.34□□□□□ -0.91
SCAF4-201ENST00000286835 CCKP06307 115 aa9.34□□□□□ -0.91
SCAF4-201ENST00000286835 Q8N3U1 123 aa9.34□□□□□ -0.91
SCAF4-201ENST00000286835 NBEAL1Q6ZS30 2694 aa9.33□□□□□ -0.92
SCAF4-201ENST00000286835 A0A096LNT2 108 aa9.33□□□□□ -0.92
SCAF4-201ENST00000286835 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
SCAF4-201ENST00000286835 CSMD2Q7Z408 3487 aa9.33□□□□□ -0.92
SCAF4-201ENST00000286835 Q6ZQY7 126 aa9.32□□□□□ -0.92
SCAF4-201ENST00000286835 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
SCAF4-201ENST00000286835 VPS13CQ709C8 3753 aa9.32□□□□□ -0.92
SCAF4-201ENST00000286835 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
SCAF4-201ENST00000286835 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
SCAF4-201ENST00000286835 Q8IZM0 81 aa9.31□□□□□ -0.92
SCAF4-201ENST00000286835 SNURFQ9Y675 71 aa9.31□□□□□ -0.92
SCAF4-201ENST00000286835 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
SCAF4-201ENST00000286835 FSHBP01225 129 aa9.3□□□□□ -0.92
SCAF4-201ENST00000286835 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
SCAF4-201ENST00000286835 DEFB105AQ8NG35 78 aa9.3□□□□□ -0.92
SCAF4-201ENST00000286835 PSCAO43653 123 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms