RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 Q6ZRU5 148 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 MAJINQ3KP22 176 aa11.15□□□□□ -0.62
SKP2-201ENST00000274254 UNQ6190/PRO20217Q6UXQ8 127 aa11.15□□□□□ -0.62
SKP2-201ENST00000274254 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
SKP2-201ENST00000274254 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.14□□□□□ -0.63
SKP2-201ENST00000274254 J3QQQ9 107 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 ANKRD39Q53RE8 183 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 CDPF1Q6NVV7 123 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 C9orf163Q8N9P6 203 aa11.14□□□□□ -0.63
SKP2-201ENST00000274254 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
SKP2-201ENST00000274254 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
SKP2-201ENST00000274254 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
SKP2-201ENST00000274254 TRBV30A0A0K0K1B3 111 aa11.12□□□□□ -0.63
SKP2-201ENST00000274254 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
SKP2-201ENST00000274254 RNF151Q2KHN1 245 aa11.12□□□□□ -0.63
SKP2-201ENST00000274254 NDUFA12Q9UI09 145 aa11.12□□□□□ -0.63
SKP2-201ENST00000274254 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
SKP2-201ENST00000274254 HECTD4Q9Y4D8 3996 aa11.1□□□□□ -0.63
SKP2-201ENST00000274254 NMUP48645 174 aa11.09□□□□□ -0.63
SKP2-201ENST00000274254 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
SKP2-201ENST00000274254 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
SKP2-201ENST00000274254 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
SKP2-201ENST00000274254 HERV-K104P63124 156 aa11.08□□□□□ -0.64
SKP2-201ENST00000274254 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
SKP2-201ENST00000274254 VAMP8Q9BV40 100 aa11.08□□□□□ -0.64
SKP2-201ENST00000274254 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
SKP2-201ENST00000274254 TTTY13Q9BZ97 58 aa11.07□□□□□ -0.64
SKP2-201ENST00000274254 TLX1NBP0CAT3 122 aa11.06□□□□□ -0.64
SKP2-201ENST00000274254 GCSHP23434 173 aa11.06□□□□□ -0.64
SKP2-201ENST00000274254 PAM16Q9Y3D7 125 aa11.06□□□□□ -0.64
SKP2-201ENST00000274254 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
SKP2-201ENST00000274254 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
SKP2-201ENST00000274254 ZNF815PA8K554 130 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 C16orf90A8MZG2 172 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
SKP2-201ENST00000274254 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
SKP2-201ENST00000274254 COX17Q14061 63 aa11.03□□□□□ -0.64
SKP2-201ENST00000274254 PKIGQ9Y2B9 76 aa11.03□□□□□ -0.64
SKP2-201ENST00000274254 A0A0J9YXY3 114 aa11.02□□□□□ -0.65
SKP2-201ENST00000274254 Q6ZRP5 223 aa11.02□□□□□ -0.65
SKP2-201ENST00000274254 LINC00587B1AMM8 73 aa11.01□□□□□ -0.65
SKP2-201ENST00000274254 PFN2P35080 140 aa11.01□□□□□ -0.65
SKP2-201ENST00000274254 A0A096LNI7 61 aa11□□□□□ -0.65
SKP2-201ENST00000274254 COX8AP10176 69 aa11□□□□□ -0.65
SKP2-201ENST00000274254 RPL18AQ02543 176 aaKnown RBP11□□□□□ -0.65
SKP2-201ENST00000274254 MEIG1Q5JSS6 88 aa11□□□□□ -0.65
SKP2-201ENST00000274254 PTTG1IPP53801 180 aa10.99□□□□□ -0.65
SKP2-201ENST00000274254 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
SKP2-201ENST00000274254 S100A12P80511 92 aa10.99□□□□□ -0.65
SKP2-201ENST00000274254 Q6ZSA8 131 aa10.99□□□□□ -0.65
SKP2-201ENST00000274254 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
SKP2-201ENST00000274254 LINC00158P58513 81 aa10.98□□□□□ -0.65
SKP2-201ENST00000274254 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
SKP2-201ENST00000274254 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
SKP2-201ENST00000274254 C14orf144Q96I85 54 aa10.98□□□□□ -0.65
SKP2-201ENST00000274254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
SKP2-201ENST00000274254 A0A0U1RRA0 63 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 PANO1I0J062 215 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 DLEU1O43261 78 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 CHTF8P0CG12 524 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 LITAFQ99732 161 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
SKP2-201ENST00000274254 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.65
SKP2-201ENST00000274254 IGKV2-24A0A0C4DH68 120 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 TIMM17BO60830 172 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 LINC00474Q9P2X8 69 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 TP73-AS1Q9UF72 201 aa10.96□□□□□ -0.65
SKP2-201ENST00000274254 MIR7-3HGQ8N6C7 128 aa10.95□□□□□ -0.66
SKP2-201ENST00000274254 C12orf57Q99622 126 aa10.95□□□□□ -0.66
SKP2-201ENST00000274254 C9orf129Q5T035 196 aaKnown RBP10.94□□□□□ -0.66
SKP2-201ENST00000274254 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
SKP2-201ENST00000274254 LINC00518Q8N0U6 118 aa10.94□□□□□ -0.66
SKP2-201ENST00000274254 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
SKP2-201ENST00000274254 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
SKP2-201ENST00000274254 SLC25A34Q6PIV7 304 aa10.93□□□□□ -0.66
SKP2-201ENST00000274254 DAND5Q8N907 189 aa10.93□□□□□ -0.66
SKP2-201ENST00000274254 EPPK1P58107 5090 aaKnown RBP10.91□□□□□ -0.66
SKP2-201ENST00000274254 TMEM238C9JI98 176 aa10.91□□□□□ -0.66
SKP2-201ENST00000274254 DNAH8Q96JB1 4490 aa10.9□□□□□ -0.66
SKP2-201ENST00000274254 LOC107984156A0A0G2JMH3 177 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 ARL17AQ8IVW1 177 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 A0A087WYN8 130 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 A0A1W2PNN7 141 aa10.89□□□□□ -0.67
SKP2-201ENST00000274254 EPM2AB3EWF7 344 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms