RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 EREGO14944 169 aa11.92□□□□□ -0.5
SEC22C-202ENST00000273156 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
SEC22C-202ENST00000273156 BVES-AS1Q5T3Y7 98 aa11.92□□□□□ -0.5
SEC22C-202ENST00000273156 C10orf126Q8N4M7 172 aa11.92□□□□□ -0.5
SEC22C-202ENST00000273156 TOMM7Q9P0U1 55 aa11.92□□□□□ -0.5
SEC22C-202ENST00000273156 A0A0J9YXY3 114 aa11.91□□□□□ -0.5
SEC22C-202ENST00000273156 K7EP13 123 aa11.91□□□□□ -0.5
SEC22C-202ENST00000273156 SRSF9Q13242 221 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEC22C-202ENST00000273156 PKD1P98161 4303 aa11.9□□□□□ -0.5
SEC22C-202ENST00000273156 APOMO95445 188 aa11.9□□□□□ -0.5
SEC22C-202ENST00000273156 HERV-K104P63124 156 aa11.9□□□□□ -0.5
SEC22C-202ENST00000273156 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
SEC22C-202ENST00000273156 PRSS2P07478 247 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 SPANXB1Q9NS25 103 aaPredicted RBP11.89□□□□□ -0.51
SEC22C-202ENST00000273156 TMEM238C9JI98 176 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 GCSHP23434 173 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 C6orf226Q5I0X4 101 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 C1orf43Q9BWL3 253 aa11.89□□□□□ -0.51
SEC22C-202ENST00000273156 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
SEC22C-202ENST00000273156 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
SEC22C-202ENST00000273156 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
SEC22C-202ENST00000273156 Q8IZM0 81 aa11.88□□□□□ -0.51
SEC22C-202ENST00000273156 CEND1Q8N111 149 aa11.88□□□□□ -0.51
SEC22C-202ENST00000273156 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
SEC22C-202ENST00000273156 HERC2O95714 4834 aa11.88□□□□□ -0.51
SEC22C-202ENST00000273156 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
SEC22C-202ENST00000273156 TIMM17BO60830 172 aa11.86□□□□□ -0.51
SEC22C-202ENST00000273156 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
SEC22C-202ENST00000273156 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
SEC22C-202ENST00000273156 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
SEC22C-202ENST00000273156 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
SEC22C-202ENST00000273156 IGKV2D-24A0A075B6R9 120 aa11.85□□□□□ -0.51
SEC22C-202ENST00000273156 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
SEC22C-202ENST00000273156 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
SEC22C-202ENST00000273156 Q6ZVH6 145 aa11.84□□□□□ -0.51
SEC22C-202ENST00000273156 RMI2Q96E14 147 aa11.84□□□□□ -0.51
SEC22C-202ENST00000273156 Q9HAA7 133 aa11.84□□□□□ -0.51
SEC22C-202ENST00000273156 A6NDN8 102 aa11.83□□□□□ -0.52
SEC22C-202ENST00000273156 CXCL5P42830 114 aa11.83□□□□□ -0.52
SEC22C-202ENST00000273156 CKS1BP61024 79 aa11.83□□□□□ -0.52
SEC22C-202ENST00000273156 KRTAP26-1Q6PEX3 210 aa11.83□□□□□ -0.52
SEC22C-202ENST00000273156 LITAFQ99732 161 aa11.82□□□□□ -0.52
SEC22C-202ENST00000273156 FXYD2P54710 66 aa11.82□□□□□ -0.52
SEC22C-202ENST00000273156 KIAA0087Q14695 138 aa11.82□□□□□ -0.52
SEC22C-202ENST00000273156 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
SEC22C-202ENST00000273156 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
SEC22C-202ENST00000273156 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
SEC22C-202ENST00000273156 A6NJY4 79 aa11.81□□□□□ -0.52
SEC22C-202ENST00000273156 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
SEC22C-202ENST00000273156 SPAG11BQ08648 103 aa11.81□□□□□ -0.52
SEC22C-202ENST00000273156 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
SEC22C-202ENST00000273156 Q6ZRN7 208 aaPredicted RBP11.79□□□□□ -0.52
SEC22C-202ENST00000273156 COX11Q9Y6N1 276 aa11.79□□□□□ -0.52
SEC22C-202ENST00000273156 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
SEC22C-202ENST00000273156 IFITM1P13164 125 aa11.78□□□□□ -0.52
SEC22C-202ENST00000273156 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
SEC22C-202ENST00000273156 MUSTN1Q8IVN3 82 aa11.78□□□□□ -0.52
SEC22C-202ENST00000273156 PGPEP1Q9NXJ5 209 aa11.78□□□□□ -0.52
SEC22C-202ENST00000273156 DYNC1H1Q14204 4646 aaKnown RBP11.78□□□□□ -0.52
SEC22C-202ENST00000273156 A0A0U1RRA0 63 aa11.77□□□□□ -0.53
SEC22C-202ENST00000273156 ZNF561-AS1K7EIQ3 104 aa11.77□□□□□ -0.53
SEC22C-202ENST00000273156 C2orf82Q6UX34 121 aa11.77□□□□□ -0.53
SEC22C-202ENST00000273156 COPS9Q8WXC6 57 aa11.77□□□□□ -0.53
SEC22C-202ENST00000273156 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
SEC22C-202ENST00000273156 LINC00158P58513 81 aa11.75□□□□□ -0.53
SEC22C-202ENST00000273156 ERG28Q9UKR5 140 aa11.75□□□□□ -0.53
SEC22C-202ENST00000273156 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
SEC22C-202ENST00000273156 DAND5Q8N907 189 aa11.74□□□□□ -0.53
SEC22C-202ENST00000273156 PFN2P35080 140 aa11.73□□□□□ -0.53
SEC22C-202ENST00000273156 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
SEC22C-202ENST00000273156 COX17Q14061 63 aa11.73□□□□□ -0.53
SEC22C-202ENST00000273156 C15orf56Q8N910 161 aa11.73□□□□□ -0.53
SEC22C-202ENST00000273156 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
SEC22C-202ENST00000273156 A4D1N5 150 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 F8WDY8 70 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 NPC2P61916 151 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 LINC00308Q8TCZ7 52 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
SEC22C-202ENST00000273156 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 TAX1BP3O14907 124 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 UNQ6190/PRO20217Q6UXQ8 127 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 C2orf48Q96LS8 159 aa11.71□□□□□ -0.53
SEC22C-202ENST00000273156 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.54
SEC22C-202ENST00000273156 PPDPFQ9H3Y8 114 aa11.71□□□□□ -0.54
SEC22C-202ENST00000273156 A0A087WTM6 91 aa11.7□□□□□ -0.54
SEC22C-202ENST00000273156 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
SEC22C-202ENST00000273156 K7ERJ3 54 aa11.69□□□□□ -0.54
SEC22C-202ENST00000273156 PSCAO43653 123 aa11.69□□□□□ -0.54
SEC22C-202ENST00000273156 RAB37Q96AX2 223 aa11.69□□□□□ -0.54
SEC22C-202ENST00000273156 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
SEC22C-202ENST00000273156 CFC1P0CG37 223 aa11.68□□□□□ -0.54
SEC22C-202ENST00000273156 C10orf25Q5T742 122 aa11.68□□□□□ -0.54
SEC22C-202ENST00000273156 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
SEC22C-202ENST00000273156 PCLOQ9Y6V0 5065 aa11.67□□□□□ -0.54
SEC22C-202ENST00000273156 A0A1B0GV90 55 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms