RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 UNQ6190/PRO20217Q6UXQ8 127 aa12.16□□□□□ -0.46
SAMD1-201ENST00000269724 LINC00310P59036 64 aa12.15□□□□□ -0.46
SAMD1-201ENST00000269724 CKS1BP61024 79 aa12.15□□□□□ -0.46
SAMD1-201ENST00000269724 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
SAMD1-201ENST00000269724 C6orf48Q9UBA6 75 aa12.15□□□□□ -0.46
SAMD1-201ENST00000269724 CXCL5P42830 114 aa12.14□□□□□ -0.47
SAMD1-201ENST00000269724 FAM19A2Q8N3H0 131 aa12.14□□□□□ -0.47
SAMD1-201ENST00000269724 TOMM7Q9P0U1 55 aa12.14□□□□□ -0.47
SAMD1-201ENST00000269724 STPG4Q8N801 248 aa12.13□□□□□ -0.47
SAMD1-201ENST00000269724 GAGE2BQ13066 116 aa12.12□□□□□ -0.47
SAMD1-201ENST00000269724 C2orf82Q6UX34 121 aa12.12□□□□□ -0.47
SAMD1-201ENST00000269724 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
SAMD1-201ENST00000269724 ABCA13Q86UQ4 5058 aa12.12□□□□□ -0.47
SAMD1-201ENST00000269724 SRRM2Q9UQ35 2752 aaKnown RBP12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 LEPROTL1O95214 131 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
SAMD1-201ENST00000269724 COX7B2Q8TF08 81 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
SAMD1-201ENST00000269724 F8VRH5 84 aa12.1□□□□□ -0.47
SAMD1-201ENST00000269724 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
SAMD1-201ENST00000269724 PCLOQ9Y6V0 5065 aa12.1□□□□□ -0.47
SAMD1-201ENST00000269724 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
SAMD1-201ENST00000269724 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
SAMD1-201ENST00000269724 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
SAMD1-201ENST00000269724 NDUFC2-KCTD14E9PQ53 114 aa12.08□□□□□ -0.48
SAMD1-201ENST00000269724 NUPR1O60356 82 aa12.08□□□□□ -0.48
SAMD1-201ENST00000269724 Q6ZRP5 223 aa12.08□□□□□ -0.48
SAMD1-201ENST00000269724 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
SAMD1-201ENST00000269724 TMEM170BQ5T4T1 132 aa12.06□□□□□ -0.48
SAMD1-201ENST00000269724 C7orf33Q8WU49 177 aa12.06□□□□□ -0.48
SAMD1-201ENST00000269724 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
SAMD1-201ENST00000269724 RPL37AP61513 92 aaKnown RBP12.05□□□□□ -0.48
SAMD1-201ENST00000269724 ODF1Q14990 250 aa12.03□□□□□ -0.48
SAMD1-201ENST00000269724 C9orf116Q5BN46 136 aaPredicted RBP12.03□□□□□ -0.48
SAMD1-201ENST00000269724 SFTA2Q6UW10 78 aa12.03□□□□□ -0.48
SAMD1-201ENST00000269724 A0A1W2PNN7 141 aa12.02□□□□□ -0.49
SAMD1-201ENST00000269724 FABP4P15090 132 aa12.02□□□□□ -0.49
SAMD1-201ENST00000269724 GAGE2EQ4V326 116 aa12.02□□□□□ -0.49
SAMD1-201ENST00000269724 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.49
SAMD1-201ENST00000269724 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.49
SAMD1-201ENST00000269724 TMEM223A0PJW6 202 aa12.01□□□□□ -0.49
SAMD1-201ENST00000269724 PLNP26678 52 aa12□□□□□ -0.49
SAMD1-201ENST00000269724 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
SAMD1-201ENST00000269724 H0Y8G0 127 aa11.99□□□□□ -0.49
SAMD1-201ENST00000269724 C9orf129Q5T035 196 aaKnown RBP11.97□□□□□ -0.49
SAMD1-201ENST00000269724 DPM2O94777 84 aa11.95□□□□□ -0.5
SAMD1-201ENST00000269724 COX17Q14061 63 aa11.95□□□□□ -0.5
SAMD1-201ENST00000269724 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
SAMD1-201ENST00000269724 FAM168BA1KXE4 195 aa11.94□□□□□ -0.5
SAMD1-201ENST00000269724 PRR3P79522 188 aaKnown RBP11.94□□□□□ -0.5
SAMD1-201ENST00000269724 ZNF625Q96I27 306 aaPredicted RBP11.94□□□□□ -0.5
SAMD1-201ENST00000269724 SYS1-DBNDD2H3BUS1 97 aa11.92□□□□□ -0.5
SAMD1-201ENST00000269724 IGKCP01834 107 aa11.92□□□□□ -0.5
SAMD1-201ENST00000269724 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
SAMD1-201ENST00000269724 XAGE1AQ9HD64 81 aa11.92□□□□□ -0.5
SAMD1-201ENST00000269724 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
SAMD1-201ENST00000269724 PHF5AQ7RTV0 110 aaKnown RBP11.91□□□□□ -0.5
SAMD1-201ENST00000269724 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
SAMD1-201ENST00000269724 MYCBP2O75592 4640 aa11.91□□□□□ -0.5
SAMD1-201ENST00000269724 M0QXV9 152 aa11.9□□□□□ -0.5
SAMD1-201ENST00000269724 HERVK_113P61574 105 aa11.9□□□□□ -0.5
SAMD1-201ENST00000269724 PET117Q6UWS5 81 aa11.9□□□□□ -0.5
SAMD1-201ENST00000269724 PLA2G2DQ9UNK4 145 aa11.9□□□□□ -0.5
SAMD1-201ENST00000269724 HERV-K104P63124 156 aa11.89□□□□□ -0.51
SAMD1-201ENST00000269724 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 LEPROTO15243 131 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 PFN2P35080 140 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 PLEKHB2Q96CS7 222 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 PMCHL2Q9BQD1 86 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 TP73-AS1Q9UF72 201 aa11.88□□□□□ -0.51
SAMD1-201ENST00000269724 LINC00587B1AMM8 73 aa11.87□□□□□ -0.51
SAMD1-201ENST00000269724 HNRNPA3P51991 378 aaKnown RBP11.87□□□□□ -0.51
SAMD1-201ENST00000269724 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
SAMD1-201ENST00000269724 LINC01545Q5VT33 79 aa11.87□□□□□ -0.51
SAMD1-201ENST00000269724 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
SAMD1-201ENST00000269724 PSORS1C2Q9UIG4 136 aa11.86□□□□□ -0.51
SAMD1-201ENST00000269724 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
SAMD1-201ENST00000269724 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
SAMD1-201ENST00000269724 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
SAMD1-201ENST00000269724 IGLV5-37A0A075B6J1 123 aa11.84□□□□□ -0.51
SAMD1-201ENST00000269724 C3orf79P0CE67 100 aa11.84□□□□□ -0.51
SAMD1-201ENST00000269724 NMUP48645 174 aa11.84□□□□□ -0.51
SAMD1-201ENST00000269724 SND1-IT1Q9HBX3 110 aa11.84□□□□□ -0.51
SAMD1-201ENST00000269724 KRTAP29-1A8MX34 341 aaPredicted RBP11.83□□□□□ -0.52
SAMD1-201ENST00000269724 J3QQQ9 107 aa11.83□□□□□ -0.52
SAMD1-201ENST00000269724 UBE2BP63146 152 aa11.83□□□□□ -0.52
SAMD1-201ENST00000269724 E9PLD3 99 aa11.82□□□□□ -0.52
SAMD1-201ENST00000269724 OXTP01178 125 aa11.82□□□□□ -0.52
SAMD1-201ENST00000269724 LINC00158P58513 81 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms