RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 A0A0J9YWU9 116 aa15.8■□□□□ 0.12
RAB40B-201ENST00000269347 ANGP03950 147 aaKnown RBP15.8■□□□□ 0.12
RAB40B-201ENST00000269347 C11orf68Q9H3H3 251 aaKnown RBP15.8■□□□□ 0.12
RAB40B-201ENST00000269347 ATXN8Q156A1 80 aa15.8■□□□□ 0.12
RAB40B-201ENST00000269347 C9JAW5 83 aa15.79■□□□□ 0.12
RAB40B-201ENST00000269347 SLC25A20O43772 301 aa15.78■□□□□ 0.12
RAB40B-201ENST00000269347 LYPD5Q6UWN5 251 aa15.78■□□□□ 0.12
RAB40B-201ENST00000269347 PPDPFLQ8WWR9 84 aa15.78■□□□□ 0.12
RAB40B-201ENST00000269347 SPATA25Q9BR10 227 aa15.78■□□□□ 0.12
RAB40B-201ENST00000269347 NANOS2P60321 138 aaKnown RBP15.77■□□□□ 0.12
RAB40B-201ENST00000269347 REG3AQ06141 175 aa15.77■□□□□ 0.12
RAB40B-201ENST00000269347 SS18Q15532 418 aa15.77■□□□□ 0.12
RAB40B-201ENST00000269347 LELP1Q5T871 98 aa15.77■□□□□ 0.12
RAB40B-201ENST00000269347 SIGMAR1Q99720 223 aa15.76■□□□□ 0.11
RAB40B-201ENST00000269347 RPL13AP40429 203 aaKnown RBP15.76■□□□□ 0.11
RAB40B-201ENST00000269347 C2orf82Q6UX34 121 aa15.76■□□□□ 0.11
RAB40B-201ENST00000269347 ANKRD29Q8N6D5 301 aa15.76■□□□□ 0.11
RAB40B-201ENST00000269347 CHCHD10Q8WYQ3 142 aaPredicted RBP15.76■□□□□ 0.11
RAB40B-201ENST00000269347 KPRPQ5T749 579 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-201ENST00000269347 CARD19Q96LW7 228 aa15.75■□□□□ 0.11
RAB40B-201ENST00000269347 COX6CP09669 75 aa15.75■□□□□ 0.11
RAB40B-201ENST00000269347 HERV-K104P63124 156 aa15.75■□□□□ 0.11
RAB40B-201ENST00000269347 LINC01620Q4KN68 170 aa15.75■□□□□ 0.11
RAB40B-201ENST00000269347 COPS9Q8WXC6 57 aa15.74■□□□□ 0.11
RAB40B-201ENST00000269347 M0QXV9 152 aa15.73■□□□□ 0.11
RAB40B-201ENST00000269347 MIR7-3HGQ8N6C7 128 aa15.73■□□□□ 0.11
RAB40B-201ENST00000269347 WFDC10BQ8IUB3 73 aa15.72■□□□□ 0.11
RAB40B-201ENST00000269347 K7EIL1 84 aa15.71■□□□□ 0.11
RAB40B-201ENST00000269347 KIAA0087Q14695 138 aa15.71■□□□□ 0.11
RAB40B-201ENST00000269347 KLK12Q9UKR0 248 aa15.71■□□□□ 0.11
RAB40B-201ENST00000269347 CD164L2Q6UWJ8 174 aa15.7■□□□□ 0.1
RAB40B-201ENST00000269347 ENHOQ6UWT2 76 aa15.7■□□□□ 0.1
RAB40B-201ENST00000269347 COL7A1Q02388 2944 aa15.69■□□□□ 0.1
RAB40B-201ENST00000269347 PFN2P35080 140 aa15.69■□□□□ 0.1
RAB40B-201ENST00000269347 C6orf226Q5I0X4 101 aa15.68■□□□□ 0.1
RAB40B-201ENST00000269347 DNAH9Q9NYC9 4486 aa15.68■□□□□ 0.1
RAB40B-201ENST00000269347 TRBV10-2A0A0K0K1G8 114 aa15.67■□□□□ 0.1
RAB40B-201ENST00000269347 MRAPQ8TCY5 172 aa15.67■□□□□ 0.1
RAB40B-201ENST00000269347 MDFIQ99750 246 aa15.67■□□□□ 0.1
RAB40B-201ENST00000269347 PRR34Q9NV39 138 aa15.67■□□□□ 0.1
RAB40B-201ENST00000269347 LINC00158P58513 81 aa15.66■□□□□ 0.1
RAB40B-201ENST00000269347 CLEC2BQ92478 149 aa15.66■□□□□ 0.1
RAB40B-201ENST00000269347 ESRGQ1W209 222 aa15.66■□□□□ 0.1
RAB40B-201ENST00000269347 Q8IZM0 81 aa15.66■□□□□ 0.1
RAB40B-201ENST00000269347 LINC00526Q96FQ7 95 aa15.66■□□□□ 0.1
RAB40B-201ENST00000269347 IGKV2-28A0A075B6P5 120 aa15.65■□□□□ 0.1
RAB40B-201ENST00000269347 IGKV2D-28P01615 120 aa15.65■□□□□ 0.1
RAB40B-201ENST00000269347 COX7A2LO14548 114 aa15.65■□□□□ 0.1
RAB40B-201ENST00000269347 CCL18P55774 89 aa15.65■□□□□ 0.1
RAB40B-201ENST00000269347 C11orf45Q8TAV5 145 aa15.65■□□□□ 0.1
RAB40B-201ENST00000269347 LYSTQ99698 3801 aa15.64■□□□□ 0.09
RAB40B-201ENST00000269347 CDIP1Q9H305 208 aa15.64■□□□□ 0.09
RAB40B-201ENST00000269347 LINC01600Q96MT4 127 aa15.63■□□□□ 0.09
RAB40B-201ENST00000269347 DEFB131BA0A096LNP1 70 aa15.63■□□□□ 0.09
RAB40B-201ENST00000269347 H3BNG1 76 aa15.63■□□□□ 0.09
RAB40B-201ENST00000269347 LST1O00453 97 aa15.63■□□□□ 0.09
RAB40B-201ENST00000269347 C9orf116Q5BN46 136 aaPredicted RBP15.63■□□□□ 0.09
RAB40B-201ENST00000269347 C6orf223Q8N319 242 aa15.63■□□□□ 0.09
RAB40B-201ENST00000269347 NTN5Q8WTR8 489 aaPredicted RBP15.63■□□□□ 0.09
RAB40B-201ENST00000269347 IBA57-AS1B1ANH7 110 aa15.62■□□□□ 0.09
RAB40B-201ENST00000269347 LINC00337Q8N6G1 96 aa15.62■□□□□ 0.09
RAB40B-201ENST00000269347 DNAH1Q9P2D7 4330 aa15.61■□□□□ 0.09
RAB40B-201ENST00000269347 SCGB1A1P11684 91 aa15.61■□□□□ 0.09
RAB40B-201ENST00000269347 PPDPFQ9H3Y8 114 aa15.61■□□□□ 0.09
RAB40B-201ENST00000269347 LINC01561Q8N1V8 128 aa15.6■□□□□ 0.09
RAB40B-201ENST00000269347 C10orf25Q5T742 122 aa15.6■□□□□ 0.09
RAB40B-201ENST00000269347 TM2D3Q9BRN9 247 aa15.6■□□□□ 0.09
RAB40B-201ENST00000269347 DEFB121Q5J5C9 76 aa15.59■□□□□ 0.09
RAB40B-201ENST00000269347 UBE2WQ96B02 151 aa15.59■□□□□ 0.09
RAB40B-201ENST00000269347 SND1-IT1Q9HBX3 110 aa15.59■□□□□ 0.09
RAB40B-201ENST00000269347 H3BT86 120 aa15.58■□□□□ 0.08
RAB40B-201ENST00000269347 MALP21145 153 aa15.58■□□□□ 0.08
RAB40B-201ENST00000269347 TEX49A0A1B0GTD5 131 aa15.55■□□□□ 0.08
RAB40B-201ENST00000269347 KRTAP26-1Q6PEX3 210 aa15.55■□□□□ 0.08
RAB40B-201ENST00000269347 CKS1BP61024 79 aa15.54■□□□□ 0.08
RAB40B-201ENST00000269347 UNQ6190/PRO20217Q6UXQ8 127 aa15.54■□□□□ 0.08
RAB40B-201ENST00000269347 Q8NDZ9 215 aa15.54■□□□□ 0.08
RAB40B-201ENST00000269347 STAB2Q8WWQ8 2551 aa15.54■□□□□ 0.08
RAB40B-201ENST00000269347 PRR3P79522 188 aaKnown RBP15.52■□□□□ 0.08
RAB40B-201ENST00000269347 TRAV13-2A0A0B4J235 113 aa15.52■□□□□ 0.07
RAB40B-201ENST00000269347 XGP55808 180 aa15.52■□□□□ 0.07
RAB40B-201ENST00000269347 CFAP161Q6P656 301 aa15.51■□□□□ 0.07
RAB40B-201ENST00000269347 CRPP02741 224 aa15.51■□□□□ 0.07
RAB40B-201ENST00000269347 MT-ATP8P03928 68 aa15.51■□□□□ 0.07
RAB40B-201ENST00000269347 SPAG11BQ08648 103 aa15.51■□□□□ 0.07
RAB40B-201ENST00000269347 FAM218AQ96MZ4 157 aa15.51■□□□□ 0.07
RAB40B-201ENST00000269347 KLK5Q9Y337 293 aaPredicted RBP15.51■□□□□ 0.07
RAB40B-201ENST00000269347 CSMD3Q7Z407 3707 aa15.48■□□□□ 0.07
RAB40B-201ENST00000269347 TRAV8-4A0A0B4J246 113 aa15.46■□□□□ 0.07
RAB40B-201ENST00000269347 SMIM11BQ8TCY0 68 aa15.45■□□□□ 0.06
RAB40B-201ENST00000269347 CXCL5P42830 114 aa15.44■□□□□ 0.06
RAB40B-201ENST00000269347 RPL28P46779 137 aaKnown RBP15.44■□□□□ 0.06
RAB40B-201ENST00000269347 DNAH10Q8IVF4 4471 aa15.44■□□□□ 0.06
RAB40B-201ENST00000269347 HIGD2BQ4VC39 106 aa15.43■□□□□ 0.06
RAB40B-201ENST00000269347 TRACP01848 142 aa15.43■□□□□ 0.06
RAB40B-201ENST00000269347 LINC00588Q9Y4M8 146 aa15.43■□□□□ 0.06
RAB40B-201ENST00000269347 DNAH7Q8WXX0 4024 aa15.43■□□□□ 0.06
RAB40B-201ENST00000269347 DNHD1Q96M86 4753 aa15.42■□□□□ 0.06
RAB40B-201ENST00000269347 TRAV10A0A0B4J240 114 aa15.42■□□□□ 0.06
RAB40B-201ENST00000269347 LINC01556Q5JQF7 62 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms