RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 LELP1Q5T871 98 aa14.17□□□□□ -0.14
LYSMD2-201ENST00000267838 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
LYSMD2-201ENST00000267838 COX6CP09669 75 aa14.16□□□□□ -0.14
LYSMD2-201ENST00000267838 TENM3Q9P273 2699 aa14.15□□□□□ -0.14
LYSMD2-201ENST00000267838 DEFB131BA0A096LNP1 70 aa14.14□□□□□ -0.15
LYSMD2-201ENST00000267838 TRIAP1O43715 76 aa14.14□□□□□ -0.15
LYSMD2-201ENST00000267838 CIRBPQ14011 172 aaKnown RBP14.14□□□□□ -0.15
LYSMD2-201ENST00000267838 ADAMTSL4-AS1Q5T5F5 129 aa14.14□□□□□ -0.15
LYSMD2-201ENST00000267838 COPS9Q8WXC6 57 aa14.14□□□□□ -0.15
LYSMD2-201ENST00000267838 TRBV10-2A0A0K0K1G8 114 aa14.13□□□□□ -0.15
LYSMD2-201ENST00000267838 LYPD5Q6UWN5 251 aa14.13□□□□□ -0.15
LYSMD2-201ENST00000267838 LINC00959A0A1B0GUT2 108 aa14.11□□□□□ -0.15
LYSMD2-201ENST00000267838 IGLV5-39A0A0G2JS06 123 aa14.11□□□□□ -0.15
LYSMD2-201ENST00000267838 SMIM1B2RUZ4 78 aa14.1□□□□□ -0.15
LYSMD2-201ENST00000267838 RPL13AP40429 203 aaKnown RBP14.09□□□□□ -0.15
LYSMD2-201ENST00000267838 Q8N3U1 123 aa14.09□□□□□ -0.15
LYSMD2-201ENST00000267838 H3BT86 120 aa14.08□□□□□ -0.16
LYSMD2-201ENST00000267838 XGP55808 180 aa14.08□□□□□ -0.16
LYSMD2-201ENST00000267838 SS18Q15532 418 aa14.08□□□□□ -0.16
LYSMD2-201ENST00000267838 CLPSL2Q6UWE3 100 aa14.08□□□□□ -0.16
LYSMD2-201ENST00000267838 TRAV10A0A0B4J240 114 aa14.07□□□□□ -0.16
LYSMD2-201ENST00000267838 MT-ATP8P03928 68 aa14.07□□□□□ -0.16
LYSMD2-201ENST00000267838 ANGP03950 147 aaKnown RBP14.07□□□□□ -0.16
LYSMD2-201ENST00000267838 LINC00269Q8N2A0 174 aa14.07□□□□□ -0.16
LYSMD2-201ENST00000267838 IGHV3OR16-9A0A0B4J2B5 98 aa14.06□□□□□ -0.16
LYSMD2-201ENST00000267838 NTN5Q8WTR8 489 aaPredicted RBP14.06□□□□□ -0.16
LYSMD2-201ENST00000267838 CKS1BP61024 79 aa14.06□□□□□ -0.16
LYSMD2-201ENST00000267838 NPC2P61916 151 aa14.05□□□□□ -0.16
LYSMD2-201ENST00000267838 UBE2WQ96B02 151 aa14.05□□□□□ -0.16
LYSMD2-201ENST00000267838 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 PPDPFQ9H3Y8 114 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 Q9H8V8 135 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 LST1O00453 97 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 HERV-K104P63124 156 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 REG3AQ06141 175 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 C2orf82Q6UX34 121 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 B9D2Q9BPU9 175 aa14.04□□□□□ -0.16
LYSMD2-201ENST00000267838 A0A087WZ39 114 aa14.03□□□□□ -0.16
LYSMD2-201ENST00000267838 XCL1P47992 114 aa14.03□□□□□ -0.16
LYSMD2-201ENST00000267838 LINC00308Q8TCZ7 52 aa14.03□□□□□ -0.16
LYSMD2-201ENST00000267838 ESRGQ1W209 222 aa14.02□□□□□ -0.16
LYSMD2-201ENST00000267838 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
LYSMD2-201ENST00000267838 TRAV8-4A0A0B4J246 113 aa14□□□□□ -0.17
LYSMD2-201ENST00000267838 WFDC10BQ8IUB3 73 aa14□□□□□ -0.17
LYSMD2-201ENST00000267838 C15orf53Q8NAA6 179 aa13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 DAND5Q8N907 189 aa13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 COX7B2Q8TF08 81 aa13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 CHCHD10Q8WYQ3 142 aaPredicted RBP13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 ZNF625Q96I27 306 aaPredicted RBP13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 KLK12Q9UKR0 248 aa13.99□□□□□ -0.17
LYSMD2-201ENST00000267838 PRR34Q9NV39 138 aa13.98□□□□□ -0.17
LYSMD2-201ENST00000267838 MEIG1Q5JSS6 88 aa13.97□□□□□ -0.17
LYSMD2-201ENST00000267838 CD164L2Q6UWJ8 174 aa13.97□□□□□ -0.17
LYSMD2-201ENST00000267838 CLEC2BQ92478 149 aa13.97□□□□□ -0.17
LYSMD2-201ENST00000267838 IGLV10-54A0A075B6I4 117 aa13.96□□□□□ -0.17
LYSMD2-201ENST00000267838 TEX49A0A1B0GTD5 131 aa13.96□□□□□ -0.17
LYSMD2-201ENST00000267838 SNCGO76070 127 aa13.96□□□□□ -0.18
LYSMD2-201ENST00000267838 LINC01561Q8N1V8 128 aa13.96□□□□□ -0.18
LYSMD2-201ENST00000267838 TOMM7Q9P0U1 55 aa13.96□□□□□ -0.18
LYSMD2-201ENST00000267838 COX7A2LO14548 114 aa13.94□□□□□ -0.18
LYSMD2-201ENST00000267838 ENHOQ6UWT2 76 aa13.94□□□□□ -0.18
LYSMD2-201ENST00000267838 FAM240AA0A1B0GVK7 77 aa13.93□□□□□ -0.18
LYSMD2-201ENST00000267838 CRPP02741 224 aa13.92□□□□□ -0.18
LYSMD2-201ENST00000267838 Q6Q795 121 aa13.91□□□□□ -0.18
LYSMD2-201ENST00000267838 DNAH9Q9NYC9 4486 aa13.9□□□□□ -0.18
LYSMD2-201ENST00000267838 SOSTDC1Q6X4U4 206 aa13.9□□□□□ -0.18
LYSMD2-201ENST00000267838 NHLRC4P0CG21 123 aaPredicted RBP13.89□□□□□ -0.19
LYSMD2-201ENST00000267838 LINC01556Q5JQF7 62 aa13.89□□□□□ -0.19
LYSMD2-201ENST00000267838 A0A0U1RRA0 63 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 GAGE2BQ13066 116 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 GAGE2EQ4V326 116 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 Q8IZM0 81 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 GAGE2DQ9UEU5 116 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 TRACP01848 142 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 MALP21145 153 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 C6orf226Q5I0X4 101 aa13.88□□□□□ -0.19
LYSMD2-201ENST00000267838 TRAV13-2A0A0B4J235 113 aa13.87□□□□□ -0.19
LYSMD2-201ENST00000267838 LINC00588Q9Y4M8 146 aa13.87□□□□□ -0.19
LYSMD2-201ENST00000267838 ANAPC13Q9BS18 74 aa13.86□□□□□ -0.19
LYSMD2-201ENST00000267838 CCL18P55774 89 aa13.86□□□□□ -0.19
LYSMD2-201ENST00000267838 DNAH10OSP0CZ25 163 aa13.85□□□□□ -0.19
LYSMD2-201ENST00000267838 ACYP1P07311 99 aa13.83□□□□□ -0.19
LYSMD2-201ENST00000267838 KIAA0087Q14695 138 aa13.83□□□□□ -0.2
LYSMD2-201ENST00000267838 CFAP161Q6P656 301 aa13.81□□□□□ -0.2
LYSMD2-201ENST00000267838 KLK5Q9Y337 293 aaPredicted RBP13.81□□□□□ -0.2
LYSMD2-201ENST00000267838 COL7A1Q02388 2944 aa13.81□□□□□ -0.2
LYSMD2-201ENST00000267838 RPL28P46779 137 aaKnown RBP13.81□□□□□ -0.2
LYSMD2-201ENST00000267838 MEGF8Q7Z7M0 2845 aa13.8□□□□□ -0.2
LYSMD2-201ENST00000267838 PRKDCP78527 4128 aaKnown RBP13.8□□□□□ -0.2
LYSMD2-201ENST00000267838 IBA57-AS1B1ANH7 110 aa13.8□□□□□ -0.2
LYSMD2-201ENST00000267838 CXCL5P42830 114 aa13.8□□□□□ -0.2
LYSMD2-201ENST00000267838 TTC32Q5I0X7 151 aa13.79□□□□□ -0.2
LYSMD2-201ENST00000267838 KRTAP26-1Q6PEX3 210 aa13.79□□□□□ -0.2
LYSMD2-201ENST00000267838 MIR7-3HGQ8N6C7 128 aa13.79□□□□□ -0.2
LYSMD2-201ENST00000267838 UPK3BQ9BT76 320 aa13.78□□□□□ -0.2
LYSMD2-201ENST00000267838 LINC00158P58513 81 aa13.78□□□□□ -0.2
LYSMD2-201ENST00000267838 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
LYSMD2-201ENST00000267838 NDUFV3P56181 108 aaKnown RBP13.77□□□□□ -0.21
LYSMD2-201ENST00000267838 SPAG11BQ08648 103 aa13.77□□□□□ -0.21
LYSMD2-201ENST00000267838 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms