RNA–Protein interactions for RNA: ENST00000265164.6

CASP6-201, Transcript of caspase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP6, Length 1,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-201ENST00000265164 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
CASP6-201ENST00000265164 TSPEAR-AS2P59090 65 aa13.11□□□□□ -0.31
CASP6-201ENST00000265164 PCP2Q8IVA1 136 aa13.11□□□□□ -0.31
CASP6-201ENST00000265164 TTTY13Q9BZ97 58 aa13.1□□□□□ -0.31
CASP6-201ENST00000265164 TSTD3H0UI37 97 aa13.09□□□□□ -0.31
CASP6-201ENST00000265164 COX7B2Q8TF08 81 aa13.09□□□□□ -0.31
CASP6-201ENST00000265164 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
CASP6-201ENST00000265164 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
CASP6-201ENST00000265164 SLC25A34Q6PIV7 304 aa13.08□□□□□ -0.31
CASP6-201ENST00000265164 A0A087WTM6 91 aa13.08□□□□□ -0.32
CASP6-201ENST00000265164 BOD1L2Q8IYS8 172 aa13.08□□□□□ -0.32
CASP6-201ENST00000265164 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
CASP6-201ENST00000265164 ZNF815PA8K554 130 aa13.07□□□□□ -0.32
CASP6-201ENST00000265164 PRSS2P07478 247 aa13.07□□□□□ -0.32
CASP6-201ENST00000265164 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
CASP6-201ENST00000265164 UQCR10Q9UDW1 63 aa13.07□□□□□ -0.32
CASP6-201ENST00000265164 DLEU1O43261 78 aa13.06□□□□□ -0.32
CASP6-201ENST00000265164 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
CASP6-201ENST00000265164 Q8IZM0 81 aa13.06□□□□□ -0.32
CASP6-201ENST00000265164 NDUFA12Q9UI09 145 aa13.06□□□□□ -0.32
CASP6-201ENST00000265164 MIEN1Q9BRT3 115 aa13.05□□□□□ -0.32
CASP6-201ENST00000265164 PGPEP1Q9NXJ5 209 aa13.05□□□□□ -0.32
CASP6-201ENST00000265164 EREGO14944 169 aa13.04□□□□□ -0.32
CASP6-201ENST00000265164 PSCAO43653 123 aa13.04□□□□□ -0.32
CASP6-201ENST00000265164 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 KIAA0087Q14695 138 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 Q8N1X5 172 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 NDUFA1O15239 70 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 C15orf56Q8N910 161 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
CASP6-201ENST00000265164 FAT1Q14517 4588 aa13.02□□□□□ -0.33
CASP6-201ENST00000265164 CKS1BP61024 79 aa13.01□□□□□ -0.33
CASP6-201ENST00000265164 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
CASP6-201ENST00000265164 USP17L23D6RBM5 183 aa13□□□□□ -0.33
CASP6-201ENST00000265164 ZNF561-AS1K7EIQ3 104 aa13□□□□□ -0.33
CASP6-201ENST00000265164 CXCL5P42830 114 aa13□□□□□ -0.33
CASP6-201ENST00000265164 HIGD2BQ4VC39 106 aa13□□□□□ -0.33
CASP6-201ENST00000265164 SFTA2Q6UW10 78 aa13□□□□□ -0.33
CASP6-201ENST00000265164 SCGB1D4Q6XE38 83 aa13□□□□□ -0.33
CASP6-201ENST00000265164 GVQW2A0A096LPI5 108 aaPredicted RBP12.99□□□□□ -0.33
CASP6-201ENST00000265164 LRCOL1A6NCL2 159 aa12.99□□□□□ -0.33
CASP6-201ENST00000265164 HERV-K104P63124 156 aa12.99□□□□□ -0.33
CASP6-201ENST00000265164 KRTAP10-1P60331 282 aa12.98□□□□□ -0.33
CASP6-201ENST00000265164 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
CASP6-201ENST00000265164 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
CASP6-201ENST00000265164 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
CASP6-201ENST00000265164 A0A0J9YXY3 114 aa12.97□□□□□ -0.33
CASP6-201ENST00000265164 LECT2O14960 151 aa12.97□□□□□ -0.33
CASP6-201ENST00000265164 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
CASP6-201ENST00000265164 XGP55808 180 aa12.97□□□□□ -0.33
CASP6-201ENST00000265164 C2orf91Q6ZV80 131 aa12.96□□□□□ -0.33
CASP6-201ENST00000265164 C2orf48Q96LS8 159 aa12.96□□□□□ -0.33
CASP6-201ENST00000265164 DNAH8Q96JB1 4490 aa12.96□□□□□ -0.33
CASP6-201ENST00000265164 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
CASP6-201ENST00000265164 F8WDY8 70 aa12.95□□□□□ -0.34
CASP6-201ENST00000265164 DDTP30046 118 aa12.95□□□□□ -0.34
CASP6-201ENST00000265164 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
CASP6-201ENST00000265164 WFDC2Q14508 124 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 UNQ6190/PRO20217Q6UXQ8 127 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 CAMK2N2Q96S95 79 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 VPS13BQ7Z7G8 4022 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
CASP6-201ENST00000265164 LINC00587B1AMM8 73 aa12.92□□□□□ -0.34
CASP6-201ENST00000265164 GCSHP23434 173 aa12.92□□□□□ -0.34
CASP6-201ENST00000265164 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
CASP6-201ENST00000265164 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
CASP6-201ENST00000265164 Q8N814 137 aa12.92□□□□□ -0.34
CASP6-201ENST00000265164 TIMM17BO60830 172 aa12.91□□□□□ -0.34
CASP6-201ENST00000265164 IGLV5-52A0A0A0MRZ9 124 aa12.9□□□□□ -0.34
CASP6-201ENST00000265164 TMEM238C9JI98 176 aa12.89□□□□□ -0.35
CASP6-201ENST00000265164 HAMPP81172 84 aa12.89□□□□□ -0.35
CASP6-201ENST00000265164 SYCNQ0VAF6 134 aa12.89□□□□□ -0.35
CASP6-201ENST00000265164 Q6ZRU5 148 aa12.89□□□□□ -0.35
CASP6-201ENST00000265164 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
CASP6-201ENST00000265164 CTAG1AP78358 180 aa12.88□□□□□ -0.35
CASP6-201ENST00000265164 LITAFQ99732 161 aa12.88□□□□□ -0.35
CASP6-201ENST00000265164 TRBV30A0A0K0K1B3 111 aa12.88□□□□□ -0.35
CASP6-201ENST00000265164 SMIM13P0DJ93 91 aa12.88□□□□□ -0.35
CASP6-201ENST00000265164 SRSF9Q13242 221 aaKnown RBP eCLIP12.88□□□□□ -0.35
CASP6-201ENST00000265164 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
CASP6-201ENST00000265164 C6orf48Q9UBA6 75 aa12.88□□□□□ -0.35
CASP6-201ENST00000265164 A0A0U1RRA0 63 aa12.87□□□□□ -0.35
CASP6-201ENST00000265164 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
CASP6-201ENST00000265164 LINC00158P58513 81 aa12.87□□□□□ -0.35
CASP6-201ENST00000265164 SLPIP03973 132 aa12.86□□□□□ -0.35
CASP6-201ENST00000265164 PFN2P35080 140 aa12.86□□□□□ -0.35
CASP6-201ENST00000265164 COX17Q14061 63 aa12.86□□□□□ -0.35
CASP6-201ENST00000265164 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
CASP6-201ENST00000265164 ADAMTSL4-AS1Q5T5F5 129 aa12.86□□□□□ -0.35
CASP6-201ENST00000265164 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
CASP6-201ENST00000265164 HSD52Q0P140 79 aa12.85□□□□□ -0.35
CASP6-201ENST00000265164 TAL2Q16559 108 aa12.85□□□□□ -0.35
CASP6-201ENST00000265164 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
CASP6-201ENST00000265164 Q6ZVH6 145 aa12.84□□□□□ -0.35
CASP6-201ENST00000265164 SPANXDQ9BXN6 97 aa12.84□□□□□ -0.35
CASP6-201ENST00000265164 SPANXCQ9NY87 97 aa12.84□□□□□ -0.35
CASP6-201ENST00000265164 SMR3BP02814 79 aaPredicted RBP12.83□□□□□ -0.35
CASP6-201ENST00000265164 RNF151Q2KHN1 245 aa12.83□□□□□ -0.35
CASP6-201ENST00000265164 Q5VSD8 79 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms