RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 MAP6D1Q9H9H5 199 aa11.62□□□□□ -0.55
GPC1-201ENST00000264039 CCKP06307 115 aa11.61□□□□□ -0.55
GPC1-201ENST00000264039 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
GPC1-201ENST00000264039 PRORYQ9H606 182 aa11.61□□□□□ -0.55
GPC1-201ENST00000264039 IGLV5-39A0A0G2JS06 123 aa11.6□□□□□ -0.55
GPC1-201ENST00000264039 LINC00336Q6ZUF6 198 aa11.6□□□□□ -0.55
GPC1-201ENST00000264039 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
GPC1-201ENST00000264039 AVPP01185 164 aa11.6□□□□□ -0.55
GPC1-201ENST00000264039 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 GNLYP22749 145 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 C9orf116Q5BN46 136 aaPredicted RBP11.59□□□□□ -0.55
GPC1-201ENST00000264039 IGLV1-40P01703 118 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
GPC1-201ENST00000264039 PLA2G2AP14555 144 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
GPC1-201ENST00000264039 J3QLI3 93 aa11.58□□□□□ -0.56
GPC1-201ENST00000264039 NTM-AS1Q6ZSK4 140 aa11.58□□□□□ -0.56
GPC1-201ENST00000264039 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
GPC1-201ENST00000264039 OXTP01178 125 aa11.57□□□□□ -0.56
GPC1-201ENST00000264039 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
GPC1-201ENST00000264039 GCN1Q92616 2671 aaKnown RBP11.56□□□□□ -0.56
GPC1-201ENST00000264039 FBXL19-AS1Q494R0 122 aa11.56□□□□□ -0.56
GPC1-201ENST00000264039 WFDC10AQ9H1F0 79 aa11.55□□□□□ -0.56
GPC1-201ENST00000264039 Q6ZQY7 126 aa11.55□□□□□ -0.56
GPC1-201ENST00000264039 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
GPC1-201ENST00000264039 UCNP55089 124 aa11.54□□□□□ -0.56
GPC1-201ENST00000264039 GYPEP15421 78 aa11.53□□□□□ -0.56
GPC1-201ENST00000264039 PRR4Q16378 134 aa11.53□□□□□ -0.56
GPC1-201ENST00000264039 Q8N3U1 123 aa11.53□□□□□ -0.56
GPC1-201ENST00000264039 LINC00474Q9P2X8 69 aa11.53□□□□□ -0.56
GPC1-201ENST00000264039 TRBV10-1A0A0K0K1A3 114 aa11.52□□□□□ -0.56
GPC1-201ENST00000264039 TMEM89A2RUT3 159 aa11.52□□□□□ -0.56
GPC1-201ENST00000264039 Q8N814 137 aa11.52□□□□□ -0.56
GPC1-201ENST00000264039 SERP1Q9Y6X1 66 aa11.52□□□□□ -0.56
GPC1-201ENST00000264039 TRBV6-4A0A1B0GX49 114 aa11.52□□□□□ -0.57
GPC1-201ENST00000264039 BEAN1Q3B7T3 259 aa11.52□□□□□ -0.57
GPC1-201ENST00000264039 Q8N9L7 120 aa11.52□□□□□ -0.57
GPC1-201ENST00000264039 PRO0628Q9UI54 55 aa11.52□□□□□ -0.57
GPC1-201ENST00000264039 SMIM26A0A096LP01 95 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 TRAV10A0A0B4J240 114 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 NDUFC2-KCTD14E9PQ53 114 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 DEFB4AO15263 64 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 ZANQ9Y493 2812 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 IGLV5-45A0A087WSX0 123 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 C1orf195Q5TG92 126 aa11.51□□□□□ -0.57
GPC1-201ENST00000264039 ATP5EP2Q5VTU8 51 aa11.5□□□□□ -0.57
GPC1-201ENST00000264039 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
GPC1-201ENST00000264039 V9GYY9 64 aa11.5□□□□□ -0.57
GPC1-201ENST00000264039 C11orf72Q8NBR9 251 aa11.5□□□□□ -0.57
GPC1-201ENST00000264039 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
GPC1-201ENST00000264039 TRAV7A0A075B6U4 112 aa11.49□□□□□ -0.57
GPC1-201ENST00000264039 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
GPC1-201ENST00000264039 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
GPC1-201ENST00000264039 TRBV7-6A0A0J9YX20 115 aa11.46□□□□□ -0.57
GPC1-201ENST00000264039 LINC01547P58512 204 aaPredicted RBP11.46□□□□□ -0.57
GPC1-201ENST00000264039 HRNRQ86YZ3 2850 aaPredicted RBP11.46□□□□□ -0.58
GPC1-201ENST00000264039 LINC00959A0A1B0GUT2 108 aa11.46□□□□□ -0.58
GPC1-201ENST00000264039 C3orf84H3BNL1 204 aa11.46□□□□□ -0.58
GPC1-201ENST00000264039 MIFP14174 115 aa11.46□□□□□ -0.58
GPC1-201ENST00000264039 C22orf24Q9Y442 160 aa11.46□□□□□ -0.58
GPC1-201ENST00000264039 DEFB114Q30KQ6 69 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 C1orf158Q8N1D5 194 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 Q6ZVQ6 151 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 NREPQ16612 68 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 Q5XG85 94 aa11.45□□□□□ -0.58
GPC1-201ENST00000264039 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
GPC1-201ENST00000264039 LINC01356Q8N9X3 169 aa11.43□□□□□ -0.58
GPC1-201ENST00000264039 A0A087WZ39 114 aa11.42□□□□□ -0.58
GPC1-201ENST00000264039 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
GPC1-201ENST00000264039 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
GPC1-201ENST00000264039 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
GPC1-201ENST00000264039 NANOS2P60321 138 aaKnown RBP11.41□□□□□ -0.58
GPC1-201ENST00000264039 CRYBG3Q68DQ2 2970 aa11.4□□□□□ -0.58
GPC1-201ENST00000264039 SPAG11BQ08648 103 aa11.4□□□□□ -0.58
GPC1-201ENST00000264039 FBN2P35556 2912 aa11.39□□□□□ -0.59
GPC1-201ENST00000264039 M0R2N4 97 aa11.39□□□□□ -0.59
GPC1-201ENST00000264039 CR1P17927 2039 aa11.39□□□□□ -0.59
GPC1-201ENST00000264039 H7BZZ5 65 aa11.39□□□□□ -0.59
GPC1-201ENST00000264039 CCL24O00175 119 aa11.39□□□□□ -0.59
GPC1-201ENST00000264039 BPY2O14599 106 aa11.38□□□□□ -0.59
GPC1-201ENST00000264039 CHCHD10Q8WYQ3 142 aaPredicted RBP11.38□□□□□ -0.59
GPC1-201ENST00000264039 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
GPC1-201ENST00000264039 C16orf74Q96GX8 76 aa11.37□□□□□ -0.59
GPC1-201ENST00000264039 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
GPC1-201ENST00000264039 KLK9Q2XQG4 91 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 DIRC1Q969H9 104 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 KLK12Q9UKR0 248 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 PSPHP1O15172 72 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
GPC1-201ENST00000264039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
GPC1-201ENST00000264039 FLNCQ14315 2725 aa11.35□□□□□ -0.59
GPC1-201ENST00000264039 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
GPC1-201ENST00000264039 WIPF1O43516 503 aa11.34□□□□□ -0.59
GPC1-201ENST00000264039 NF1P21359 2839 aa11.34□□□□□ -0.59
GPC1-201ENST00000264039 TEX15Q9BXT5 2789 aa11.34□□□□□ -0.59
GPC1-201ENST00000264039 SEC61GP60059 68 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms