RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 C9JAW5 83 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 LINC00158P58513 81 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 REG3AQ06141 175 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 MIR7-3HGQ8N6C7 128 aa8.89□□□□□ -0.99
SPTLC1-201ENST00000262554 Q8IZM0 81 aa8.88□□□□□ -0.99
SPTLC1-201ENST00000262554 COX7A2LO14548 114 aa8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 FLNBO75369 2602 aaKnown RBP8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 SLC25A20O43772 301 aa8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 LINC01620Q4KN68 170 aa8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 TEN1Q86WV5 123 aa8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 Q8N3U1 123 aa8.87□□□□□ -0.99
SPTLC1-201ENST00000262554 TRRAPQ9Y4A5 3859 aa8.86□□□□□ -0.99
SPTLC1-201ENST00000262554 M0QXV9 152 aa8.86□□□□□ -0.99
SPTLC1-201ENST00000262554 C11orf68Q9H3H3 251 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-201ENST00000262554 H3BNG1 76 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 FOXI1Q12951 378 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 MALP21145 153 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 PFN2P35080 140 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 SND1-IT1Q9HBX3 110 aa8.85□□□□□ -0.99
SPTLC1-201ENST00000262554 TRAV13-2A0A0B4J235 113 aa8.84□□□□□ -0.99
SPTLC1-201ENST00000262554 CKS1BP61024 79 aa8.84□□□□□ -0.99
SPTLC1-201ENST00000262554 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
SPTLC1-201ENST00000262554 PPDPFLQ8WWR9 84 aa8.84□□□□□ -0.99
SPTLC1-201ENST00000262554 CXCL5P42830 114 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 ANKRD29Q8N6D5 301 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 CLEC2BQ92478 149 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 LST1O00453 97 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 CRPP02741 224 aa8.83□□□□□ -1
SPTLC1-201ENST00000262554 CCL18P55774 89 aa8.82□□□□□ -1
SPTLC1-201ENST00000262554 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
SPTLC1-201ENST00000262554 C2orf82Q6UX34 121 aa8.82□□□□□ -1
SPTLC1-201ENST00000262554 Q6ZTC4 211 aa8.82□□□□□ -1
SPTLC1-201ENST00000262554 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
SPTLC1-201ENST00000262554 LINC01600Q96MT4 127 aa8.81□□□□□ -1
SPTLC1-201ENST00000262554 PRR34Q9NV39 138 aa8.81□□□□□ -1
SPTLC1-201ENST00000262554 KLK12Q9UKR0 248 aa8.81□□□□□ -1
SPTLC1-201ENST00000262554 A0A0J9YWU9 116 aa8.81□□□□□ -1
SPTLC1-201ENST00000262554 KIAA0087Q14695 138 aa8.81□□□□□ -1
SPTLC1-201ENST00000262554 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
SPTLC1-201ENST00000262554 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
SPTLC1-201ENST00000262554 IGKV2D-28P01615 120 aa8.8□□□□□ -1
SPTLC1-201ENST00000262554 CARD19Q96LW7 228 aa8.8□□□□□ -1
SPTLC1-201ENST00000262554 COX17Q14061 63 aa8.79□□□□□ -1
SPTLC1-201ENST00000262554 LINC00337Q8N6G1 96 aa8.79□□□□□ -1
SPTLC1-201ENST00000262554 H3BT86 120 aa8.79□□□□□ -1
SPTLC1-201ENST00000262554 PCP4P48539 62 aa8.79□□□□□ -1
SPTLC1-201ENST00000262554 C11orf45Q8TAV5 145 aa8.79□□□□□ -1
SPTLC1-201ENST00000262554 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
SPTLC1-201ENST00000262554 RPL28P46779 137 aaKnown RBP8.78□□□□□ -1
SPTLC1-201ENST00000262554 ENHOQ6UWT2 76 aa8.78□□□□□ -1
SPTLC1-201ENST00000262554 STAB1Q9NY15 2570 aa8.78□□□□□ -1
SPTLC1-201ENST00000262554 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 NANOS2P60321 138 aaKnown RBP8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 SPATA25Q9BR10 227 aa8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 DEFB131BA0A096LNP1 70 aa8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 CYSRT1A8MQ03 144 aa8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1-201ENST00000262554 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
SPTLC1-201ENST00000262554 WFDC10BQ8IUB3 73 aa8.76□□□□□ -1.01
SPTLC1-201ENST00000262554 UBE2WQ96B02 151 aa8.76□□□□□ -1.01
SPTLC1-201ENST00000262554 TRACP01848 142 aa8.74□□□□□ -1.01
SPTLC1-201ENST00000262554 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
SPTLC1-201ENST00000262554 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
SPTLC1-201ENST00000262554 SIGMAR1Q99720 223 aa8.74□□□□□ -1.01
SPTLC1-201ENST00000262554 PKD1L1Q8TDX9 2849 aa8.73□□□□□ -1.01
SPTLC1-201ENST00000262554 ESRGQ1W209 222 aa8.73□□□□□ -1.01
SPTLC1-201ENST00000262554 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 MUC7Q8TAX7 377 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 MAST4O15021 2626 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 NDUFC2O95298 119 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 C6orf223Q8N319 242 aa8.72□□□□□ -1.01
SPTLC1-201ENST00000262554 H0YGX0 51 aa8.71□□□□□ -1.01
SPTLC1-201ENST00000262554 PRB2P02812 416 aaPredicted RBP8.71□□□□□ -1.01
SPTLC1-201ENST00000262554 FAM218AQ96MZ4 157 aa8.71□□□□□ -1.01
SPTLC1-201ENST00000262554 C10orf25Q5T742 122 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 TRAV10A0A0B4J240 114 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 DEFB121Q5J5C9 76 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 LINC00526Q96FQ7 95 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 TM2D3Q9BRN9 247 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
SPTLC1-201ENST00000262554 BAHCC1Q9P281 2608 aa8.69□□□□□ -1.02
SPTLC1-201ENST00000262554 K7EIL1 84 aa8.69□□□□□ -1.02
SPTLC1-201ENST00000262554 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
SPTLC1-201ENST00000262554 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 DNAL4O96015 105 aa8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 BAALC-AS2P0C853 105 aa8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 C21orf62-AS1Q17RA5 79 aa8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
SPTLC1-201ENST00000262554 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
SPTLC1-201ENST00000262554 TMEM126AQ9H061 195 aa8.67□□□□□ -1.02
SPTLC1-201ENST00000262554 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
SPTLC1-201ENST00000262554 KRTAP26-1Q6PEX3 210 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms