RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
VPS25-201ENST00000253794 C16orf90A8MZG2 172 aa9.1□□□□□ -0.95
VPS25-201ENST00000253794 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
VPS25-201ENST00000253794 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
VPS25-201ENST00000253794 TOMM7Q9P0U1 55 aa9.09□□□□□ -0.95
VPS25-201ENST00000253794 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
VPS25-201ENST00000253794 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 CKS1BP61024 79 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 SDIM1Q6ZPB5 146 aa9.08□□□□□ -0.96
VPS25-201ENST00000253794 TMA7Q9Y2S6 64 aaKnown RBP9.08□□□□□ -0.96
VPS25-201ENST00000253794 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
VPS25-201ENST00000253794 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 HERVK_113P61574 105 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 C2orf82Q6UX34 121 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 Q6ZSA8 131 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
VPS25-201ENST00000253794 E9PLD3 99 aa9.06□□□□□ -0.96
VPS25-201ENST00000253794 LEPROTO15243 131 aa9.06□□□□□ -0.96
VPS25-201ENST00000253794 ZNF625Q96I27 306 aaPredicted RBP9.06□□□□□ -0.96
VPS25-201ENST00000253794 CIRBPQ14011 172 aaKnown RBP9.05□□□□□ -0.96
VPS25-201ENST00000253794 LINC01620Q4KN68 170 aa9.05□□□□□ -0.96
VPS25-201ENST00000253794 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
VPS25-201ENST00000253794 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
VPS25-201ENST00000253794 TSPEAR-AS2P59090 65 aa9.03□□□□□ -0.96
VPS25-201ENST00000253794 J3QQQ9 107 aa9.02□□□□□ -0.97
VPS25-201ENST00000253794 NMUP48645 174 aa9.02□□□□□ -0.97
VPS25-201ENST00000253794 STPG4Q8N801 248 aa9.02□□□□□ -0.97
VPS25-201ENST00000253794 NDUFC2-KCTD14E9PQ53 114 aa9.01□□□□□ -0.97
VPS25-201ENST00000253794 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
VPS25-201ENST00000253794 FAM30AQ9NZY2 134 aa9.01□□□□□ -0.97
VPS25-201ENST00000253794 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
VPS25-201ENST00000253794 A0A096LNI7 61 aa9□□□□□ -0.97
VPS25-201ENST00000253794 PTTG1IPP53801 180 aa9□□□□□ -0.97
VPS25-201ENST00000253794 HERV-K104P63124 156 aa9□□□□□ -0.97
VPS25-201ENST00000253794 COX17Q14061 63 aa9□□□□□ -0.97
VPS25-201ENST00000253794 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
VPS25-201ENST00000253794 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
VPS25-201ENST00000253794 ATOH7Q8N100 152 aa9□□□□□ -0.97
VPS25-201ENST00000253794 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
VPS25-201ENST00000253794 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
VPS25-201ENST00000253794 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
VPS25-201ENST00000253794 Q6ZRP5 223 aa8.99□□□□□ -0.97
VPS25-201ENST00000253794 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
VPS25-201ENST00000253794 RYR1P21817 5038 aa8.99□□□□□ -0.97
VPS25-201ENST00000253794 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 PANO1I0J062 215 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
VPS25-201ENST00000253794 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 ERG28Q9UKR5 140 aa8.98□□□□□ -0.97
VPS25-201ENST00000253794 HSPG2P98160 4391 aa8.97□□□□□ -0.97
VPS25-201ENST00000253794 XGP55808 180 aa8.97□□□□□ -0.97
VPS25-201ENST00000253794 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
VPS25-201ENST00000253794 LINC00587B1AMM8 73 aa8.96□□□□□ -0.98
VPS25-201ENST00000253794 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
VPS25-201ENST00000253794 KIAA1109Q2LD37 5005 aa8.95□□□□□ -0.98
VPS25-201ENST00000253794 GAGE2BQ13066 116 aa8.95□□□□□ -0.98
VPS25-201ENST00000253794 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
VPS25-201ENST00000253794 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 HSBP1L1C9JCN9 74 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 MAJINQ3KP22 176 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 PYY3Q5JQD4 70 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
VPS25-201ENST00000253794 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
VPS25-201ENST00000253794 A0A087WYN8 130 aa8.92□□□□□ -0.98
VPS25-201ENST00000253794 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
VPS25-201ENST00000253794 PFN2P35080 140 aa8.92□□□□□ -0.98
VPS25-201ENST00000253794 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
VPS25-201ENST00000253794 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
VPS25-201ENST00000253794 ZNF815PA8K554 130 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 TIMM17BO60830 172 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
VPS25-201ENST00000253794 PCP2Q8IVA1 136 aa8.9□□□□□ -0.98
VPS25-201ENST00000253794 SND1-IT1Q9HBX3 110 aa8.9□□□□□ -0.98
VPS25-201ENST00000253794 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 LINC00158P58513 81 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 KRTAP7-1Q8IUC3 87 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 LITAFQ99732 161 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
VPS25-201ENST00000253794 HERC2O95714 4834 aa8.88□□□□□ -0.99
VPS25-201ENST00000253794 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
VPS25-201ENST00000253794 VAMP8Q9BV40 100 aa8.88□□□□□ -0.99
VPS25-201ENST00000253794 FAT1Q14517 4588 aa8.88□□□□□ -0.99
VPS25-201ENST00000253794 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
VPS25-201ENST00000253794 HAMPP81172 84 aa8.87□□□□□ -0.99
VPS25-201ENST00000253794 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
VPS25-201ENST00000253794 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
VPS25-201ENST00000253794 DLEU1O43261 78 aa8.86□□□□□ -0.99
VPS25-201ENST00000253794 COX8AP10176 69 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms