RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 WFDC9Q8NEX5 89 aa15.2■□□□□ 0.02
RNF39-201ENST00000244360 SND1-IT1Q9HBX3 110 aa15.2■□□□□ 0.02
RNF39-201ENST00000244360 IBA57-AS1B1ANH7 110 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 WIPF1O43516 503 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 TOMM7Q9P0U1 55 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 IGHV4-28A0A0C4DH34 117 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 TRBV7-7A0A0K0K1E9 115 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 PAX4O43316 350 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 BAALC-AS2P0C853 105 aa15.19■□□□□ 0.02
RNF39-201ENST00000244360 LINC00158P58513 81 aa15.16■□□□□ 0.02
RNF39-201ENST00000244360 Q8NAQ8 132 aa15.16■□□□□ 0.02
RNF39-201ENST00000244360 INAFM2P0DMQ5 153 aa15.16■□□□□ 0.02
RNF39-201ENST00000244360 FAM218AQ96MZ4 157 aa15.16■□□□□ 0.02
RNF39-201ENST00000244360 LINC00337Q8N6G1 96 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 NBEAL2Q6ZNJ1 2754 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 IGKV2-28A0A075B6P5 120 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 DEFB4AO15263 64 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 IGKV2D-28P01615 120 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 MIFP14174 115 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 IMUPQ9GZP8 106 aa15.15■□□□□ 0.02
RNF39-201ENST00000244360 C5orf38Q86SI9 138 aa15.13■□□□□ 0.01
RNF39-201ENST00000244360 DAD1P61803 113 aa15.13■□□□□ 0.01
RNF39-201ENST00000244360 H0YGX0 51 aa15.12■□□□□ 0.01
RNF39-201ENST00000244360 A0A096LPF7 62 aa15.12■□□□□ 0.01
RNF39-201ENST00000244360 CCL18P55774 89 aa15.12■□□□□ 0.01
RNF39-201ENST00000244360 SS18Q15532 418 aa15.12■□□□□ 0.01
RNF39-201ENST00000244360 ATRQ13535 2644 aa15.11■□□□□ 0.01
RNF39-201ENST00000244360 LINC01561Q8N1V8 128 aa15.11■□□□□ 0.01
RNF39-201ENST00000244360 CELA1Q9UNI1 258 aa15.11■□□□□ 0.01
RNF39-201ENST00000244360 TEP1Q99973 2627 aaKnown RBP15.11■□□□□ 0.01
RNF39-201ENST00000244360 MALP21145 153 aa15.11■□□□□ 0.01
RNF39-201ENST00000244360 LINC00643Q86TS7 51 aa15.1■□□□□ 0.01
RNF39-201ENST00000244360 DNAL4O96015 105 aa15.09■□□□□ 0.01
RNF39-201ENST00000244360 ATP5G1P05496 136 aa15.09■□□□□ 0.01
RNF39-201ENST00000244360 SMIM11BQ8TCY0 68 aa15.09■□□□□ 0.01
RNF39-201ENST00000244360 C22orf24Q9Y442 160 aa15.09■□□□□ 0.01
RNF39-201ENST00000244360 IGHV4-30-4P0DP06 118 aa15.08■□□□□ 0
RNF39-201ENST00000244360 XCL1P47992 114 aa15.08■□□□□ 0
RNF39-201ENST00000244360 SDIM1Q6ZPB5 146 aa15.08■□□□□ 0
RNF39-201ENST00000244360 SPART-AS1P0CW21 52 aa15.06■□□□□ 0
RNF39-201ENST00000244360 C6orf226Q5I0X4 101 aa15.06■□□□□ 0
RNF39-201ENST00000244360 Q8IZM0 81 aa15.05■□□□□ 0
RNF39-201ENST00000244360 Q9HAA7 133 aa15.05■□□□□ 0
RNF39-201ENST00000244360 B5MCH6 92 aa15.05■□□□□ -0
RNF39-201ENST00000244360 PFN2P35080 140 aa15.05■□□□□ -0
RNF39-201ENST00000244360 CLPSL2Q6UWE3 100 aa15.04■□□□□ -0
RNF39-201ENST00000244360 CCDC179H3BU77 68 aa15.03■□□□□ -0
RNF39-201ENST00000244360 LINC00269Q8N2A0 174 aa15.02■□□□□ -0
RNF39-201ENST00000244360 SMCR5Q8TEV8 140 aa15.02■□□□□ -0
RNF39-201ENST00000244360 CD164L2Q6UWJ8 174 aa15.02□□□□□ -0.01
RNF39-201ENST00000244360 TRRAPQ9Y4A5 3859 aa15.01□□□□□ -0.01
RNF39-201ENST00000244360 A0A087WYN8 130 aa15.01□□□□□ -0.01
RNF39-201ENST00000244360 CXCL5P42830 114 aa15□□□□□ -0.01
RNF39-201ENST00000244360 GAGE2AQ6NT46 116 aa14.99□□□□□ -0.01
RNF39-201ENST00000244360 Q8N3U1 123 aa14.99□□□□□ -0.01
RNF39-201ENST00000244360 REG3AQ06141 175 aa14.98□□□□□ -0.01
RNF39-201ENST00000244360 CHCHD10Q8WYQ3 142 aaPredicted RBP14.98□□□□□ -0.01
RNF39-201ENST00000244360 SS18L2Q9UHA2 77 aa14.98□□□□□ -0.01
RNF39-201ENST00000244360 ANGP03950 147 aaKnown RBP14.98□□□□□ -0.01
RNF39-201ENST00000244360 LELP1Q5T871 98 aa14.98□□□□□ -0.01
RNF39-201ENST00000244360 OR13C6PQ8NH95 151 aa14.98□□□□□ -0.01
RNF39-201ENST00000244360 KIAA0087Q14695 138 aa14.97□□□□□ -0.01
RNF39-201ENST00000244360 OBSCN-AS1Q96MR7 158 aa14.97□□□□□ -0.01
RNF39-201ENST00000244360 C11orf68Q9H3H3 251 aaKnown RBP14.97□□□□□ -0.01
RNF39-201ENST00000244360 FAM236AA0A1B0GUQ0 79 aa14.96□□□□□ -0.02
RNF39-201ENST00000244360 FAM236BA0A1B0GV22 79 aa14.96□□□□□ -0.02
RNF39-201ENST00000244360 LECT2O14960 151 aa14.95□□□□□ -0.02
RNF39-201ENST00000244360 HTN3P15516 51 aa14.95□□□□□ -0.02
RNF39-201ENST00000244360 COX17Q14061 63 aa14.94□□□□□ -0.02
RNF39-201ENST00000244360 A0A1B0GX51 115 aa14.94□□□□□ -0.02
RNF39-201ENST00000244360 NDUFC2O95298 119 aa14.93□□□□□ -0.02
RNF39-201ENST00000244360 KRTAP10-11P60412 298 aa14.92□□□□□ -0.02
RNF39-201ENST00000244360 CFAP161Q6P656 301 aa14.92□□□□□ -0.02
RNF39-201ENST00000244360 ORMDL1Q9P0S3 153 aa14.92□□□□□ -0.02
RNF39-201ENST00000244360 KLK5Q9Y337 293 aaPredicted RBP14.92□□□□□ -0.02
RNF39-201ENST00000244360 IGLV10-54A0A075B6I4 117 aa14.91□□□□□ -0.02
RNF39-201ENST00000244360 OXLD1Q5BKU9 147 aa14.91□□□□□ -0.02
RNF39-201ENST00000244360 F8P00451 2351 aa14.9□□□□□ -0.02
RNF39-201ENST00000244360 PRR34Q9NV39 138 aa14.9□□□□□ -0.02
RNF39-201ENST00000244360 C14orf132Q9NPU4 83 aa14.89□□□□□ -0.03
RNF39-201ENST00000244360 LINC00167Q96N53 147 aa14.89□□□□□ -0.03
RNF39-201ENST00000244360 EGFEM1PQ0D2K5 195 aa14.88□□□□□ -0.03
RNF39-201ENST00000244360 KRTAP24-1Q3LI83 254 aa14.88□□□□□ -0.03
RNF39-201ENST00000244360 LYPD5Q6UWN5 251 aa14.86□□□□□ -0.03
RNF39-201ENST00000244360 TMEM126AQ9H061 195 aa14.86□□□□□ -0.03
RNF39-201ENST00000244360 H3BNG1 76 aa14.85□□□□□ -0.03
RNF39-201ENST00000244360 C9orf129Q5T035 196 aaKnown RBP14.85□□□□□ -0.03
RNF39-201ENST00000244360 MUC7Q8TAX7 377 aa14.85□□□□□ -0.03
RNF39-201ENST00000244360 RETNQ9HD89 108 aa14.85□□□□□ -0.03
RNF39-201ENST00000244360 Q6JHZ5 121 aa14.84□□□□□ -0.03
RNF39-201ENST00000244360 NANOS2P60321 138 aaKnown RBP14.82□□□□□ -0.04
RNF39-201ENST00000244360 KLK12Q9UKR0 248 aa14.82□□□□□ -0.04
RNF39-201ENST00000244360 JMJD7-PLA2G4BH0Y9G9 81 aa14.82□□□□□ -0.04
RNF39-201ENST00000244360 ENHOQ6UWT2 76 aa14.82□□□□□ -0.04
RNF39-201ENST00000244360 NCR3O14931 201 aa14.81□□□□□ -0.04
RNF39-201ENST00000244360 SLPIP03973 132 aa14.81□□□□□ -0.04
RNF39-201ENST00000244360 Q8N814 137 aa14.81□□□□□ -0.04
RNF39-201ENST00000244360 UQCRQO14949 82 aa14.8□□□□□ -0.04
RNF39-201ENST00000244360 HIST1H4AP62805 103 aaKnown RBP14.8□□□□□ -0.04
RNF39-201ENST00000244360 C3orf22Q8N5N4 141 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms