RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-201ENST00000238688 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
SLIRP-201ENST00000238688 IGHV3-30P01768 117 aa8.94□□□□□ -0.98
SLIRP-201ENST00000238688 IGHV3-30-5P0DP03 117 aa8.94□□□□□ -0.98
SLIRP-201ENST00000238688 Q9H8V8 135 aa8.94□□□□□ -0.98
SLIRP-201ENST00000238688 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
SLIRP-201ENST00000238688 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 F8WDY8 70 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 PRSS2P07478 247 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 XCL1P47992 114 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 FXYD2P54710 66 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
SLIRP-201ENST00000238688 IGLL5B9A064 214 aa8.92□□□□□ -0.98
SLIRP-201ENST00000238688 LITAFQ99732 161 aa8.92□□□□□ -0.98
SLIRP-201ENST00000238688 DNAH17Q9UFH2 4485 aa8.92□□□□□ -0.98
SLIRP-201ENST00000238688 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 MALP21145 153 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 FOXI1Q12951 378 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 COX17Q14061 63 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 RMI2Q96E14 147 aa8.91□□□□□ -0.98
SLIRP-201ENST00000238688 A0A0B4J2C4 111 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 C9orf118A6NHY6 69 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 CFAP161Q6P656 301 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 ENHOQ6UWT2 76 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
SLIRP-201ENST00000238688 NHP2Q9NX24 153 aaKnown RBP8.9□□□□□ -0.98
SLIRP-201ENST00000238688 HECTD4Q9Y4D8 3996 aa8.89□□□□□ -0.99
SLIRP-201ENST00000238688 LYRM7Q5U5X0 104 aa8.89□□□□□ -0.99
SLIRP-201ENST00000238688 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 DNAH2Q9P225 4427 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 A0A1B0GV90 55 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 CKS1BP61024 79 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 MEIG1Q5JSS6 88 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 CLPSL2Q6UWE3 100 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 UBE2WQ96B02 151 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 C1orf43Q9BWL3 253 aa8.88□□□□□ -0.99
SLIRP-201ENST00000238688 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
SLIRP-201ENST00000238688 TOMM7Q9P0U1 55 aa8.87□□□□□ -0.99
SLIRP-201ENST00000238688 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
SLIRP-201ENST00000238688 HERC2O95714 4834 aa8.86□□□□□ -0.99
SLIRP-201ENST00000238688 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
SLIRP-201ENST00000238688 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
SLIRP-201ENST00000238688 MUSTN1Q8IVN3 82 aa8.85□□□□□ -0.99
SLIRP-201ENST00000238688 Q8N3U1 123 aa8.85□□□□□ -0.99
SLIRP-201ENST00000238688 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
SLIRP-201ENST00000238688 IGLV10-54A0A075B6I4 117 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 A4D1N5 150 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 FABP2P12104 132 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 ADAMTSL4-AS1Q5T5F5 129 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 GTF2H5Q6ZYL4 71 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 RAB37Q96AX2 223 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 C2orf48Q96LS8 159 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 ERG28Q9UKR5 140 aa8.84□□□□□ -0.99
SLIRP-201ENST00000238688 SPAG11BQ08648 103 aa8.83□□□□□ -1
SLIRP-201ENST00000238688 KRTAP26-1Q6PEX3 210 aa8.83□□□□□ -1
SLIRP-201ENST00000238688 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
SLIRP-201ENST00000238688 A0A1W2PPM0 123 aa8.82□□□□□ -1
SLIRP-201ENST00000238688 CFC1BP0CG36 223 aa8.82□□□□□ -1
SLIRP-201ENST00000238688 CFC1P0CG37 223 aa8.82□□□□□ -1
SLIRP-201ENST00000238688 KIAA1109Q2LD37 5005 aa8.82□□□□□ -1
SLIRP-201ENST00000238688 VAMP3Q15836 100 aa8.81□□□□□ -1
SLIRP-201ENST00000238688 TTC32Q5I0X7 151 aa8.81□□□□□ -1
SLIRP-201ENST00000238688 H3BUT2 72 aa8.8□□□□□ -1
SLIRP-201ENST00000238688 ZNF561-AS1K7EIQ3 104 aa8.8□□□□□ -1
SLIRP-201ENST00000238688 LINC00158P58513 81 aa8.8□□□□□ -1
SLIRP-201ENST00000238688 UBE2V1Q13404 147 aa8.8□□□□□ -1
SLIRP-201ENST00000238688 PKHD1P08F94 4074 aa8.8□□□□□ -1
SLIRP-201ENST00000238688 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
SLIRP-201ENST00000238688 A0A1B0GVY2 172 aa8.79□□□□□ -1
SLIRP-201ENST00000238688 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
SLIRP-201ENST00000238688 MIR7-3HGQ8N6C7 128 aa8.79□□□□□ -1
SLIRP-201ENST00000238688 NTN5Q8WTR8 489 aaPredicted RBP8.79□□□□□ -1
SLIRP-201ENST00000238688 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
SLIRP-201ENST00000238688 PKD1P98161 4303 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 IGKV2D-24A0A075B6R9 120 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 K7ERJ3 54 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 RTL8CO15255 209 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 NDUFC2O95298 119 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
SLIRP-201ENST00000238688 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
SLIRP-201ENST00000238688 K7EP34 96 aa8.77□□□□□ -1.01
SLIRP-201ENST00000238688 RNF151Q2KHN1 245 aa8.77□□□□□ -1.01
SLIRP-201ENST00000238688 KRTAP17-1Q9BYP8 105 aa8.77□□□□□ -1.01
SLIRP-201ENST00000238688 M0R2N4 97 aa8.76□□□□□ -1.01
SLIRP-201ENST00000238688 TSPAN13O95857 204 aa8.76□□□□□ -1.01
SLIRP-201ENST00000238688 COX6CP09669 75 aa8.76□□□□□ -1.01
SLIRP-201ENST00000238688 Q6ZR54 194 aa8.76□□□□□ -1.01
SLIRP-201ENST00000238688 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
SLIRP-201ENST00000238688 SND1-IT1Q9HBX3 110 aa8.75□□□□□ -1.01
SLIRP-201ENST00000238688 SPCS1Q9Y6A9 102 aa8.75□□□□□ -1.01
SLIRP-201ENST00000238688 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
SLIRP-201ENST00000238688 DAND5Q8N907 189 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms