RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 GAGE2EQ4V326 116 aa3.6□□□□□ -1.83
RUFY3-201ENST00000226328 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
RUFY3-201ENST00000226328 GAGE2DQ9UEU5 116 aa3.6□□□□□ -1.83
RUFY3-201ENST00000226328 SCGB1C2P0DMR2 95 aa3.6□□□□□ -1.83
RUFY3-201ENST00000226328 POLR2KP53803 58 aaKnown RBP3.6□□□□□ -1.83
RUFY3-201ENST00000226328 Q6ZUT4 128 aa3.6□□□□□ -1.83
RUFY3-201ENST00000226328 EPM2AB3EWF7 344 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 E9PLD3 99 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 MRPS36P82909 103 aaKnown RBP3.59□□□□□ -1.83
RUFY3-201ENST00000226328 ZNF575Q86XF7 245 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 DPM2O94777 84 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 S100A7L2Q5SY68 101 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 CBLN2Q8IUK8 224 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 TMEM126AQ9H061 195 aa3.59□□□□□ -1.83
RUFY3-201ENST00000226328 TSHBP01222 138 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 TRGC2P03986 189 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 REG3GQ6UW15 175 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 PLNP26678 52 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 RPL39P62891 51 aaKnown RBP3.59□□□□□ -1.84
RUFY3-201ENST00000226328 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 C2orf48Q96LS8 159 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 VAMP8Q9BV40 100 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 KIF25-AS1Q9Y6Z4 181 aa3.59□□□□□ -1.84
RUFY3-201ENST00000226328 A0A1B0GXF2 115 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
RUFY3-201ENST00000226328 Q8N814 137 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 COX7B2Q8TF08 81 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 LYSTQ99698 3801 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 IGLV4-60A0A075B6I1 120 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 PFN2P35080 140 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 RNF185Q96GF1 192 aa3.58□□□□□ -1.84
RUFY3-201ENST00000226328 UBE2AP49459 152 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 ZNF706Q9Y5V0 76 aaPredicted RBP3.57□□□□□ -1.84
RUFY3-201ENST00000226328 Q6ZR54 194 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 NDUFS5O43920 106 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 STPG4Q8N801 248 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
RUFY3-201ENST00000226328 IGKCP01834 107 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 A0A0J9YXV3 536 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 LRCOL1A6NCL2 159 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 SPINK8P0C7L1 97 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 SLC25A34Q6PIV7 304 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 NRACQ8N912 160 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 C18orf32Q8TCD1 76 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 IGLV4-3A0A075B6K6 122 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 F8VRH5 84 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 UBE2D1P51668 147 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 COX6A2Q02221 97 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
RUFY3-201ENST00000226328 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 MAPKAPK5-AS1Q8N8E1 139 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 SLC25A20O43772 301 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 LINC00694P0DN24 101 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 RPL37AP61513 92 aaKnown RBP3.55□□□□□ -1.84
RUFY3-201ENST00000226328 Q1RN00 199 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 ETDCA0A1B0GVM5 59 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 SERF1AO75920 110 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 HSD52Q0P140 79 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 ENHOQ6UWT2 76 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 ZNF625Q96I27 306 aaPredicted RBP3.55□□□□□ -1.84
RUFY3-201ENST00000226328 SNHG12Q9BXW3 62 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 NDUFA12Q9UI09 145 aa3.55□□□□□ -1.84
RUFY3-201ENST00000226328 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 LOC107984156A0A0G2JMH3 177 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 PMCHL1Q16048 86 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 ARL17AQ8IVW1 177 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 NBEAL2Q6ZNJ1 2754 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 Q8IZM0 81 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
RUFY3-201ENST00000226328 OPRPNQ99935 248 aaPredicted RBP3.53□□□□□ -1.84
RUFY3-201ENST00000226328 LEPROTO15243 131 aa3.53□□□□□ -1.84
RUFY3-201ENST00000226328 ADCYAP1P18509 176 aa3.53□□□□□ -1.84
RUFY3-201ENST00000226328 C9orf163Q8N9P6 203 aa3.53□□□□□ -1.84
RUFY3-201ENST00000226328 MRPL35Q9NZE8 188 aaKnown RBP3.53□□□□□ -1.84
RUFY3-201ENST00000226328 GVQW2A0A096LPI5 108 aaPredicted RBP3.52□□□□□ -1.85
RUFY3-201ENST00000226328 RPL28P46779 137 aaKnown RBP3.52□□□□□ -1.85
RUFY3-201ENST00000226328 Q6ZRP5 223 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 DNAH6Q9C0G6 4158 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 ALMS1Q8TCU4 4167 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 TRAV12-1A0A0B4J245 112 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 C10orf91Q5T1B1 145 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 CDKN2A-AS1Q9UH64 79 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 SEC61BP60468 96 aaKnown RBP3.52□□□□□ -1.85
RUFY3-201ENST00000226328 ZC2HC1BQ5TFG8 222 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 ERG28Q9UKR5 140 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 TENM3Q9P273 2699 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 STARD9Q9P2P6 4700 aa3.52□□□□□ -1.85
RUFY3-201ENST00000226328 TRBV20-1A0A075B6N2 111 aa3.51□□□□□ -1.85
RUFY3-201ENST00000226328 F8WEM9 126 aa3.51□□□□□ -1.85
RUFY3-201ENST00000226328 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms