RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 RNASE3P12724 160 aaKnown RBP8.13□□□□□ -1.11
USP31-201ENST00000219689 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 MDFIQ99750 246 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 LY6G6EA0A0G2JKS1 128 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 U3KQA8 63 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 ZNF580Q9UK33 172 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 PRO0255Q9UI72 69 aa8.13□□□□□ -1.11
USP31-201ENST00000219689 COL4A4P53420 1690 aaPredicted RBP8.12□□□□□ -1.11
USP31-201ENST00000219689 PRM2P04554 102 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 LINC01548A6NM66 108 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 A0A096LNJ9 63 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 CXCL6P80162 114 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 RPL37AP8A6NKH3 93 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 Q8N7P7 452 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 IGFL3Q6UXB1 125 aa8.11□□□□□ -1.11
USP31-201ENST00000219689 MAP6D1Q9H9H5 199 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 TRANK1O15050 2925 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 Q6ZVQ6 151 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 F8WDY8 70 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
USP31-201ENST00000219689 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.1□□□□□ -1.11
USP31-201ENST00000219689 PCNTO95613 3336 aa8.1□□□□□ -1.11
USP31-201ENST00000219689 CNFNQ9BYD5 112 aa8.09□□□□□ -1.11
USP31-201ENST00000219689 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
USP31-201ENST00000219689 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
USP31-201ENST00000219689 TMEM89A2RUT3 159 aa8.09□□□□□ -1.11
USP31-201ENST00000219689 IGLV1-47P01700 117 aa8.08□□□□□ -1.12
USP31-201ENST00000219689 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
USP31-201ENST00000219689 MUC22E2RYF6 1773 aaPredicted RBP8.08□□□□□ -1.12
USP31-201ENST00000219689 ZFP36P26651 326 aaKnown RBP8.08□□□□□ -1.12
USP31-201ENST00000219689 C10orf25Q5T742 122 aa8.08□□□□□ -1.12
USP31-201ENST00000219689 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
USP31-201ENST00000219689 DEFB116Q30KQ4 102 aa8.08□□□□□ -1.12
USP31-201ENST00000219689 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
USP31-201ENST00000219689 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
USP31-201ENST00000219689 ITPR2Q14571 2701 aa8.07□□□□□ -1.12
USP31-201ENST00000219689 LOC100131303A0A0U1RQF7 123 aa8.07□□□□□ -1.12
USP31-201ENST00000219689 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
USP31-201ENST00000219689 M0R378 163 aa8.06□□□□□ -1.12
USP31-201ENST00000219689 ITPR1Q14643 2758 aa8.06□□□□□ -1.12
USP31-201ENST00000219689 RETNLBQ9BQ08 111 aa8.06□□□□□ -1.12
USP31-201ENST00000219689 CFAP54Q96N23 3096 aa8.06□□□□□ -1.12
USP31-201ENST00000219689 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
USP31-201ENST00000219689 APCP25054 2843 aa8.05□□□□□ -1.12
USP31-201ENST00000219689 FHL2Q14192 279 aa8.05□□□□□ -1.12
USP31-201ENST00000219689 DSPP15924 2871 aaKnown RBP8.05□□□□□ -1.12
USP31-201ENST00000219689 LINC00336Q6ZUF6 198 aa8.05□□□□□ -1.12
USP31-201ENST00000219689 X6R8D5 127 aa8.05□□□□□ -1.12
USP31-201ENST00000219689 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 IGLV9-49A0A0B4J1Y8 123 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 PLA2G2AP14555 144 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 A8MTW9 85 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 DNAH12Q6ZR08 3092 aa8.04□□□□□ -1.12
USP31-201ENST00000219689 CD164Q04900 197 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 IGLV2-18A0A075B6J9 118 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 LINC00959A0A1B0GUT2 108 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 MSMPQ1L6U9 139 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 SMIM29Q86T20 159 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 SMCR5Q8TEV8 140 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 LY6LH3BQJ8 138 aa8.03□□□□□ -1.12
USP31-201ENST00000219689 C8orf87E5RJ46 101 aa8.02□□□□□ -1.12
USP31-201ENST00000219689 ZNF706Q9Y5V0 76 aaPredicted RBP8.02□□□□□ -1.13
USP31-201ENST00000219689 FHL3Q13643 280 aa8.02□□□□□ -1.13
USP31-201ENST00000219689 CDC42SE2Q9NRR3 84 aa8.02□□□□□ -1.13
USP31-201ENST00000219689 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
USP31-201ENST00000219689 LINC00242Q5T6M2 205 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 IGHV6-1A0A0B4J1U7 121 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 SPINK1P00995 79 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 K7EQG2 157 aa8.01□□□□□ -1.13
USP31-201ENST00000219689 Q8IZM0 81 aa8□□□□□ -1.13
USP31-201ENST00000219689 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
USP31-201ENST00000219689 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
USP31-201ENST00000219689 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.99□□□□□ -1.13
USP31-201ENST00000219689 TM2D3Q9BRN9 247 aa7.99□□□□□ -1.13
USP31-201ENST00000219689 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
USP31-201ENST00000219689 LAMA2P24043 3122 aaKnown RBP7.99□□□□□ -1.13
USP31-201ENST00000219689 LRBAP50851 2863 aa7.98□□□□□ -1.13
USP31-201ENST00000219689 C11orf45Q8TAV5 145 aa7.98□□□□□ -1.13
USP31-201ENST00000219689 MUC7Q8TAX7 377 aa7.98□□□□□ -1.13
USP31-201ENST00000219689 KLLNB2CW77 178 aa7.98□□□□□ -1.13
USP31-201ENST00000219689 ODF3BA8MYP8 253 aa7.97□□□□□ -1.13
USP31-201ENST00000219689 CHCHD7Q9BUK0 85 aa7.97□□□□□ -1.13
USP31-201ENST00000219689 PSMG3-AS1Q96PY0 264 aa7.97□□□□□ -1.13
USP31-201ENST00000219689 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
USP31-201ENST00000219689 AMELXQ99217 191 aa7.97□□□□□ -1.13
USP31-201ENST00000219689 A6NDX4 124 aa7.96□□□□□ -1.13
USP31-201ENST00000219689 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.13
USP31-201ENST00000219689 NHLRC4P0CG21 123 aaPredicted RBP7.96□□□□□ -1.13
USP31-201ENST00000219689 A0A1B0GU69 56 aa7.96□□□□□ -1.13
USP31-201ENST00000219689 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
USP31-201ENST00000219689 FSHBP01225 129 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms