RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TRIAP1O43715 76 aa20.24■□□□□ 0.83
PABPN1-201ENST00000216727 MIR7-3HGQ8N6C7 128 aa20.24■□□□□ 0.83
PABPN1-201ENST00000216727 RPL13AP40429 203 aaKnown RBP20.24■□□□□ 0.83
PABPN1-201ENST00000216727 MTURNQ8N3F0 131 aa20.23■□□□□ 0.83
PABPN1-201ENST00000216727 NOTCH1P46531 2555 aa20.22■□□□□ 0.83
PABPN1-201ENST00000216727 IGLV10-54A0A075B6I4 117 aa20.22■□□□□ 0.83
PABPN1-201ENST00000216727 C11orf45Q8TAV5 145 aa20.22■□□□□ 0.83
PABPN1-201ENST00000216727 TENM3Q9P273 2699 aa20.21■□□□□ 0.83
PABPN1-201ENST00000216727 LINC00158P58513 81 aa20.21■□□□□ 0.83
PABPN1-201ENST00000216727 FOXI1Q12951 378 aa20.2■□□□□ 0.83
PABPN1-201ENST00000216727 NANOS2P60321 138 aaKnown RBP20.19■□□□□ 0.82
PABPN1-201ENST00000216727 COX6CP09669 75 aa20.19■□□□□ 0.82
PABPN1-201ENST00000216727 SMCPP49901 116 aaPredicted RBP20.19■□□□□ 0.82
PABPN1-201ENST00000216727 KIAA0087Q14695 138 aa20.19■□□□□ 0.82
PABPN1-201ENST00000216727 KLK12Q9UKR0 248 aa20.19■□□□□ 0.82
PABPN1-201ENST00000216727 SPATA25Q9BR10 227 aa20.18■□□□□ 0.82
PABPN1-201ENST00000216727 MALP21145 153 aa20.17■□□□□ 0.82
PABPN1-201ENST00000216727 CXCL5P42830 114 aa20.17■□□□□ 0.82
PABPN1-201ENST00000216727 ETDBQ3ZM63 59 aa20.17■□□□□ 0.82
PABPN1-201ENST00000216727 ATXN8Q156A1 80 aa20.17■□□□□ 0.82
PABPN1-201ENST00000216727 DEFB131BA0A096LNP1 70 aa20.16■□□□□ 0.82
PABPN1-201ENST00000216727 ENHOQ6UWT2 76 aa20.15■□□□□ 0.82
PABPN1-201ENST00000216727 CKS1BP61024 79 aa20.15■□□□□ 0.82
PABPN1-201ENST00000216727 TM2D3Q9BRN9 247 aa20.15■□□□□ 0.82
PABPN1-201ENST00000216727 K7EIL1 84 aa20.14■□□□□ 0.81
PABPN1-201ENST00000216727 NBEAL1Q6ZS30 2694 aa20.14■□□□□ 0.81
PABPN1-201ENST00000216727 PRB2P02812 416 aaPredicted RBP20.14■□□□□ 0.81
PABPN1-201ENST00000216727 PFN2P35080 140 aa20.14■□□□□ 0.81
PABPN1-201ENST00000216727 C2orf82Q6UX34 121 aa20.14■□□□□ 0.81
PABPN1-201ENST00000216727 CFAP161Q6P656 301 aa20.13■□□□□ 0.81
PABPN1-201ENST00000216727 SND1-IT1Q9HBX3 110 aa20.13■□□□□ 0.81
PABPN1-201ENST00000216727 GAGE12HA6NDE8 117 aa20.12■□□□□ 0.81
PABPN1-201ENST00000216727 CCL18P55774 89 aa20.12■□□□□ 0.81
PABPN1-201ENST00000216727 RNF151Q2KHN1 245 aa20.12■□□□□ 0.81
PABPN1-201ENST00000216727 WFDC10BQ8IUB3 73 aa20.12■□□□□ 0.81
PABPN1-201ENST00000216727 KLK5Q9Y337 293 aaPredicted RBP20.12■□□□□ 0.81
PABPN1-201ENST00000216727 TRAV8-4A0A0B4J246 113 aa20.1■□□□□ 0.81
PABPN1-201ENST00000216727 TRAV13-2A0A0B4J235 113 aa20.1■□□□□ 0.81
PABPN1-201ENST00000216727 ESRGQ1W209 222 aa20.1■□□□□ 0.81
PABPN1-201ENST00000216727 CRPP02741 224 aa20.09■□□□□ 0.81
PABPN1-201ENST00000216727 M0QXV9 152 aa20.09■□□□□ 0.81
PABPN1-201ENST00000216727 COX17Q14061 63 aa20.08■□□□□ 0.8
PABPN1-201ENST00000216727 LINC01620Q4KN68 170 aa20.07■□□□□ 0.8
PABPN1-201ENST00000216727 C9JAW5 83 aa20.07■□□□□ 0.8
PABPN1-201ENST00000216727 IGKV2-28A0A075B6P5 120 aa20.06■□□□□ 0.8
PABPN1-201ENST00000216727 IGKV2D-28P01615 120 aa20.06■□□□□ 0.8
PABPN1-201ENST00000216727 UBE2WQ96B02 151 aa20.06■□□□□ 0.8
PABPN1-201ENST00000216727 SLC25A20O43772 301 aa20.05■□□□□ 0.8
PABPN1-201ENST00000216727 DEFB121Q5J5C9 76 aa20.05■□□□□ 0.8
PABPN1-201ENST00000216727 J3QR89 54 aa20.03■□□□□ 0.8
PABPN1-201ENST00000216727 LST1O00453 97 aa20.03■□□□□ 0.8
PABPN1-201ENST00000216727 LINC00337Q8N6G1 96 aa20.03■□□□□ 0.8
PABPN1-201ENST00000216727 LINC01600Q96MT4 127 aa20.03■□□□□ 0.8
PABPN1-201ENST00000216727 VPS25Q9BRG1 176 aa20.03■□□□□ 0.8
PABPN1-201ENST00000216727 TRAV10A0A0B4J240 114 aa20.02■□□□□ 0.8
PABPN1-201ENST00000216727 TEN1Q86WV5 123 aa20.02■□□□□ 0.8
PABPN1-201ENST00000216727 CBY1Q9Y3M2 126 aa20.02■□□□□ 0.8
PABPN1-201ENST00000216727 SPAG11BQ08648 103 aa20.02■□□□□ 0.79
PABPN1-201ENST00000216727 CLEC2BQ92478 149 aa20.01■□□□□ 0.79
PABPN1-201ENST00000216727 MRAPQ8TCY5 172 aa20■□□□□ 0.79
PABPN1-201ENST00000216727 TRBV10-2A0A0K0K1G8 114 aa19.99■□□□□ 0.79
PABPN1-201ENST00000216727 LINC01556Q5JQF7 62 aa19.99■□□□□ 0.79
PABPN1-201ENST00000216727 MGAM2Q2M2H8 2515 aa19.98■□□□□ 0.79
PABPN1-201ENST00000216727 RPL28P46779 137 aaKnown RBP19.97■□□□□ 0.79
PABPN1-201ENST00000216727 ANKRD29Q8N6D5 301 aa19.97■□□□□ 0.79
PABPN1-201ENST00000216727 C15orf53Q8NAA6 179 aa19.97■□□□□ 0.79
PABPN1-201ENST00000216727 KRTAP26-1Q6PEX3 210 aa19.95■□□□□ 0.78
PABPN1-201ENST00000216727 MUC7Q8TAX7 377 aa19.95■□□□□ 0.78
PABPN1-201ENST00000216727 PPDPFLQ8WWR9 84 aa19.94■□□□□ 0.78
PABPN1-201ENST00000216727 MDFIQ99750 246 aa19.94■□□□□ 0.78
PABPN1-201ENST00000216727 HUWE1Q7Z6Z7 4374 aaKnown RBP19.94■□□□□ 0.78
PABPN1-201ENST00000216727 C6orf223Q8N319 242 aa19.93■□□□□ 0.78
PABPN1-201ENST00000216727 UNQ6190/PRO20217Q6UXQ8 127 aa19.92■□□□□ 0.78
PABPN1-201ENST00000216727 C9orf116Q5BN46 136 aaPredicted RBP19.92■□□□□ 0.78
PABPN1-201ENST00000216727 C10orf25Q5T742 122 aa19.92■□□□□ 0.78
PABPN1-201ENST00000216727 NDUFC2O95298 119 aa19.91■□□□□ 0.78
PABPN1-201ENST00000216727 H3BT86 120 aa19.9■□□□□ 0.78
PABPN1-201ENST00000216727 GVQW2A0A096LPI5 108 aaPredicted RBP19.9■□□□□ 0.78
PABPN1-201ENST00000216727 NTN5Q8WTR8 489 aaPredicted RBP19.9■□□□□ 0.78
PABPN1-201ENST00000216727 CARD19Q96LW7 228 aa19.9■□□□□ 0.78
PABPN1-201ENST00000216727 DNAH10OSP0CZ25 163 aa19.89■□□□□ 0.77
PABPN1-201ENST00000216727 SMIM11BQ8TCY0 68 aa19.88■□□□□ 0.77
PABPN1-201ENST00000216727 LINC00526Q96FQ7 95 aa19.88■□□□□ 0.77
PABPN1-201ENST00000216727 TRACP01848 142 aa19.85■□□□□ 0.77
PABPN1-201ENST00000216727 C1orf43Q9BWL3 253 aa19.84■□□□□ 0.77
PABPN1-201ENST00000216727 OR13C6PQ8NH95 151 aa19.83■□□□□ 0.76
PABPN1-201ENST00000216727 LINC00588Q9Y4M8 146 aa19.81■□□□□ 0.76
PABPN1-201ENST00000216727 ZNF561-AS1K7EIQ3 104 aa19.8■□□□□ 0.76
PABPN1-201ENST00000216727 FAM218AQ96MZ4 157 aa19.8■□□□□ 0.76
PABPN1-201ENST00000216727 C6orf48Q9UBA6 75 aa19.8■□□□□ 0.76
PABPN1-201ENST00000216727 H0YGX0 51 aa19.79■□□□□ 0.76
PABPN1-201ENST00000216727 C15orf56Q8N910 161 aa19.78■□□□□ 0.76
PABPN1-201ENST00000216727 IGKV2D-24A0A075B6R9 120 aa19.76■□□□□ 0.75
PABPN1-201ENST00000216727 PRR3P79522 188 aaKnown RBP19.76■□□□□ 0.75
PABPN1-201ENST00000216727 C2orf48Q96LS8 159 aa19.76■□□□□ 0.75
PABPN1-201ENST00000216727 HIGD2BQ4VC39 106 aa19.75■□□□□ 0.75
PABPN1-201ENST00000216727 CAMK2N2Q96S95 79 aa19.75■□□□□ 0.75
PABPN1-201ENST00000216727 TMEM126AQ9H061 195 aa19.75■□□□□ 0.75
PABPN1-201ENST00000216727 Q8NDZ9 215 aa19.73■□□□□ 0.75
PABPN1-201ENST00000216727 TEX49A0A1B0GTD5 131 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms