RNA–Protein interactions for RNA: ENST00000216420.11

CGRRF1-201, Transcript of cell growth regulator with ring finger domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGRRF1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-201ENST00000216420 Q8N3U1 123 aa12.69□□□□□ -0.38
CGRRF1-201ENST00000216420 NOP10Q9NPE3 64 aaKnown RBP12.69□□□□□ -0.38
CGRRF1-201ENST00000216420 LINC00474Q9P2X8 69 aa12.69□□□□□ -0.38
CGRRF1-201ENST00000216420 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
CGRRF1-201ENST00000216420 PKIGQ9Y2B9 76 aa12.69□□□□□ -0.38
CGRRF1-201ENST00000216420 PLAC8L1A1L4L8 177 aa12.68□□□□□ -0.38
CGRRF1-201ENST00000216420 C11orf68Q9H3H3 251 aaKnown RBP12.68□□□□□ -0.38
CGRRF1-201ENST00000216420 C4orf3Q8WVX3 66 aa12.67□□□□□ -0.38
CGRRF1-201ENST00000216420 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
CGRRF1-201ENST00000216420 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
CGRRF1-201ENST00000216420 IGHV4-28A0A0C4DH34 117 aa12.66□□□□□ -0.38
CGRRF1-201ENST00000216420 RNASE1P07998 156 aaKnown RBP12.66□□□□□ -0.38
CGRRF1-201ENST00000216420 C16orf74Q96GX8 76 aa12.66□□□□□ -0.38
CGRRF1-201ENST00000216420 SPTA1P02549 2419 aa12.66□□□□□ -0.38
CGRRF1-201ENST00000216420 C19orf84I3L1E1 186 aa12.65□□□□□ -0.39
CGRRF1-201ENST00000216420 CCL19Q99731 98 aa12.65□□□□□ -0.39
CGRRF1-201ENST00000216420 AKAP6Q13023 2319 aa12.64□□□□□ -0.39
CGRRF1-201ENST00000216420 TRGV2A0A075B6R0 118 aa12.64□□□□□ -0.39
CGRRF1-201ENST00000216420 A0A1B0GUV1 79 aa12.64□□□□□ -0.39
CGRRF1-201ENST00000216420 KIAA0087Q14695 138 aa12.64□□□□□ -0.39
CGRRF1-201ENST00000216420 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
CGRRF1-201ENST00000216420 NREPQ16612 68 aa12.63□□□□□ -0.39
CGRRF1-201ENST00000216420 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
CGRRF1-201ENST00000216420 TMEM254Q8TBM7 123 aa12.63□□□□□ -0.39
CGRRF1-201ENST00000216420 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
CGRRF1-201ENST00000216420 PLA2G2AP14555 144 aa12.63□□□□□ -0.39
CGRRF1-201ENST00000216420 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
CGRRF1-201ENST00000216420 C1orf195Q5TG92 126 aa12.62□□□□□ -0.39
CGRRF1-201ENST00000216420 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
CGRRF1-201ENST00000216420 BRK1Q8WUW1 75 aa12.61□□□□□ -0.39
CGRRF1-201ENST00000216420 Q6YL49 198 aa12.6□□□□□ -0.39
CGRRF1-201ENST00000216420 SPATA3Q8NHX4 192 aa12.6□□□□□ -0.39
CGRRF1-201ENST00000216420 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
CGRRF1-201ENST00000216420 Q8NDZ9 215 aa12.6□□□□□ -0.39
CGRRF1-201ENST00000216420 V9GYY9 64 aa12.6□□□□□ -0.39
CGRRF1-201ENST00000216420 GIG44P09565 113 aaPredicted RBP12.58□□□□□ -0.39
CGRRF1-201ENST00000216420 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
CGRRF1-201ENST00000216420 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
CGRRF1-201ENST00000216420 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
CGRRF1-201ENST00000216420 BPY2O14599 106 aa12.57□□□□□ -0.4
CGRRF1-201ENST00000216420 A0A0U1RQV1 116 aa12.57□□□□□ -0.4
CGRRF1-201ENST00000216420 Q6ZQY7 126 aa12.57□□□□□ -0.4
CGRRF1-201ENST00000216420 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
CGRRF1-201ENST00000216420 FAM229BQ4G0N7 80 aa12.55□□□□□ -0.4
CGRRF1-201ENST00000216420 FSHBP01225 129 aa12.55□□□□□ -0.4
CGRRF1-201ENST00000216420 CD164L2Q6UWJ8 174 aa12.55□□□□□ -0.4
CGRRF1-201ENST00000216420 PRYO14603 147 aa12.54□□□□□ -0.4
CGRRF1-201ENST00000216420 ESRGQ1W209 222 aa12.54□□□□□ -0.4
CGRRF1-201ENST00000216420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.54□□□□□ -0.4
CGRRF1-201ENST00000216420 DSCR9P59020 149 aa12.53□□□□□ -0.4
CGRRF1-201ENST00000216420 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
CGRRF1-201ENST00000216420 SEC61GP60059 68 aa12.53□□□□□ -0.4
CGRRF1-201ENST00000216420 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
CGRRF1-201ENST00000216420 OCR1Q9BZK8 76 aa12.53□□□□□ -0.4
CGRRF1-201ENST00000216420 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.4
CGRRF1-201ENST00000216420 GNLYP22749 145 aa12.52□□□□□ -0.4
CGRRF1-201ENST00000216420 Q6ZTC4 211 aa12.52□□□□□ -0.41
CGRRF1-201ENST00000216420 CCL24O00175 119 aa12.51□□□□□ -0.41
CGRRF1-201ENST00000216420 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
CGRRF1-201ENST00000216420 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
CGRRF1-201ENST00000216420 SCXQ7RTU7 201 aa12.5□□□□□ -0.41
CGRRF1-201ENST00000216420 CSNK1G2-AS1Q8NCQ2 148 aa12.5□□□□□ -0.41
CGRRF1-201ENST00000216420 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
CGRRF1-201ENST00000216420 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
CGRRF1-201ENST00000216420 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
CGRRF1-201ENST00000216420 COX7BP24311 80 aa12.48□□□□□ -0.41
CGRRF1-201ENST00000216420 MPLKIPQ8TAP9 179 aa12.47□□□□□ -0.41
CGRRF1-201ENST00000216420 LINC00269Q8N2A0 174 aa12.46□□□□□ -0.41
CGRRF1-201ENST00000216420 A0A0J9YWU9 116 aa12.46□□□□□ -0.42
CGRRF1-201ENST00000216420 IGHV4-30-4P0DP06 118 aa12.46□□□□□ -0.42
CGRRF1-201ENST00000216420 LINC00612Q8N6U2 182 aa12.46□□□□□ -0.42
CGRRF1-201ENST00000216420 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.42
CGRRF1-201ENST00000216420 DIRC1Q969H9 104 aa12.46□□□□□ -0.42
CGRRF1-201ENST00000216420 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
CGRRF1-201ENST00000216420 TTC28Q96AY4 2481 aa12.45□□□□□ -0.42
CGRRF1-201ENST00000216420 PRR15Q8IV56 129 aa12.44□□□□□ -0.42
CGRRF1-201ENST00000216420 GYPEP15421 78 aa12.43□□□□□ -0.42
CGRRF1-201ENST00000216420 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
CGRRF1-201ENST00000216420 CELA1Q9UNI1 258 aa12.42□□□□□ -0.42
CGRRF1-201ENST00000216420 ELOF1P60002 83 aaKnown RBP12.42□□□□□ -0.42
CGRRF1-201ENST00000216420 ESM1Q9NQ30 184 aa12.42□□□□□ -0.42
CGRRF1-201ENST00000216420 CEP295Q9C0D2 2601 aa12.42□□□□□ -0.42
CGRRF1-201ENST00000216420 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
CGRRF1-201ENST00000216420 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
CGRRF1-201ENST00000216420 BBC3Q96PG8 261 aaPredicted RBP12.41□□□□□ -0.42
CGRRF1-201ENST00000216420 ATRXP46100 2492 aa12.4□□□□□ -0.42
CGRRF1-201ENST00000216420 NOTCH3Q9UM47 2321 aa12.4□□□□□ -0.42
CGRRF1-201ENST00000216420 COL12A1Q99715 3063 aa12.4□□□□□ -0.42
CGRRF1-201ENST00000216420 LCE6AA0A183 80 aa12.4□□□□□ -0.42
CGRRF1-201ENST00000216420 GVQW2A0A096LPI5 108 aaPredicted RBP12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 hDV103S1A0JD37 113 aa12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 Q1T7F1 81 aa12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 C10orf25Q5T742 122 aa12.39□□□□□ -0.43
CGRRF1-201ENST00000216420 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
CGRRF1-201ENST00000216420 UNQ6190/PRO20217Q6UXQ8 127 aa12.38□□□□□ -0.43
CGRRF1-201ENST00000216420 REG3AQ06141 175 aa12.38□□□□□ -0.43
CGRRF1-201ENST00000216420 Q6ZRU5 148 aa12.37□□□□□ -0.43
CGRRF1-201ENST00000216420 CR1P17927 2039 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms