RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
MRPL28-201ENST00000199706 COLCA2A8K830 154 aa10.94□□□□□ -0.66
MRPL28-201ENST00000199706 RPL18AQ02543 176 aaKnown RBP10.94□□□□□ -0.66
MRPL28-201ENST00000199706 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
MRPL28-201ENST00000199706 H3BRM9 83 aa10.93□□□□□ -0.66
MRPL28-201ENST00000199706 TRGC2P03986 189 aa10.93□□□□□ -0.66
MRPL28-201ENST00000199706 CKS1BP61024 79 aa10.93□□□□□ -0.66
MRPL28-201ENST00000199706 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
MRPL28-201ENST00000199706 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
MRPL28-201ENST00000199706 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
MRPL28-201ENST00000199706 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
MRPL28-201ENST00000199706 F8VRH5 84 aa10.91□□□□□ -0.66
MRPL28-201ENST00000199706 ODF1Q14990 250 aa10.91□□□□□ -0.66
MRPL28-201ENST00000199706 Q6ZRP5 223 aa10.91□□□□□ -0.66
MRPL28-201ENST00000199706 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
MRPL28-201ENST00000199706 HSBP1O75506 76 aa10.9□□□□□ -0.66
MRPL28-201ENST00000199706 BAGE3Q86Y29 109 aa10.9□□□□□ -0.66
MRPL28-201ENST00000199706 TRAV12-1A0A0B4J245 112 aa10.89□□□□□ -0.67
MRPL28-201ENST00000199706 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
MRPL28-201ENST00000199706 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
MRPL28-201ENST00000199706 COX7B2Q8TF08 81 aa10.88□□□□□ -0.67
MRPL28-201ENST00000199706 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
MRPL28-201ENST00000199706 KRTAP29-1A8MX34 341 aaPredicted RBP10.87□□□□□ -0.67
MRPL28-201ENST00000199706 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
MRPL28-201ENST00000199706 NDUFA6P56556 154 aa10.87□□□□□ -0.67
MRPL28-201ENST00000199706 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
MRPL28-201ENST00000199706 IFI27L1Q96BM0 104 aa10.87□□□□□ -0.67
MRPL28-201ENST00000199706 OXTP01178 125 aa10.85□□□□□ -0.67
MRPL28-201ENST00000199706 SPINK8P0C7L1 97 aa10.85□□□□□ -0.67
MRPL28-201ENST00000199706 LINC00310P59036 64 aa10.85□□□□□ -0.67
MRPL28-201ENST00000199706 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
MRPL28-201ENST00000199706 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
MRPL28-201ENST00000199706 SERF1AO75920 110 aa10.84□□□□□ -0.67
MRPL28-201ENST00000199706 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
MRPL28-201ENST00000199706 HNRNPA3P51991 378 aaKnown RBP10.83□□□□□ -0.68
MRPL28-201ENST00000199706 GAGE2EQ4V326 116 aa10.83□□□□□ -0.68
MRPL28-201ENST00000199706 GAGE2DQ9UEU5 116 aa10.83□□□□□ -0.68
MRPL28-201ENST00000199706 HERC1Q15751 4861 aa10.81□□□□□ -0.68
MRPL28-201ENST00000199706 LEPROTL1O95214 131 aa10.81□□□□□ -0.68
MRPL28-201ENST00000199706 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
MRPL28-201ENST00000199706 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
MRPL28-201ENST00000199706 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
MRPL28-201ENST00000199706 LRP1Q07954 4544 aaKnown RBP10.8□□□□□ -0.68
MRPL28-201ENST00000199706 HSPB8Q9UJY1 196 aa10.8□□□□□ -0.68
MRPL28-201ENST00000199706 FAM168BA1KXE4 195 aa10.79□□□□□ -0.68
MRPL28-201ENST00000199706 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
MRPL28-201ENST00000199706 SCO1O75880 301 aa10.78□□□□□ -0.68
MRPL28-201ENST00000199706 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
MRPL28-201ENST00000199706 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 M0QXV9 152 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 COX17Q14061 63 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
MRPL28-201ENST00000199706 PHF5AQ7RTV0 110 aaKnown RBP10.77□□□□□ -0.69
MRPL28-201ENST00000199706 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
MRPL28-201ENST00000199706 SPINK6Q6UWN8 80 aa10.76□□□□□ -0.69
MRPL28-201ENST00000199706 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
MRPL28-201ENST00000199706 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
MRPL28-201ENST00000199706 J3QL48 77 aa10.75□□□□□ -0.69
MRPL28-201ENST00000199706 NUPR1O60356 82 aa10.75□□□□□ -0.69
MRPL28-201ENST00000199706 PLNP26678 52 aa10.75□□□□□ -0.69
MRPL28-201ENST00000199706 ZNF625Q96I27 306 aaPredicted RBP10.75□□□□□ -0.69
MRPL28-201ENST00000199706 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
MRPL28-201ENST00000199706 XAGE1AQ9HD64 81 aa10.74□□□□□ -0.69
MRPL28-201ENST00000199706 LBHQ53QV2 105 aaPredicted RBP10.72□□□□□ -0.69
MRPL28-201ENST00000199706 COA6Q5JTJ3 125 aaKnown RBP10.72□□□□□ -0.69
MRPL28-201ENST00000199706 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
MRPL28-201ENST00000199706 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
MRPL28-201ENST00000199706 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
MRPL28-201ENST00000199706 S100A1P23297 94 aa10.7□□□□□ -0.7
MRPL28-201ENST00000199706 MAP1LC3CQ9BXW4 147 aa10.7□□□□□ -0.7
MRPL28-201ENST00000199706 C22orf24Q9Y442 160 aa10.7□□□□□ -0.7
MRPL28-201ENST00000199706 DPM2O94777 84 aa10.69□□□□□ -0.7
MRPL28-201ENST00000199706 FABP4P15090 132 aa10.69□□□□□ -0.7
MRPL28-201ENST00000199706 C1orf137Q5JT78 98 aa10.69□□□□□ -0.7
MRPL28-201ENST00000199706 UBE2BP63146 152 aa10.68□□□□□ -0.7
MRPL28-201ENST00000199706 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
MRPL28-201ENST00000199706 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
MRPL28-201ENST00000199706 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
MRPL28-201ENST00000199706 H0Y8G0 127 aa10.67□□□□□ -0.7
MRPL28-201ENST00000199706 IGLV7-43P04211 117 aa10.67□□□□□ -0.7
MRPL28-201ENST00000199706 HERV-K104P63124 156 aa10.67□□□□□ -0.7
MRPL28-201ENST00000199706 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
MRPL28-201ENST00000199706 PFN2P35080 140 aa10.66□□□□□ -0.7
MRPL28-201ENST00000199706 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
MRPL28-201ENST00000199706 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
MRPL28-201ENST00000199706 IGKCP01834 107 aa10.65□□□□□ -0.7
MRPL28-201ENST00000199706 MT1HL1P0DM35 61 aa10.65□□□□□ -0.7
MRPL28-201ENST00000199706 HERVK_113P61574 105 aa10.65□□□□□ -0.7
MRPL28-201ENST00000199706 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms