RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 MRPL55Q7Z7F7 128 aaKnown RBP16.52■□□□□ 0.23
TARBP1-201ENST00000040877 USP9YO00507 2555 aaPredicted RBP16.51■□□□□ 0.23
TARBP1-201ENST00000040877 C2orf48Q96LS8 159 aa16.5■□□□□ 0.23
TARBP1-201ENST00000040877 NDUFC1O43677 76 aa16.49■□□□□ 0.23
TARBP1-201ENST00000040877 FN1P02751 2386 aaKnown RBP16.49■□□□□ 0.23
TARBP1-201ENST00000040877 LRRK2Q5S007 2527 aa16.49■□□□□ 0.23
TARBP1-201ENST00000040877 COX6A2Q02221 97 aa16.49■□□□□ 0.23
TARBP1-201ENST00000040877 SNURFQ9Y675 71 aa16.49■□□□□ 0.23
TARBP1-201ENST00000040877 FAM19A3Q7Z5A8 133 aa16.48■□□□□ 0.23
TARBP1-201ENST00000040877 SPINK6Q6UWN8 80 aa16.48■□□□□ 0.23
TARBP1-201ENST00000040877 NTM-AS1Q6ZSK4 140 aa16.48■□□□□ 0.23
TARBP1-201ENST00000040877 ATP5EP56381 51 aaPredicted RBP16.48■□□□□ 0.23
TARBP1-201ENST00000040877 TRBV10-3A0A0K0K1G6 114 aa16.46■□□□□ 0.23
TARBP1-201ENST00000040877 C10orf25Q5T742 122 aa16.46■□□□□ 0.23
TARBP1-201ENST00000040877 C6orf223Q8N319 242 aa16.46■□□□□ 0.23
TARBP1-201ENST00000040877 NHLRC4P0CG21 123 aaPredicted RBP16.45■□□□□ 0.22
TARBP1-201ENST00000040877 LYPD5Q6UWN5 251 aa16.45■□□□□ 0.22
TARBP1-201ENST00000040877 REG3GQ6UW15 175 aa16.45■□□□□ 0.22
TARBP1-201ENST00000040877 Q8N814 137 aa16.44■□□□□ 0.22
TARBP1-201ENST00000040877 CHD8Q9HCK8 2581 aa16.44■□□□□ 0.22
TARBP1-201ENST00000040877 IGLV9-49A0A0B4J1Y8 123 aa16.43■□□□□ 0.22
TARBP1-201ENST00000040877 Q6JHZ5 121 aa16.43■□□□□ 0.22
TARBP1-201ENST00000040877 Q6ZSN1 163 aa16.43■□□□□ 0.22
TARBP1-201ENST00000040877 A0A096LNJ9 63 aa16.43■□□□□ 0.22
TARBP1-201ENST00000040877 C9orf116Q5BN46 136 aaPredicted RBP16.43■□□□□ 0.22
TARBP1-201ENST00000040877 TSPEAR-AS2P59090 65 aa16.43■□□□□ 0.22
TARBP1-201ENST00000040877 WFDC13Q8IUB5 93 aa16.41■□□□□ 0.22
TARBP1-201ENST00000040877 KIF25-AS1Q9Y6Z4 181 aa16.39■□□□□ 0.21
TARBP1-201ENST00000040877 IGLV5-52A0A0A0MRZ9 124 aa16.39■□□□□ 0.21
TARBP1-201ENST00000040877 HRCT1Q6UXD1 115 aa16.38■□□□□ 0.21
TARBP1-201ENST00000040877 C11orf72Q8NBR9 251 aa16.37■□□□□ 0.21
TARBP1-201ENST00000040877 C1orf137Q5JT78 98 aa16.36■□□□□ 0.21
TARBP1-201ENST00000040877 SPTBN4Q9H254 2564 aa16.36■□□□□ 0.21
TARBP1-201ENST00000040877 ADAMTSL4-AS1Q5T5F5 129 aa16.35■□□□□ 0.21
TARBP1-201ENST00000040877 PRYO14603 147 aa16.35■□□□□ 0.21
TARBP1-201ENST00000040877 SETD2Q9BYW2 2564 aaPredicted RBP16.35■□□□□ 0.21
TARBP1-201ENST00000040877 ZNF462Q96JM2 2506 aa16.34■□□□□ 0.21
TARBP1-201ENST00000040877 FHL3Q13643 280 aa16.34■□□□□ 0.21
TARBP1-201ENST00000040877 SMIM26A0A096LP01 95 aa16.33■□□□□ 0.21
TARBP1-201ENST00000040877 C1orf134Q5TEV5 83 aa16.33■□□□□ 0.2
TARBP1-201ENST00000040877 COL4A2P08572 1712 aa16.33■□□□□ 0.2
TARBP1-201ENST00000040877 C1orf195Q5TG92 126 aa16.32■□□□□ 0.2
TARBP1-201ENST00000040877 Q8N9L7 120 aa16.32■□□□□ 0.2
TARBP1-201ENST00000040877 FAM19A4Q96LR4 140 aa16.31■□□□□ 0.2
TARBP1-201ENST00000040877 PRR15LQ9BU68 103 aa16.31■□□□□ 0.2
TARBP1-201ENST00000040877 K7ERS5 55 aa16.28■□□□□ 0.2
TARBP1-201ENST00000040877 PRR3P79522 188 aaKnown RBP16.28■□□□□ 0.2
TARBP1-201ENST00000040877 A0A087WVE0 104 aa16.28■□□□□ 0.2
TARBP1-201ENST00000040877 LINC01546A6NGU7 62 aa16.28■□□□□ 0.2
TARBP1-201ENST00000040877 A0A087WYN8 130 aa16.27■□□□□ 0.19
TARBP1-201ENST00000040877 AGRNO00468 2067 aa16.26■□□□□ 0.19
TARBP1-201ENST00000040877 PRR4Q16378 134 aa16.25■□□□□ 0.19
TARBP1-201ENST00000040877 SERP1Q9Y6X1 66 aa16.25■□□□□ 0.19
TARBP1-201ENST00000040877 TRAV7A0A075B6U4 112 aa16.24■□□□□ 0.19
TARBP1-201ENST00000040877 LINC01556Q5JQF7 62 aa16.24■□□□□ 0.19
TARBP1-201ENST00000040877 IGLV5-39A0A0G2JS06 123 aa16.23■□□□□ 0.19
TARBP1-201ENST00000040877 Q6ZRU5 148 aa16.23■□□□□ 0.19
TARBP1-201ENST00000040877 H3BNG1 76 aa16.23■□□□□ 0.19
TARBP1-201ENST00000040877 CDIP1Q9H305 208 aa16.22■□□□□ 0.19
TARBP1-201ENST00000040877 PKD1L2Q7Z442 2459 aa16.22■□□□□ 0.19
TARBP1-201ENST00000040877 LINC00315P59091 139 aa16.21■□□□□ 0.19
TARBP1-201ENST00000040877 Q9BRP9 147 aa16.21■□□□□ 0.19
TARBP1-201ENST00000040877 CELA1Q9UNI1 258 aa16.21■□□□□ 0.18
TARBP1-201ENST00000040877 A6NED7 52 aa16.2■□□□□ 0.18
TARBP1-201ENST00000040877 LINC00575Q6W349 94 aa16.2■□□□□ 0.18
TARBP1-201ENST00000040877 CIRBP-AS1Q8TBR5 109 aa16.19■□□□□ 0.18
TARBP1-201ENST00000040877 IGHV3OR16-9A0A0B4J2B5 98 aa16.19■□□□□ 0.18
TARBP1-201ENST00000040877 MTORP42345 2549 aa16.17■□□□□ 0.18
TARBP1-201ENST00000040877 KLK9Q2XQG4 91 aa16.16■□□□□ 0.18
TARBP1-201ENST00000040877 FAM30AQ9NZY2 134 aa16.15■□□□□ 0.18
TARBP1-201ENST00000040877 FASNP49327 2511 aaKnown RBP16.15■□□□□ 0.18
TARBP1-201ENST00000040877 FSHBP01225 129 aa16.14■□□□□ 0.17
TARBP1-201ENST00000040877 SOSTDC1Q6X4U4 206 aa16.14■□□□□ 0.17
TARBP1-201ENST00000040877 ESRGQ1W209 222 aa16.13■□□□□ 0.17
TARBP1-201ENST00000040877 LINC00337Q8N6G1 96 aa16.12■□□□□ 0.17
TARBP1-201ENST00000040877 TET2Q6N021 2002 aaPredicted RBP16.11■□□□□ 0.17
TARBP1-201ENST00000040877 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
TARBP1-201ENST00000040877 X6R8D5 127 aa16.1■□□□□ 0.17
TARBP1-201ENST00000040877 C22orf24Q9Y442 160 aa16.1■□□□□ 0.17
TARBP1-201ENST00000040877 IGLV5-45A0A087WSX0 123 aa16.09■□□□□ 0.17
TARBP1-201ENST00000040877 A0A087WSZ3 146 aa16.08■□□□□ 0.17
TARBP1-201ENST00000040877 MDFIQ99750 246 aa16.06■□□□□ 0.16
TARBP1-201ENST00000040877 PTPRBP23467 1997 aa16.06■□□□□ 0.16
TARBP1-201ENST00000040877 TRBV7-7A0A0K0K1E9 115 aa16.06■□□□□ 0.16
TARBP1-201ENST00000040877 IGHV6-1A0A0B4J1U7 121 aa16.06■□□□□ 0.16
TARBP1-201ENST00000040877 KRTAP24-1Q3LI83 254 aa16.06■□□□□ 0.16
TARBP1-201ENST00000040877 LINC00208Q96KT6 92 aa16.05■□□□□ 0.16
TARBP1-201ENST00000040877 Q8N3U1 123 aa16.04■□□□□ 0.16
TARBP1-201ENST00000040877 LIMD2Q9BT23 127 aa16.04■□□□□ 0.16
TARBP1-201ENST00000040877 LINC01547P58512 204 aaPredicted RBP16.03■□□□□ 0.16
TARBP1-201ENST00000040877 Q6ZVQ6 151 aa16.03■□□□□ 0.16
TARBP1-201ENST00000040877 SMCR5Q8TEV8 140 aa16.02■□□□□ 0.15
TARBP1-201ENST00000040877 LINC00846Q9NV44 126 aa16.01■□□□□ 0.15
TARBP1-201ENST00000040877 PMAIP1Q13794 54 aa16.01■□□□□ 0.15
TARBP1-201ENST00000040877 ANKRD17O75179 2603 aaKnown RBP16.01■□□□□ 0.15
TARBP1-201ENST00000040877 PRLHP81277 87 aa16.01■□□□□ 0.15
TARBP1-201ENST00000040877 SMCPP49901 116 aaPredicted RBP16■□□□□ 0.15
TARBP1-201ENST00000040877 CENPFP49454 3210 aa15.99■□□□□ 0.15
TARBP1-201ENST00000040877 COL27A1Q8IZC6 1860 aaPredicted RBP15.99■□□□□ 0.15
TARBP1-201ENST00000040877 TRBV7-6A0A0J9YX20 115 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms