RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
CX3CL1-201ENST00000006053 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
CX3CL1-201ENST00000006053 FAM19A3Q7Z5A8 133 aa7.45□□□□□ -1.22
CX3CL1-201ENST00000006053 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
CX3CL1-201ENST00000006053 COX7B2Q8TF08 81 aa7.45□□□□□ -1.22
CX3CL1-201ENST00000006053 A0A087WVE0 104 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 DNAL4O96015 105 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 FSHBP01225 129 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 RETNQ9HD89 108 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 TMEM86BQ8N661 226 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 CXCL5P42830 114 aa7.44□□□□□ -1.22
CX3CL1-201ENST00000006053 INAFM2P0DMQ5 153 aa7.43□□□□□ -1.22
CX3CL1-201ENST00000006053 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
CX3CL1-201ENST00000006053 C11orf68Q9H3H3 251 aaKnown RBP7.43□□□□□ -1.22
CX3CL1-201ENST00000006053 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 IGKV2-28A0A075B6P5 120 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 A0A087WYN8 130 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 IGKV2D-28P01615 120 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 PLA2G2AP14555 144 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 BRK1Q8WUW1 75 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 WFDC10AQ9H1F0 79 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 DEFB113Q30KQ7 82 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 SMR3AQ99954 134 aa7.42□□□□□ -1.22
CX3CL1-201ENST00000006053 ZNF469Q96JG9 3925 aaPredicted RBP7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 IGLV4-60A0A075B6I1 120 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 C14orf132Q9NPU4 83 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 PAX4O43316 350 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 PF4P02776 101 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 CCL18P55774 89 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 FAM222AQ5U5X8 452 aa7.41□□□□□ -1.22
CX3CL1-201ENST00000006053 CCL24O00175 119 aa7.4□□□□□ -1.22
CX3CL1-201ENST00000006053 FHL2Q14192 279 aa7.4□□□□□ -1.22
CX3CL1-201ENST00000006053 LECT2O14960 151 aa7.4□□□□□ -1.23
CX3CL1-201ENST00000006053 UPK3BQ9BT76 320 aa7.4□□□□□ -1.23
CX3CL1-201ENST00000006053 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
CX3CL1-201ENST00000006053 USP17L23D6RBM5 183 aa7.39□□□□□ -1.23
CX3CL1-201ENST00000006053 SLPIP03973 132 aa7.39□□□□□ -1.23
CX3CL1-201ENST00000006053 HIST1H4AP62805 103 aaKnown RBP7.39□□□□□ -1.23
CX3CL1-201ENST00000006053 CR1P17927 2039 aa7.39□□□□□ -1.23
CX3CL1-201ENST00000006053 ATRQ13535 2644 aa7.38□□□□□ -1.23
CX3CL1-201ENST00000006053 LINC01561Q8N1V8 128 aa7.38□□□□□ -1.23
CX3CL1-201ENST00000006053 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 C16orf74Q96GX8 76 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 NCR3O14931 201 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 C20orf197Q8N268 126 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 OVOL2Q9BRP0 275 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 PLAC8L1A1L4L8 177 aa7.37□□□□□ -1.23
CX3CL1-201ENST00000006053 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
CX3CL1-201ENST00000006053 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
CX3CL1-201ENST00000006053 F8P00451 2351 aa7.36□□□□□ -1.23
CX3CL1-201ENST00000006053 H0YGX0 51 aa7.36□□□□□ -1.23
CX3CL1-201ENST00000006053 CLPSL2Q6UWE3 100 aa7.36□□□□□ -1.23
CX3CL1-201ENST00000006053 IBA57-AS1B1ANH7 110 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 XCL1P47992 114 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 AKAP9Q99996 3911 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 DEFB130BP0DP73 79 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 DEFB130AP0DP74 79 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 LINC00846Q9NV44 126 aa7.35□□□□□ -1.23
CX3CL1-201ENST00000006053 A0A087WZ39 114 aa7.34□□□□□ -1.23
CX3CL1-201ENST00000006053 DNAJC9-AS1A6NH13 148 aa7.34□□□□□ -1.23
CX3CL1-201ENST00000006053 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
CX3CL1-201ENST00000006053 GHRHP01286 108 aa7.33□□□□□ -1.24
CX3CL1-201ENST00000006053 A0A096LPF7 62 aa7.33□□□□□ -1.24
CX3CL1-201ENST00000006053 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 NDUFC2O95298 119 aa7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 PRR3P79522 188 aaKnown RBP7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 HILS1P60008 231 aa7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 ORMDL1Q9P0S3 153 aa7.32□□□□□ -1.24
CX3CL1-201ENST00000006053 ESM1Q9NQ30 184 aa7.31□□□□□ -1.24
CX3CL1-201ENST00000006053 RNASE1P07998 156 aaKnown RBP7.31□□□□□ -1.24
CX3CL1-201ENST00000006053 WFDC9Q8NEX5 89 aa7.31□□□□□ -1.24
CX3CL1-201ENST00000006053 GYPEP15421 78 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 LINC00474Q9P2X8 69 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 SS18Q15532 418 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 CSNK1G2-AS1Q8NCQ2 148 aa7.3□□□□□ -1.24
CX3CL1-201ENST00000006053 CMC4P56277 68 aaPredicted RBP7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 Q6JHZ5 121 aa7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 OBSCN-AS1Q96MR7 158 aa7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
CX3CL1-201ENST00000006053 FP248Q71RG6 208 aaPredicted RBP7.28□□□□□ -1.24
CX3CL1-201ENST00000006053 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
CX3CL1-201ENST00000006053 C4orf48Q5BLP8 95 aa7.28□□□□□ -1.24
CX3CL1-201ENST00000006053 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.24
CX3CL1-201ENST00000006053 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
CX3CL1-201ENST00000006053 IGLV1-51P01701 117 aa7.27□□□□□ -1.25
CX3CL1-201ENST00000006053 LINC01006Q8NI28 216 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms