RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 ChodlQ9CXM0 273 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Il2raP01590 268 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Mrpl16Q99N93 251 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Znf474Q6V5K9 347 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 EtdQ80SW5 59 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Amn1B8JKV0 258 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Gm21974F6W3F3 119 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cr2P19070 1025 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Vdac2Q60930 295 aaKnown RBP9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Csf2rb2P26954 878 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ypel2Q65Z95 119 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ypel1Q9ESC7 118 aa9.97□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tmem167aQ9CR64 72 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tcrg-V5A0A0G2JGV5 113 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Hspe1Q64433 102 aaKnown RBP9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Dmrtc2Q8CGW9 370 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Obox1Q9D350 204 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Foxl1Q64731 336 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Plxna3P70208 1872 aa9.96□□□□□ -0.81
Trim56-201ENSMUST00000054384 Zfp72Q0VFY0 435 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trav6-1A0A075B5Z8 112 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm6793B2RXM2 351 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Lyzl4Q9D925 145 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 TtrP07309 147 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm17334Q8C6U3 126 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Fbxl15Q91W61 300 aa9.96□□□□□ -0.82
Trim56-201ENSMUST00000054384 Efnb3O35393 340 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ncoa6Q9JL19 2067 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Sh3bgrl3Q91VW3 93 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Sod1P08228 154 aaKnown RBP9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 RhogP84096 191 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Clec5aQ9R007 190 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ighv1-22A0A075B5U7 117 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 P01634 136 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist1h2bfP10853 126 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 C1ql4Q4ZJM9 238 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist1h2bbQ64475 126 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist1h2bkQ8CGP1 126 aaKnown RBP9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist1h2bpQ8CGP2 126 aaKnown RBP9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Pradc1Q9D9N8 188 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Plxnb1Q8CJH3 2119 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trav19A0A0B4J1K4 119 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Cox6b1P56391 86 aaKnown RBP9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 MlanaQ2TA50 113 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Cox7a2lQ61387 111 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Mgst3Q9CPU4 153 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Crybb3Q9JJU9 211 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm12355A2A4X6 163 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 NdpP48744 131 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Srsf3P84104 164 aaKnown RBP9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 LctF8VPT3 1931 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm11020F6ZGD5 61 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 PpyP10601 100 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Higd1aQ9JLR9 95 aa9.95□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm12845A0A0N4SUM5 588 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Zfp248Q640N4 576 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Q8VC23 124 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 2200002J24RikQ9D807 110 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Zdhhc16Q9ESG8 361 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ighv1-20A0A0A6YX66 117 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm10842Q3U587 122 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ss18l1Q8BW22 402 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ssbp1Q9CYR0 152 aaKnown RBP9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 SbpP15501 199 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Olfr748E9Q9Z0 307 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Fam19a2Q7TPG7 131 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rita1Q9D1H0 253 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Insl3O09107 122 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ssbp2Q9CYZ8 361 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rnf125Q9D9R0 233 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Spred3Q6P6N5 408 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv4-90A0A075B5L3 117 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist1h1tQ07133 208 aa9.94□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm21616B6ZB74 166 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 1500009C09RikD3YYW9 81 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Lamtor3O88653 124 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Mrps11Q9DCA2 191 aaKnown RBP9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv1-99F6XWB2 120 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm10645Q3UPY1 145 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm94Q3V2D2 93 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Chac1Q8R3J5 223 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 1700013G24RikQ9DAC6 286 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm29423A0A087WRM1 55 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ptprz1B9EKR1 2312 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm10767Q3TQP0 103 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rbm38Q62176 237 aaKnown RBP9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 AtraidQ6PGD0 223 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Plxnb3Q9QY40 1902 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ms4a12A0A087WSB9 263 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Pate2Q3UW31 111 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 5730522E02RikQ5SP45 163 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Q8VE95 218 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Vmn1r54Q9EPB8 315 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv4-53A0A0G2JFC6 119 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Pex7P97865 318 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Sdk1Q3UH53 2193 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Il19Q8CJ70 176 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Lyzl1Q9CPX3 148 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Pcp4P63054 62 aa9.93□□□□□ -0.82
Trim56-201ENSMUST00000054384 Mst1P26928 716 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms