RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
PHGDH-220ENST00000641570 DPM2O94777 84 aa8.69□□□□□ -1.02
PHGDH-220ENST00000641570 HERVK_113P61574 105 aa8.69□□□□□ -1.02
PHGDH-220ENST00000641570 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
PHGDH-220ENST00000641570 LINC00173Q6ZV60 143 aa8.69□□□□□ -1.02
PHGDH-220ENST00000641570 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
PHGDH-220ENST00000641570 PRSS2P07478 247 aa8.68□□□□□ -1.02
PHGDH-220ENST00000641570 IGKCP01834 107 aa8.67□□□□□ -1.02
PHGDH-220ENST00000641570 C3orf79P0CE67 100 aa8.67□□□□□ -1.02
PHGDH-220ENST00000641570 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
PHGDH-220ENST00000641570 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
PHGDH-220ENST00000641570 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
PHGDH-220ENST00000641570 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
PHGDH-220ENST00000641570 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
PHGDH-220ENST00000641570 HSBP1L1C9JCN9 74 aa8.66□□□□□ -1.02
PHGDH-220ENST00000641570 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
PHGDH-220ENST00000641570 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
PHGDH-220ENST00000641570 OR10D4PQ8NGN7 298 aa8.66□□□□□ -1.02
PHGDH-220ENST00000641570 FOXI1Q12951 378 aa8.65□□□□□ -1.02
PHGDH-220ENST00000641570 ODF1Q14990 250 aa8.65□□□□□ -1.02
PHGDH-220ENST00000641570 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
PHGDH-220ENST00000641570 A0A087WZ39 114 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 LECT2O14960 151 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
PHGDH-220ENST00000641570 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 CKS1BP61024 79 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
PHGDH-220ENST00000641570 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-220ENST00000641570 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
PHGDH-220ENST00000641570 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
PHGDH-220ENST00000641570 COX6A2Q02221 97 aa8.61□□□□□ -1.03
PHGDH-220ENST00000641570 HIGD2BQ4VC39 106 aa8.61□□□□□ -1.03
PHGDH-220ENST00000641570 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
PHGDH-220ENST00000641570 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
PHGDH-220ENST00000641570 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
PHGDH-220ENST00000641570 CXCL5P42830 114 aa8.59□□□□□ -1.03
PHGDH-220ENST00000641570 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
PHGDH-220ENST00000641570 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
PHGDH-220ENST00000641570 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-220ENST00000641570 A0A087WTM6 91 aa8.58□□□□□ -1.04
PHGDH-220ENST00000641570 NDUFA1O15239 70 aa8.58□□□□□ -1.04
PHGDH-220ENST00000641570 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
PHGDH-220ENST00000641570 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
PHGDH-220ENST00000641570 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-220ENST00000641570 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
PHGDH-220ENST00000641570 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
PHGDH-220ENST00000641570 VPS13DQ5THJ4 4388 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 F8WDY8 70 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 Q8IZM0 81 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 Q8N814 137 aa8.57□□□□□ -1.04
PHGDH-220ENST00000641570 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-220ENST00000641570 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
PHGDH-220ENST00000641570 RTL8CO15255 209 aa8.56□□□□□ -1.04
PHGDH-220ENST00000641570 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
PHGDH-220ENST00000641570 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-220ENST00000641570 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 S100A12P80511 92 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 TNP2Q05952 138 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
PHGDH-220ENST00000641570 KMT2AQ03164 3969 aa8.54□□□□□ -1.04
PHGDH-220ENST00000641570 LEPROTO15243 131 aa8.54□□□□□ -1.04
PHGDH-220ENST00000641570 NMUP48645 174 aa8.54□□□□□ -1.04
PHGDH-220ENST00000641570 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
PHGDH-220ENST00000641570 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 SYCNQ0VAF6 134 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-220ENST00000641570 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
PHGDH-220ENST00000641570 E9PLD3 99 aa8.52□□□□□ -1.05
PHGDH-220ENST00000641570 J3QQQ9 107 aa8.52□□□□□ -1.05
PHGDH-220ENST00000641570 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
PHGDH-220ENST00000641570 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
PHGDH-220ENST00000641570 STPG4Q8N801 248 aa8.52□□□□□ -1.05
PHGDH-220ENST00000641570 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 WFDC2Q14508 124 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
PHGDH-220ENST00000641570 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
PHGDH-220ENST00000641570 HERV-K104P63124 156 aa8.5□□□□□ -1.05
PHGDH-220ENST00000641570 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms